RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 PLEKHH1Q9ULM0 1364 aa24.97■■□□□ 1.59
C4A-250ENST00000469975 LRPPRCP42704 1394 aaKnown RBP24.96■■□□□ 1.59
C4A-250ENST00000469975 ZNF772Q68DY9 489 aaPredicted RBP24.96■■□□□ 1.59
C4A-250ENST00000469975 TECPR2O15040 1411 aa24.95■■□□□ 1.58
C4A-250ENST00000469975 AFF2P51816 1311 aa24.94■■□□□ 1.58
C4A-250ENST00000469975 NUTM2FA1L443 756 aa24.93■■□□□ 1.58
C4A-250ENST00000469975 SOS2Q07890 1332 aaPredicted RBP24.92■■□□□ 1.58
C4A-250ENST00000469975 C8orf37Q96NL8 207 aa24.92■■□□□ 1.58
C4A-250ENST00000469975 YTHDC2Q9H6S0 1430 aaKnown RBP24.92■■□□□ 1.58
C4A-250ENST00000469975 ABCC11Q96J66 1382 aa24.91■■□□□ 1.58
C4A-250ENST00000469975 ESCO1Q5FWF5 840 aa24.9■■□□□ 1.58
C4A-250ENST00000469975 NRXN1Q9ULB1 1477 aa24.89■■□□□ 1.58
C4A-250ENST00000469975 FMN2Q9NZ56 1722 aa24.89■■□□□ 1.58
C4A-250ENST00000469975 CFAP70Q5T0N1 1121 aa24.89■■□□□ 1.58
C4A-250ENST00000469975 MYOM2P54296 1465 aa24.89■■□□□ 1.57
C4A-250ENST00000469975 ADAMTS2O95450 1211 aa24.88■■□□□ 1.57
C4A-250ENST00000469975 XPCQ01831 940 aaPredicted RBP24.88■■□□□ 1.57
C4A-250ENST00000469975 RGPD8O14715 1765 aaPredicted RBP24.88■■□□□ 1.57
C4A-250ENST00000469975 ACIN1Q9UKV3 1341 aaKnown RBP24.87■■□□□ 1.57
C4A-250ENST00000469975 C14orf93Q9H972 538 aaKnown RBP24.87■■□□□ 1.57
C4A-250ENST00000469975 PXDNQ92626 1479 aa24.86■■□□□ 1.57
C4A-250ENST00000469975 RXRBP28702 533 aa24.86■■□□□ 1.57
C4A-250ENST00000469975 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
C4A-250ENST00000469975 FOXO3O43524 673 aa24.83■■□□□ 1.57
C4A-250ENST00000469975 NPHP3Q7Z494 1330 aa24.82■■□□□ 1.56
C4A-250ENST00000469975 SAFB2Q14151 953 aaKnown RBP eCLIP24.81■■□□□ 1.56
C4A-250ENST00000469975 NGLY1Q96IV0 654 aa24.81■■□□□ 1.56
C4A-250ENST00000469975 QTRT2Q9H974 415 aaKnown RBP24.8■■□□□ 1.56
C4A-250ENST00000469975 DHX57Q6P158 1386 aaKnown RBP24.8■■□□□ 1.56
C4A-250ENST00000469975 MARF1Q9Y4F3 1742 aaKnown RBP24.78■■□□□ 1.56
C4A-250ENST00000469975 KDM2AQ9Y2K7 1162 aa24.78■■□□□ 1.56
C4A-250ENST00000469975 KIF1AQ12756 1690 aa24.78■■□□□ 1.56
C4A-250ENST00000469975 PRAM1Q96QH2 718 aa24.77■■□□□ 1.56
C4A-250ENST00000469975 RGS12O14924 1447 aa24.77■■□□□ 1.56
C4A-250ENST00000469975 CDK12Q9NYV4 1490 aaPredicted RBP24.77■■□□□ 1.56
C4A-250ENST00000469975 ADGRB1O14514 1584 aa24.76■■□□□ 1.55
C4A-250ENST00000469975 SIRT1Q96EB6 747 aa24.76■■□□□ 1.55
C4A-250ENST00000469975 UPF1Q92900 1129 aaKnown RBP eCLIP24.75■■□□□ 1.55
C4A-250ENST00000469975 RBM6P78332 1123 aaKnown RBP24.73■■□□□ 1.55
C4A-250ENST00000469975 DCAF11Q8TEB1 546 aa24.73■■□□□ 1.55
C4A-250ENST00000469975 USP32Q8NFA0 1604 aa24.72■■□□□ 1.55
C4A-250ENST00000469975 DLC1Q96QB1 1528 aa24.72■■□□□ 1.55
C4A-250ENST00000469975 USP21Q9UK80 565 aa24.72■■□□□ 1.55
C4A-250ENST00000469975 POGKQ9P215 609 aa24.7■■□□□ 1.54
C4A-250ENST00000469975 TRAK1Q9UPV9 953 aa24.7■■□□□ 1.54
C4A-250ENST00000469975 KRT28Q7Z3Y7 464 aa24.69■■□□□ 1.54
C4A-250ENST00000469975 PHF8Q9UPP1 1060 aa24.69■■□□□ 1.54
C4A-250ENST00000469975 SPATA31A3Q5VYP0 1347 aa24.68■■□□□ 1.54
C4A-250ENST00000469975 FNBP4Q8N3X1 1017 aaPredicted RBP24.68■■□□□ 1.54
C4A-250ENST00000469975 HRCP23327 699 aa24.67■■□□□ 1.54
C4A-250ENST00000469975 HIRIP3Q9BW71 556 aaPredicted RBP24.67■■□□□ 1.54
C4A-250ENST00000469975 ADGRB2O60241 1585 aa24.67■■□□□ 1.54
C4A-250ENST00000469975 PLEKHG5O94827 1062 aa24.66■■□□□ 1.54
C4A-250ENST00000469975 ATRNO75882 1429 aa24.66■■□□□ 1.54
C4A-250ENST00000469975 TRPC5Q9UL62 973 aaPredicted RBP24.65■■□□□ 1.54
C4A-250ENST00000469975 BCL9LQ86UU0 1499 aa24.64■■□□□ 1.54
C4A-250ENST00000469975 MINK1Q8N4C8 1332 aaPredicted RBP24.64■■□□□ 1.54
C4A-250ENST00000469975 ARHGEF28Q8N1W1 1705 aaKnown RBP24.64■■□□□ 1.53
C4A-250ENST00000469975 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
C4A-250ENST00000469975 ABCA3Q99758 1704 aa24.63■■□□□ 1.53
C4A-250ENST00000469975 TNS3Q68CZ2 1445 aa24.62■■□□□ 1.53
C4A-250ENST00000469975 CABLES1Q8TDN4 633 aa24.61■■□□□ 1.53
C4A-250ENST00000469975 ANKARQ7Z5J8 1434 aa24.6■■□□□ 1.53
C4A-250ENST00000469975 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.59■■□□□ 1.53
C4A-250ENST00000469975 PRR36Q9H6K5 1346 aa24.59■■□□□ 1.53
C4A-250ENST00000469975 TRPM3Q9HCF6 1732 aaPredicted RBP24.58■■□□□ 1.53
C4A-250ENST00000469975 PSME1Q06323 249 aa24.58■■□□□ 1.53
C4A-250ENST00000469975 LMOD2Q6P5Q4 547 aa24.58■■□□□ 1.53
C4A-250ENST00000469975 TULP4Q9NRJ4 1543 aa24.56■■□□□ 1.52
C4A-250ENST00000469975 PLCH1Q4KWH8 1693 aa24.56■■□□□ 1.52
C4A-250ENST00000469975 SLIT2O94813 1529 aa24.56■■□□□ 1.52
C4A-250ENST00000469975 SBNO1A3KN83 1393 aa24.55■■□□□ 1.52
C4A-250ENST00000469975 HAP1P54257 671 aaPredicted RBP24.54■■□□□ 1.52
C4A-250ENST00000469975 GLI3P10071 1580 aa24.54■■□□□ 1.52
C4A-250ENST00000469975 WASLO00401 505 aaPredicted RBP24.53■■□□□ 1.52
C4A-250ENST00000469975 STAC3Q96MF2 364 aa24.53■■□□□ 1.52
C4A-250ENST00000469975 ALS2Q96Q42 1657 aa24.53■■□□□ 1.52
C4A-250ENST00000469975 GJD4Q96KN9 370 aaPredicted RBP24.52■■□□□ 1.52
C4A-250ENST00000469975 UNC5CLQ8IV45 518 aa24.51■■□□□ 1.51
C4A-250ENST00000469975 KIAA1210Q9ULL0 1709 aa24.51■■□□□ 1.51
C4A-250ENST00000469975 ATAD2Q6PL18 1390 aa24.51■■□□□ 1.51
C4A-250ENST00000469975 RALGAPBQ86X10 1494 aa24.51■■□□□ 1.51
C4A-250ENST00000469975 ARHGEF10O15013 1369 aa24.5■■□□□ 1.51
C4A-250ENST00000469975 BRWD3Q6RI45 1802 aa24.49■■□□□ 1.51
C4A-250ENST00000469975 ITSN1Q15811 1721 aa24.49■■□□□ 1.51
C4A-250ENST00000469975 EIF3AQ14152 1382 aaKnown RBP24.48■■□□□ 1.51
C4A-250ENST00000469975 NWD2Q9ULI1 1742 aa24.48■■□□□ 1.51
C4A-250ENST00000469975 ATP7BP35670 1465 aa24.47■■□□□ 1.51
C4A-250ENST00000469975 NBPF1Q3BBV0 1214 aa24.47■■□□□ 1.51
C4A-250ENST00000469975 GPRASP1Q5JY77 1395 aa24.46■■□□□ 1.51
C4A-250ENST00000469975 CRYBG1Q9Y4K1 1723 aa24.46■■□□□ 1.51
C4A-250ENST00000469975 NGDNQ8NEJ9 315 aaKnown RBP24.45■■□□□ 1.5
C4A-250ENST00000469975 FAM83GA6ND36 823 aa24.44■■□□□ 1.5
C4A-250ENST00000469975 NUDT16Q96DE0 195 aaKnown RBP24.44■■□□□ 1.5
C4A-250ENST00000469975 NRAPQ86VF7 1730 aa24.44■■□□□ 1.5
C4A-250ENST00000469975 TOPAZ1Q8N9V7 1692 aa24.43■■□□□ 1.5
C4A-250ENST00000469975 PAK3O75914 559 aaPredicted RBP24.42■■□□□ 1.5
C4A-250ENST00000469975 CDK19Q9BWU1 502 aa24.42■■□□□ 1.5
C4A-250ENST00000469975 CCDC9Q9Y3X0 531 aaKnown RBP24.4■■□□□ 1.5
C4A-250ENST00000469975 EP400Q96L91 3159 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms