RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 MYO6Q9UM54 1294 aa7.49□□□□□ -1.21
CCDC144A-212ENST00000470068 CFTRP13569 1480 aa7.49□□□□□ -1.21
CCDC144A-212ENST00000470068 PLB1Q6P1J6 1458 aa7.49□□□□□ -1.21
CCDC144A-212ENST00000470068 NAP1L5Q96NT1 182 aaPredicted RBP7.49□□□□□ -1.21
CCDC144A-212ENST00000470068 CUL7Q14999 1698 aa7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 CCDC141Q6ZP82 1450 aa7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 CALRP27797 417 aaKnown RBP7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 GNAI1P63096 354 aa7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 TTLL12Q14166 644 aaPredicted RBP7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 NLRP2Q9NX02 1062 aa7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 U2SURPO15042 1029 aaKnown RBP7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 MBD3O95983 291 aa7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 R3HDM1Q15032 1099 aaKnown RBP7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 CEP89Q96ST8 783 aa7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 RAD54L2Q9Y4B4 1467 aa7.48□□□□□ -1.21
CCDC144A-212ENST00000470068 ZNF335Q9H4Z2 1342 aaPredicted RBP7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 ERC2O15083 957 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 TEX35Q5T0J7 233 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 SYNE3Q6ZMZ3 975 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 CIZ1Q9ULV3 898 aaPredicted RBP7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 GPRASP1Q5JY77 1395 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 PDCP20941 246 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 CHMP5Q9NZZ3 219 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 POLA1P09884 1462 aaPredicted RBP7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 LRRC9Q6ZRR7 1453 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 FAM83GA6ND36 823 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 ZKSCAN1P17029 563 aaPredicted RBP7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 DRC7Q8IY82 874 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 TFCP2L1Q9NZI6 479 aa7.47□□□□□ -1.21
CCDC144A-212ENST00000470068 ERC1Q8IUD2 1116 aa7.46□□□□□ -1.21
CCDC144A-212ENST00000470068 UBE2Q2Q8WVN8 375 aa7.46□□□□□ -1.21
CCDC144A-212ENST00000470068 ARGLU1Q9NWB6 273 aaPredicted RBP7.46□□□□□ -1.21
CCDC144A-212ENST00000470068 FGD5Q6ZNL6 1462 aa7.46□□□□□ -1.21
CCDC144A-212ENST00000470068 IPO7O95373 1038 aaKnown RBP7.46□□□□□ -1.22
CCDC144A-212ENST00000470068 PDE3AQ14432 1141 aa7.46□□□□□ -1.22
CCDC144A-212ENST00000470068 ATF5Q9Y2D1 282 aaPredicted RBP7.46□□□□□ -1.22
CCDC144A-212ENST00000470068 MAP3K9P80192 1104 aa7.46□□□□□ -1.22
CCDC144A-212ENST00000470068 HMGN5P82970 282 aaKnown RBP7.46□□□□□ -1.22
CCDC144A-212ENST00000470068 NEXNQ0ZGT2 675 aa7.46□□□□□ -1.22
CCDC144A-212ENST00000470068 NAT10Q9H0A0 1025 aaKnown RBP7.46□□□□□ -1.22
CCDC144A-212ENST00000470068 DIAPH3Q9NSV4 1193 aa7.46□□□□□ -1.22
CCDC144A-212ENST00000470068 RTN4Q9NQC3 1192 aaKnown RBP7.46□□□□□ -1.22
CCDC144A-212ENST00000470068 TOP2BQ02880 1626 aa7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 ABCC11Q96J66 1382 aa7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 NBR1Q14596 966 aa7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 NOM1Q5C9Z4 860 aaKnown RBP7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 ILDR2Q71H61 639 aa7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 NOL10Q9BSC4 688 aaKnown RBP7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 PSMA5P28066 241 aa7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 FRAT1Q92837 279 aaPredicted RBP7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 NSD2O96028 1365 aa7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 U2AF1L5P0DN76 240 aaPredicted RBP7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 U2AF1Q01081 240 aaKnown RBP eCLIP7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 MINK1Q8N4C8 1332 aaPredicted RBP7.45□□□□□ -1.22
CCDC144A-212ENST00000470068 WIZO95785 1651 aa7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 CCDC85CA6NKD9 419 aa7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 INTS3Q68E01 1043 aaKnown RBP7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 RUNDC1Q96C34 613 aa7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 PUS7Q96PZ0 661 aaKnown RBP7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 PDCL2Q8N4E4 241 aa7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 SRCIN1Q9C0H9 1055 aa7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 HDAC9Q9UKV0 1011 aa7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 COG3Q96JB2 828 aa7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 IGF1RP08069 1367 aa7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 ZNF692Q9BU19 519 aaPredicted RBP7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 USP47Q96K76 1375 aa7.44□□□□□ -1.22
CCDC144A-212ENST00000470068 NCOA2Q15596 1464 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 XBP1P17861 261 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 GCC1Q96CN9 775 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 PLEKHH1Q9ULM0 1364 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 KIF2AO00139 706 aaPredicted RBP7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 SLC52A1Q9NWF4 448 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 PEG3Q9GZU2 1588 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 GOLGA6L19H0YKK7 550 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 DHX16O60231 1041 aaKnown RBP7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 GNAI3P08754 354 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 AKAP17AQ02040 695 aaKnown RBP7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 HSP90AA2PQ14568 343 aaPredicted RBP7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 ANKRD1Q15327 319 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 CAGE1Q8TC20 777 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 FBXW7Q969H0 707 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 LUC7LQ9NQ29 371 aaKnown RBP7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 BIN2Q9UBW5 565 aaPredicted RBP7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 FHOD3Q2V2M9 1422 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 GRIN3BO60391 1043 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 GTPBP4Q9BZE4 634 aaKnown RBP7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 RBM19Q9Y4C8 960 aaKnown RBP7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 INSRP06213 1382 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 PRXQ9BXM0 1461 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 DNMBPQ6XZF7 1577 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 LAMC3Q9Y6N6 1575 aa7.43□□□□□ -1.22
CCDC144A-212ENST00000470068 TRIM29Q14134 588 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 ATAD2Q6PL18 1390 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 AMPHP49418 695 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 GORABQ5T7V8 394 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 PRKRIP1Q9H875 184 aaPredicted RBP7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 SLAIN2Q9P270 581 aa7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.42□□□□□ -1.22
CCDC144A-212ENST00000470068 AFF2P51816 1311 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms