RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 LTBP4Q8N2S1 1624 aa29.13■■■□□ 2.25
BRAF-202ENST00000469930 PUS7Q96PZ0 661 aaKnown RBP29.13■■■□□ 2.25
BRAF-202ENST00000469930 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.13■■■□□ 2.25
BRAF-202ENST00000469930 LRRC7Q96NW7 1537 aa29.12■■■□□ 2.25
BRAF-202ENST00000469930 TMF1P82094 1093 aa29.1■■■□□ 2.25
BRAF-202ENST00000469930 ADGRL3Q9HAR2 1447 aa29.1■■■□□ 2.25
BRAF-202ENST00000469930 TMEM94Q12767 1356 aa29.09■■■□□ 2.25
BRAF-202ENST00000469930 HIRIP3Q9BW71 556 aaPredicted RBP29.08■■■□□ 2.25
BRAF-202ENST00000469930 EVC2Q86UK5 1308 aa29.08■■■□□ 2.25
BRAF-202ENST00000469930 SAFB2Q14151 953 aaKnown RBP eCLIP29.07■■■□□ 2.24
BRAF-202ENST00000469930 CDCA8Q53HL2 280 aa29.07■■■□□ 2.24
BRAF-202ENST00000469930 MINK1Q8N4C8 1332 aaPredicted RBP29.06■■■□□ 2.24
BRAF-202ENST00000469930 ZNF316A6NFI3 1004 aaPredicted RBP29.06■■■□□ 2.24
BRAF-202ENST00000469930 TULP4Q9NRJ4 1543 aa29.04■■■□□ 2.24
BRAF-202ENST00000469930 NALCNQ8IZF0 1738 aa29.04■■■□□ 2.24
BRAF-202ENST00000469930 WASLO00401 505 aaPredicted RBP29.04■■■□□ 2.24
BRAF-202ENST00000469930 C19orf44Q9H6X5 657 aa29.04■■■□□ 2.24
BRAF-202ENST00000469930 CDC42BPGQ6DT37 1551 aa29.04■■■□□ 2.24
BRAF-202ENST00000469930 DCCP43146 1447 aa29.03■■■□□ 2.24
BRAF-202ENST00000469930 XIRP1Q702N8 1843 aaKnown RBP29.03■■■□□ 2.24
BRAF-202ENST00000469930 DISP3Q9P2K9 1392 aa29.02■■■□□ 2.24
BRAF-202ENST00000469930 C11orf95C9JLR9 678 aaPredicted RBP29■■■□□ 2.23
BRAF-202ENST00000469930 CDK19Q9BWU1 502 aa28.99■■■□□ 2.23
BRAF-202ENST00000469930 CCDC7Q96M83 1385 aa28.97■■■□□ 2.23
BRAF-202ENST00000469930 RBM33Q96EV2 1170 aaKnown RBP28.96■■■□□ 2.23
BRAF-202ENST00000469930 MSH6P52701 1360 aa28.96■■■□□ 2.23
BRAF-202ENST00000469930 KIF7Q2M1P5 1343 aa28.95■■■□□ 2.23
BRAF-202ENST00000469930 ANKARQ7Z5J8 1434 aa28.95■■■□□ 2.23
BRAF-202ENST00000469930 C14orf37Q86TY3 774 aa28.95■■■□□ 2.22
BRAF-202ENST00000469930 ATAD2Q6PL18 1390 aa28.95■■■□□ 2.22
BRAF-202ENST00000469930 WASHC2AQ641Q2 1341 aa28.94■■■□□ 2.22
BRAF-202ENST00000469930 FMN2Q9NZ56 1722 aa28.94■■■□□ 2.22
BRAF-202ENST00000469930 IQSEC2Q5JU85 1478 aa28.94■■■□□ 2.22
BRAF-202ENST00000469930 CADPS2Q86UW7 1296 aa28.92■■■□□ 2.22
BRAF-202ENST00000469930 SRPK2P78362 688 aaKnown RBP28.91■■■□□ 2.22
BRAF-202ENST00000469930 NINLQ9Y2I6 1382 aa28.9■■■□□ 2.22
BRAF-202ENST00000469930 CABP2Q9NPB3 220 aa28.9■■■□□ 2.22
BRAF-202ENST00000469930 ATF3P18847 181 aa28.89■■■□□ 2.22
BRAF-202ENST00000469930 ATP7BP35670 1465 aa28.89■■■□□ 2.22
BRAF-202ENST00000469930 NUDT16Q96DE0 195 aaKnown RBP28.88■■■□□ 2.21
BRAF-202ENST00000469930 CCDC61Q9Y6R9 512 aa28.88■■■□□ 2.21
BRAF-202ENST00000469930 PRR36Q9H6K5 1346 aa28.87■■■□□ 2.21
BRAF-202ENST00000469930 USP32Q8NFA0 1604 aa28.87■■■□□ 2.21
BRAF-202ENST00000469930 MST1RQ04912 1400 aa28.84■■■□□ 2.21
BRAF-202ENST00000469930 FBXO41Q8TF61 875 aa28.83■■■□□ 2.21
BRAF-202ENST00000469930 TOPAZ1Q8N9V7 1692 aa28.83■■■□□ 2.21
BRAF-202ENST00000469930 PLEKHG3A1L390 1219 aa28.82■■■□□ 2.2
BRAF-202ENST00000469930 ITSN1Q15811 1721 aa28.82■■■□□ 2.2
BRAF-202ENST00000469930 C1orf167Q5SNV9 1468 aa28.81■■■□□ 2.2
BRAF-202ENST00000469930 MYOM1P52179 1685 aa28.8■■■□□ 2.2
BRAF-202ENST00000469930 CERKQ8TCT0 537 aa28.78■■■□□ 2.2
BRAF-202ENST00000469930 PPIP5K1Q6PFW1 1433 aa28.77■■■□□ 2.2
BRAF-202ENST00000469930 CABP1Q9NZU7 370 aa28.76■■■□□ 2.19
BRAF-202ENST00000469930 SLAIN2Q9P270 581 aa28.76■■■□□ 2.19
BRAF-202ENST00000469930 RGPD8O14715 1765 aaPredicted RBP28.75■■■□□ 2.19
BRAF-202ENST00000469930 SLC12A5Q9H2X9 1139 aa28.75■■■□□ 2.19
BRAF-202ENST00000469930 POLR3GLQ9BT43 218 aa28.74■■■□□ 2.19
BRAF-202ENST00000469930 POLR3AO14802 1390 aaPredicted RBP28.74■■■□□ 2.19
BRAF-202ENST00000469930 NUTM2FA1L443 756 aa28.73■■■□□ 2.19
BRAF-202ENST00000469930 CPSF1Q10570 1443 aaKnown RBP28.73■■■□□ 2.19
BRAF-202ENST00000469930 ANKRD36BQ8N2N9 1353 aa28.73■■■□□ 2.19
BRAF-202ENST00000469930 TMC1Q8TDI8 760 aa28.72■■■□□ 2.19
BRAF-202ENST00000469930 ZNF692Q9BU19 519 aaPredicted RBP28.72■■■□□ 2.19
BRAF-202ENST00000469930 TERF2IPQ9NYB0 399 aa28.72■■■□□ 2.19
BRAF-202ENST00000469930 PHF8Q9UPP1 1060 aa28.72■■■□□ 2.19
BRAF-202ENST00000469930 CD163L1Q9NR16 1453 aa28.72■■■□□ 2.19
BRAF-202ENST00000469930 KIF1AQ12756 1690 aa28.71■■■□□ 2.19
BRAF-202ENST00000469930 TOM1O60784 492 aa28.69■■■□□ 2.18
BRAF-202ENST00000469930 ESCO1Q5FWF5 840 aa28.69■■■□□ 2.18
BRAF-202ENST00000469930 BRD4O60885 1362 aaPredicted RBP28.68■■■□□ 2.18
BRAF-202ENST00000469930 ORAI2Q96SN7 254 aa28.68■■■□□ 2.18
BRAF-202ENST00000469930 PANK3Q9H999 370 aa28.68■■■□□ 2.18
BRAF-202ENST00000469930 DDX10Q13206 875 aaKnown RBP28.67■■■□□ 2.18
BRAF-202ENST00000469930 HDGFL2Q7Z4V5 671 aaPredicted RBP28.67■■■□□ 2.18
BRAF-202ENST00000469930 ACEP12821 1306 aa28.67■■■□□ 2.18
BRAF-202ENST00000469930 AKAP12Q02952 1782 aa28.66■■■□□ 2.18
BRAF-202ENST00000469930 A0A1W2PP64 1363 aa28.64■■■□□ 2.18
BRAF-202ENST00000469930 PER1O15534 1290 aaPredicted RBP28.64■■■□□ 2.18
BRAF-202ENST00000469930 BRINP3Q76B58 766 aa28.64■■■□□ 2.18
BRAF-202ENST00000469930 NGDNQ8NEJ9 315 aaKnown RBP28.63■■■□□ 2.17
BRAF-202ENST00000469930 PMFBP1Q8TBY8 1022 aa28.62■■■□□ 2.17
BRAF-202ENST00000469930 MON2Q7Z3U7 1717 aa28.61■■■□□ 2.17
BRAF-202ENST00000469930 CARD14Q9BXL6 1004 aa28.61■■■□□ 2.17
BRAF-202ENST00000469930 SSH2Q76I76 1423 aa28.6■■■□□ 2.17
BRAF-202ENST00000469930 KTN1Q86UP2 1357 aaKnown RBP28.6■■■□□ 2.17
BRAF-202ENST00000469930 USP6P35125 1406 aa28.6■■■□□ 2.17
BRAF-202ENST00000469930 EDC4Q6P2E9 1401 aaKnown RBP28.6■■■□□ 2.17
BRAF-202ENST00000469930 NPHP3Q7Z494 1330 aa28.58■■■□□ 2.17
BRAF-202ENST00000469930 UBAP1LF5GYI3 381 aa28.57■■■□□ 2.16
BRAF-202ENST00000469930 NPC1L1Q9UHC9 1359 aa28.56■■■□□ 2.16
BRAF-202ENST00000469930 FOXO3O43524 673 aa28.55■■■□□ 2.16
BRAF-202ENST00000469930 NHSL1Q5SYE7 1610 aa28.54■■■□□ 2.16
BRAF-202ENST00000469930 NRKQ7Z2Y5 1582 aa28.54■■■□□ 2.16
BRAF-202ENST00000469930 KNSTRNQ9Y448 316 aa28.54■■■□□ 2.16
BRAF-202ENST00000469930 ROBO1Q9Y6N7 1651 aa28.54■■■□□ 2.16
BRAF-202ENST00000469930 NSD3Q9BZ95 1437 aa28.53■■■□□ 2.16
BRAF-202ENST00000469930 TTC21AQ8NDW8 1320 aa28.53■■■□□ 2.16
BRAF-202ENST00000469930 PSME1Q06323 249 aa28.53■■■□□ 2.16
BRAF-202ENST00000469930 SOS2Q07890 1332 aaPredicted RBP28.52■■■□□ 2.16
BRAF-202ENST00000469930 AHDC1Q5TGY3 1603 aaPredicted RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms