RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 ARHGEF28Q8N1W1 1705 aaKnown RBP9.9□□□□□ -0.83
PSMD4-210ENST00000470396 TRPM1Q7Z4N2 1603 aa9.89□□□□□ -0.83
PSMD4-210ENST00000470396 CDC42BPGQ6DT37 1551 aa9.89□□□□□ -0.83
PSMD4-210ENST00000470396 NBPF8Q3BBV2 869 aa9.89□□□□□ -0.83
PSMD4-210ENST00000470396 CADPS2Q86UW7 1296 aa9.88□□□□□ -0.83
PSMD4-210ENST00000470396 SIRT1Q96EB6 747 aa9.88□□□□□ -0.83
PSMD4-210ENST00000470396 C1orf167Q5SNV9 1468 aa9.87□□□□□ -0.83
PSMD4-210ENST00000470396 ATF3P18847 181 aa9.87□□□□□ -0.83
PSMD4-210ENST00000470396 BRINP3Q76B58 766 aa9.87□□□□□ -0.83
PSMD4-210ENST00000470396 PRAM1Q96QH2 718 aa9.87□□□□□ -0.83
PSMD4-210ENST00000470396 TRAK1Q9UPV9 953 aa9.87□□□□□ -0.83
PSMD4-210ENST00000470396 ADGRB2O60241 1585 aa9.86□□□□□ -0.83
PSMD4-210ENST00000470396 SAFB2Q14151 953 aaKnown RBP eCLIP9.86□□□□□ -0.83
PSMD4-210ENST00000470396 FMN2Q9NZ56 1722 aa9.86□□□□□ -0.83
PSMD4-210ENST00000470396 RGS17Q9UGC6 210 aaPredicted RBP9.86□□□□□ -0.83
PSMD4-210ENST00000470396 COL16A1Q07092 1604 aaPredicted RBP9.85□□□□□ -0.83
PSMD4-210ENST00000470396 AHDC1Q5TGY3 1603 aaPredicted RBP9.85□□□□□ -0.83
PSMD4-210ENST00000470396 PHF23Q9BUL5 403 aaPredicted RBP9.85□□□□□ -0.83
PSMD4-210ENST00000470396 TONSLQ96HA7 1378 aa9.85□□□□□ -0.83
PSMD4-210ENST00000470396 NHSL1Q5SYE7 1610 aa9.85□□□□□ -0.83
PSMD4-210ENST00000470396 USP32Q8NFA0 1604 aa9.85□□□□□ -0.83
PSMD4-210ENST00000470396 DDX17Q92841 729 aaKnown RBP9.84□□□□□ -0.83
PSMD4-210ENST00000470396 ORAI2Q96SN7 254 aa9.84□□□□□ -0.83
PSMD4-210ENST00000470396 GPRASP1Q5JY77 1395 aa9.84□□□□□ -0.83
PSMD4-210ENST00000470396 PHLPP1O60346 1717 aa9.84□□□□□ -0.83
PSMD4-210ENST00000470396 CLSPNQ9HAW4 1339 aa9.83□□□□□ -0.84
PSMD4-210ENST00000470396 RGPD8O14715 1765 aaPredicted RBP9.83□□□□□ -0.84
PSMD4-210ENST00000470396 HIRIP3Q9BW71 556 aaPredicted RBP9.83□□□□□ -0.84
PSMD4-210ENST00000470396 RALGAPBQ86X10 1494 aa9.83□□□□□ -0.84
PSMD4-210ENST00000470396 NUTM2FA1L443 756 aa9.82□□□□□ -0.84
PSMD4-210ENST00000470396 MINK1Q8N4C8 1332 aaPredicted RBP9.82□□□□□ -0.84
PSMD4-210ENST00000470396 ROCK2O75116 1388 aaKnown RBP9.81□□□□□ -0.84
PSMD4-210ENST00000470396 POGKQ9P215 609 aa9.81□□□□□ -0.84
PSMD4-210ENST00000470396 PRR36Q9H6K5 1346 aa9.81□□□□□ -0.84
PSMD4-210ENST00000470396 QRICH2Q9H0J4 1663 aa9.8□□□□□ -0.84
PSMD4-210ENST00000470396 PXDNQ92626 1479 aa9.79□□□□□ -0.84
PSMD4-210ENST00000470396 TULP4Q9NRJ4 1543 aa9.79□□□□□ -0.84
PSMD4-210ENST00000470396 CCER1Q8TC90 406 aaPredicted RBP9.79□□□□□ -0.84
PSMD4-210ENST00000470396 ATP7BP35670 1465 aa9.79□□□□□ -0.84
PSMD4-210ENST00000470396 WASLO00401 505 aaPredicted RBP9.78□□□□□ -0.84
PSMD4-210ENST00000470396 ESCO1Q5FWF5 840 aa9.78□□□□□ -0.84
PSMD4-210ENST00000470396 ANKARQ7Z5J8 1434 aa9.78□□□□□ -0.84
PSMD4-210ENST00000470396 SOS2Q07890 1332 aaPredicted RBP9.78□□□□□ -0.84
PSMD4-210ENST00000470396 CENPJQ9HC77 1338 aaPredicted RBP9.78□□□□□ -0.84
PSMD4-210ENST00000470396 SHPRHQ149N8 1683 aa9.77□□□□□ -0.84
PSMD4-210ENST00000470396 TOPAZ1Q8N9V7 1692 aa9.77□□□□□ -0.84
PSMD4-210ENST00000470396 KIF1AQ12756 1690 aa9.77□□□□□ -0.85
PSMD4-210ENST00000470396 LRP6O75581 1613 aa9.76□□□□□ -0.85
PSMD4-210ENST00000470396 FOXO3O43524 673 aa9.76□□□□□ -0.85
PSMD4-210ENST00000470396 XPCQ01831 940 aaPredicted RBP9.76□□□□□ -0.85
PSMD4-210ENST00000470396 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
PSMD4-210ENST00000470396 JCADQ9P266 1359 aa9.75□□□□□ -0.85
PSMD4-210ENST00000470396 POTEAQ6S8J7 498 aa9.75□□□□□ -0.85
PSMD4-210ENST00000470396 CDK19Q9BWU1 502 aa9.75□□□□□ -0.85
PSMD4-210ENST00000470396 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
PSMD4-210ENST00000470396 PNPLA6Q8IY17 1366 aa9.75□□□□□ -0.85
PSMD4-210ENST00000470396 TRPM3Q9HCF6 1732 aaPredicted RBP9.74□□□□□ -0.85
PSMD4-210ENST00000470396 NUDT16Q96DE0 195 aaKnown RBP9.74□□□□□ -0.85
PSMD4-210ENST00000470396 PHF8Q9UPP1 1060 aa9.74□□□□□ -0.85
PSMD4-210ENST00000470396 NPHP3Q7Z494 1330 aa9.74□□□□□ -0.85
PSMD4-210ENST00000470396 SBNO2Q9Y2G9 1366 aa9.74□□□□□ -0.85
PSMD4-210ENST00000470396 ITSN1Q15811 1721 aa9.73□□□□□ -0.85
PSMD4-210ENST00000470396 PMFBP1Q8TBY8 1022 aa9.73□□□□□ -0.85
PSMD4-210ENST00000470396 CABP2Q9NPB3 220 aa9.73□□□□□ -0.85
PSMD4-210ENST00000470396 EIF3AQ14152 1382 aaKnown RBP9.73□□□□□ -0.85
PSMD4-210ENST00000470396 COL22A1Q8NFW1 1626 aaPredicted RBP9.72□□□□□ -0.85
PSMD4-210ENST00000470396 LRRC59Q96AG4 307 aaKnown RBP9.72□□□□□ -0.85
PSMD4-210ENST00000470396 TESK2Q96S53 571 aa9.72□□□□□ -0.85
PSMD4-210ENST00000470396 POLR3AO14802 1390 aaPredicted RBP9.71□□□□□ -0.86
PSMD4-210ENST00000470396 USP47Q96K76 1375 aa9.71□□□□□ -0.86
PSMD4-210ENST00000470396 SRCAPQ6ZRS2 3230 aa9.71□□□□□ -0.86
PSMD4-210ENST00000470396 ALS2Q96Q42 1657 aa9.71□□□□□ -0.86
PSMD4-210ENST00000470396 ST20-MTHFSA0A0A6YYL1 179 aa9.7□□□□□ -0.86
PSMD4-210ENST00000470396 KRT28Q7Z3Y7 464 aa9.7□□□□□ -0.86
PSMD4-210ENST00000470396 SPATA31A6Q5VVP1 1343 aa9.7□□□□□ -0.86
PSMD4-210ENST00000470396 SPATA31A3Q5VYP0 1347 aa9.7□□□□□ -0.86
PSMD4-210ENST00000470396 TNS3Q68CZ2 1445 aa9.7□□□□□ -0.86
PSMD4-210ENST00000470396 PPIP5K1Q6PFW1 1433 aa9.7□□□□□ -0.86
PSMD4-210ENST00000470396 PLEKHG3A1L390 1219 aa9.69□□□□□ -0.86
PSMD4-210ENST00000470396 SBNO1A3KN83 1393 aa9.69□□□□□ -0.86
PSMD4-210ENST00000470396 SRPK2P78362 688 aaKnown RBP9.69□□□□□ -0.86
PSMD4-210ENST00000470396 EVC2Q86UK5 1308 aa9.69□□□□□ -0.86
PSMD4-210ENST00000470396 ABCA3Q99758 1704 aa9.69□□□□□ -0.86
PSMD4-210ENST00000470396 CCDC61Q9Y6R9 512 aa9.69□□□□□ -0.86
PSMD4-210ENST00000470396 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
PSMD4-210ENST00000470396 ACEP12821 1306 aa9.68□□□□□ -0.86
PSMD4-210ENST00000470396 CD163L1Q9NR16 1453 aa9.67□□□□□ -0.86
PSMD4-210ENST00000470396 NUTM2BA6NNL0 878 aaPredicted RBP9.67□□□□□ -0.86
PSMD4-210ENST00000470396 NUTM2EB1AL46 878 aaPredicted RBP9.67□□□□□ -0.86
PSMD4-210ENST00000470396 PSME1Q06323 249 aa9.67□□□□□ -0.86
PSMD4-210ENST00000470396 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
PSMD4-210ENST00000470396 CABP1Q9NZU7 370 aa9.67□□□□□ -0.86
PSMD4-210ENST00000470396 SSH2Q76I76 1423 aa9.66□□□□□ -0.86
PSMD4-210ENST00000470396 AKAP12Q02952 1782 aa9.66□□□□□ -0.86
PSMD4-210ENST00000470396 NGDNQ8NEJ9 315 aaKnown RBP9.66□□□□□ -0.86
PSMD4-210ENST00000470396 NRKQ7Z2Y5 1582 aa9.66□□□□□ -0.86
PSMD4-210ENST00000470396 CPSF1Q10570 1443 aaKnown RBP9.65□□□□□ -0.86
PSMD4-210ENST00000470396 MARF1Q9Y4F3 1742 aaKnown RBP9.65□□□□□ -0.86
PSMD4-210ENST00000470396 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
PSMD4-210ENST00000470396 USP6P35125 1406 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms