RNA–Protein interactions for RNA: ENST00000470399.1

TTC19-204, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 5

Gene TTC19, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-204ENST00000470399 ADGRF5Q8IZF2 1346 aa36.92■■■■□ 3.5
TTC19-204ENST00000470399 MARF1Q9Y4F3 1742 aaKnown RBP36.92■■■■□ 3.5
TTC19-204ENST00000470399 SPATA31E1Q6ZUB1 1445 aa36.92■■■■□ 3.5
TTC19-204ENST00000470399 KNDC1Q76NI1 1749 aa36.9■■■■□ 3.5
TTC19-204ENST00000470399 NGLY1Q96IV0 654 aa36.89■■■■□ 3.5
TTC19-204ENST00000470399 PXDNQ92626 1479 aa36.88■■■■□ 3.5
TTC19-204ENST00000470399 TECPR2O15040 1411 aa36.87■■■■□ 3.49
TTC19-204ENST00000470399 MYOM2P54296 1465 aa36.87■■■■□ 3.49
TTC19-204ENST00000470399 CCDC144AA2RUR9 1427 aa36.84■■■■□ 3.49
TTC19-204ENST00000470399 FMN2Q9NZ56 1722 aa36.82■■■■□ 3.48
TTC19-204ENST00000470399 PLEKHH1Q9ULM0 1364 aa36.8■■■■□ 3.48
TTC19-204ENST00000470399 ATRNO75882 1429 aa36.8■■■■□ 3.48
TTC19-204ENST00000470399 WAPLQ7Z5K2 1190 aa36.8■■■■□ 3.48
TTC19-204ENST00000470399 FNBP4Q8N3X1 1017 aaPredicted RBP36.8■■■■□ 3.48
TTC19-204ENST00000470399 USP21Q9UK80 565 aa36.8■■■■□ 3.48
TTC19-204ENST00000470399 ESCO1Q5FWF5 840 aa36.79■■■■□ 3.48
TTC19-204ENST00000470399 LRPPRCP42704 1394 aaKnown RBP36.78■■■■□ 3.48
TTC19-204ENST00000470399 RGL3Q3MIN7 710 aa36.78■■■■□ 3.48
TTC19-204ENST00000470399 PIK3C2GO75747 1445 aa36.77■■■■□ 3.48
TTC19-204ENST00000470399 NPHP3Q7Z494 1330 aa36.77■■■■□ 3.48
TTC19-204ENST00000470399 RGPD8O14715 1765 aaPredicted RBP36.76■■■■□ 3.48
TTC19-204ENST00000470399 STK26Q9P289 416 aa36.76■■■■□ 3.48
TTC19-204ENST00000470399 XPCQ01831 940 aaPredicted RBP36.75■■■■□ 3.47
TTC19-204ENST00000470399 ANKRD30BQ9BXX2 1392 aa36.75■■■■□ 3.47
TTC19-204ENST00000470399 TMEM132EQ6IEE7 984 aa36.74■■■■□ 3.47
TTC19-204ENST00000470399 MPHOSPH9Q99550 1183 aa36.74■■■■□ 3.47
TTC19-204ENST00000470399 ABCC11Q96J66 1382 aa36.74■■■■□ 3.47
TTC19-204ENST00000470399 FOXO3O43524 673 aa36.73■■■■□ 3.47
TTC19-204ENST00000470399 TRPC5Q9UL62 973 aaPredicted RBP36.73■■■■□ 3.47
TTC19-204ENST00000470399 BCL9LQ86UU0 1499 aa36.73■■■■□ 3.47
TTC19-204ENST00000470399 NUTM2FA1L443 756 aa36.72■■■■□ 3.47
TTC19-204ENST00000470399 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.7■■■■□ 3.47
TTC19-204ENST00000470399 KIF1AQ12756 1690 aa36.69■■■■□ 3.46
TTC19-204ENST00000470399 YTHDC2Q9H6S0 1430 aaKnown RBP36.68■■■■□ 3.46
TTC19-204ENST00000470399 ATAD2Q6PL18 1390 aa36.66■■■■□ 3.46
TTC19-204ENST00000470399 EP400Q96L91 3159 aa36.65■■■■□ 3.46
TTC19-204ENST00000470399 NRXN1Q9ULB1 1477 aa36.63■■■■□ 3.45
TTC19-204ENST00000470399 GLI3P10071 1580 aa36.59■■■■□ 3.45
TTC19-204ENST00000470399 USP32Q8NFA0 1604 aa36.59■■■■□ 3.45
TTC19-204ENST00000470399 SPATA31A3Q5VYP0 1347 aa36.58■■■■□ 3.45
TTC19-204ENST00000470399 SLIT2O94813 1529 aa36.57■■■■□ 3.44
TTC19-204ENST00000470399 ABCA3Q99758 1704 aa36.56■■■■□ 3.44
TTC19-204ENST00000470399 BRWD3Q6RI45 1802 aa36.55■■■■□ 3.44
TTC19-204ENST00000470399 C14orf93Q9H972 538 aaKnown RBP36.55■■■■□ 3.44
TTC19-204ENST00000470399 SIRT1Q96EB6 747 aa36.53■■■■□ 3.44
TTC19-204ENST00000470399 CFAP70Q5T0N1 1121 aa36.51■■■■□ 3.44
TTC19-204ENST00000470399 GJD4Q96KN9 370 aaPredicted RBP36.51■■■■□ 3.44
TTC19-204ENST00000470399 PLCH1Q4KWH8 1693 aa36.5■■■■□ 3.43
TTC19-204ENST00000470399 RALGAPBQ86X10 1494 aa36.49■■■■□ 3.43
TTC19-204ENST00000470399 KRT28Q7Z3Y7 464 aa36.48■■■■□ 3.43
TTC19-204ENST00000470399 SRCAPQ6ZRS2 3230 aa36.47■■■■□ 3.43
TTC19-204ENST00000470399 TNS3Q68CZ2 1445 aa36.47■■■■□ 3.43
TTC19-204ENST00000470399 UNC5CLQ8IV45 518 aa36.45■■■■□ 3.43
TTC19-204ENST00000470399 PHF8Q9UPP1 1060 aa36.44■■■■□ 3.42
TTC19-204ENST00000470399 DLC1Q96QB1 1528 aa36.44■■■■□ 3.42
TTC19-204ENST00000470399 DHX57Q6P158 1386 aaKnown RBP36.43■■■■□ 3.42
TTC19-204ENST00000470399 NWD2Q9ULI1 1742 aa36.43■■■■□ 3.42
TTC19-204ENST00000470399 ADGRB1O14514 1584 aa36.43■■■■□ 3.42
TTC19-204ENST00000470399 ADGRB2O60241 1585 aa36.42■■■■□ 3.42
TTC19-204ENST00000470399 TRPM3Q9HCF6 1732 aaPredicted RBP36.4■■■■□ 3.42
TTC19-204ENST00000470399 SAFB2Q14151 953 aaKnown RBP eCLIP36.4■■■■□ 3.42
TTC19-204ENST00000470399 PRAM1Q96QH2 718 aa36.4■■■■□ 3.42
TTC19-204ENST00000470399 CABLES1Q8TDN4 633 aa36.39■■■■□ 3.42
TTC19-204ENST00000470399 SBNO1A3KN83 1393 aa36.37■■■■□ 3.41
TTC19-204ENST00000470399 NRAPQ86VF7 1730 aa36.34■■■■□ 3.41
TTC19-204ENST00000470399 RAB3GAP2Q9H2M9 1393 aa36.34■■■■□ 3.41
TTC19-204ENST00000470399 ALS2Q96Q42 1657 aa36.33■■■■□ 3.41
TTC19-204ENST00000470399 ANKARQ7Z5J8 1434 aa36.32■■■■□ 3.4
TTC19-204ENST00000470399 CCDC125Q86Z20 511 aa36.31■■■■□ 3.4
TTC19-204ENST00000470399 PLEKHG5O94827 1062 aa36.3■■■■□ 3.4
TTC19-204ENST00000470399 PSME1Q06323 249 aa36.3■■■■□ 3.4
TTC19-204ENST00000470399 CRYBG1Q9Y4K1 1723 aa36.29■■■■□ 3.4
TTC19-204ENST00000470399 PMFBP1Q8TBY8 1022 aa36.29■■■■□ 3.4
TTC19-204ENST00000470399 ACIN1Q9UKV3 1341 aaKnown RBP36.29■■■■□ 3.4
TTC19-204ENST00000470399 VPS72Q15906 364 aa36.27■■■■□ 3.4
TTC19-204ENST00000470399 ARHGEF10O15013 1369 aa36.27■■■■□ 3.4
TTC19-204ENST00000470399 BLMP54132 1417 aaPredicted RBP36.26■■■■□ 3.4
TTC19-204ENST00000470399 ZRANB1Q9UGI0 708 aa36.26■■■■□ 3.4
TTC19-204ENST00000470399 PRR36Q9H6K5 1346 aa36.25■■■■□ 3.39
TTC19-204ENST00000470399 SEPT12Q8IYM1 358 aa36.24■■■■□ 3.39
TTC19-204ENST00000470399 POGKQ9P215 609 aa36.24■■■■□ 3.39
TTC19-204ENST00000470399 HAP1P54257 671 aaPredicted RBP36.23■■■■□ 3.39
TTC19-204ENST00000470399 LMOD2Q6P5Q4 547 aa36.22■■■■□ 3.39
TTC19-204ENST00000470399 HIRIP3Q9BW71 556 aaPredicted RBP36.22■■■■□ 3.39
TTC19-204ENST00000470399 TULP4Q9NRJ4 1543 aa36.22■■■■□ 3.39
TTC19-204ENST00000470399 ARHGEF28Q8N1W1 1705 aaKnown RBP36.22■■■■□ 3.39
TTC19-204ENST00000470399 FAM83GA6ND36 823 aa36.21■■■■□ 3.39
TTC19-204ENST00000470399 ONECUT3O60422 494 aaPredicted RBP36.21■■■■□ 3.39
TTC19-204ENST00000470399 TRAK1Q9UPV9 953 aa36.21■■■■□ 3.39
TTC19-204ENST00000470399 COL14A1Q05707 1796 aaKnown RBP36.18■■■■□ 3.38
TTC19-204ENST00000470399 DEFB132Q7Z7B7 95 aa36.18■■■■□ 3.38
TTC19-204ENST00000470399 MINK1Q8N4C8 1332 aaPredicted RBP36.17■■■■□ 3.38
TTC19-204ENST00000470399 KDM2AQ9Y2K7 1162 aa36.13■■■■□ 3.37
TTC19-204ENST00000470399 CCDC9Q9Y3X0 531 aaKnown RBP36.12■■■■□ 3.37
TTC19-204ENST00000470399 ITSN1Q15811 1721 aa36.11■■■■□ 3.37
TTC19-204ENST00000470399 DCAF11Q8TEB1 546 aa36.11■■■■□ 3.37
TTC19-204ENST00000470399 WASLO00401 505 aaPredicted RBP36.1■■■■□ 3.37
TTC19-204ENST00000470399 KRT27Q7Z3Y8 459 aa36.09■■■■□ 3.37
TTC19-204ENST00000470399 ATP7BP35670 1465 aa36.07■■■■□ 3.37
TTC19-204ENST00000470399 EIF3AQ14152 1382 aaKnown RBP36.07■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms