RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 ZNF772Q68DY9 489 aaPredicted RBP17.03■□□□□ 0.32
FAM228B-203ENST00000469867 PIK3C2GO75747 1445 aa17.02■□□□□ 0.32
FAM228B-203ENST00000469867 IFT172Q9UG01 1749 aa17.02■□□□□ 0.32
FAM228B-203ENST00000469867 ESCO1Q5FWF5 840 aa17.02■□□□□ 0.31
FAM228B-203ENST00000469867 C8orf37Q96NL8 207 aa17.02■□□□□ 0.31
FAM228B-203ENST00000469867 PNPLA6Q8IY17 1366 aa17.02■□□□□ 0.31
FAM228B-203ENST00000469867 AFF2P51816 1311 aa17■□□□□ 0.31
FAM228B-203ENST00000469867 PLEKHH1Q9ULM0 1364 aa17■□□□□ 0.31
FAM228B-203ENST00000469867 ADAMTS2O95450 1211 aa17■□□□□ 0.31
FAM228B-203ENST00000469867 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
FAM228B-203ENST00000469867 XPCQ01831 940 aaPredicted RBP16.99■□□□□ 0.31
FAM228B-203ENST00000469867 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
FAM228B-203ENST00000469867 FOXO3O43524 673 aa16.98■□□□□ 0.31
FAM228B-203ENST00000469867 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
FAM228B-203ENST00000469867 ACIN1Q9UKV3 1341 aaKnown RBP16.98■□□□□ 0.31
FAM228B-203ENST00000469867 EP400Q96L91 3159 aa16.98■□□□□ 0.31
FAM228B-203ENST00000469867 TECPR2O15040 1411 aa16.98■□□□□ 0.31
FAM228B-203ENST00000469867 ABCC11Q96J66 1382 aa16.98■□□□□ 0.31
FAM228B-203ENST00000469867 YTHDC2Q9H6S0 1430 aaKnown RBP16.97■□□□□ 0.31
FAM228B-203ENST00000469867 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
FAM228B-203ENST00000469867 RXRBP28702 533 aa16.96■□□□□ 0.31
FAM228B-203ENST00000469867 SAFB2Q14151 953 aaKnown RBP eCLIP16.96■□□□□ 0.31
FAM228B-203ENST00000469867 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
FAM228B-203ENST00000469867 NGLY1Q96IV0 654 aa16.95■□□□□ 0.3
FAM228B-203ENST00000469867 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
FAM228B-203ENST00000469867 NPHP3Q7Z494 1330 aa16.95■□□□□ 0.3
FAM228B-203ENST00000469867 NEUROD1Q13562 356 aa16.94■□□□□ 0.3
FAM228B-203ENST00000469867 LAMC1P11047 1609 aa16.94■□□□□ 0.3
FAM228B-203ENST00000469867 KDM2AQ9Y2K7 1162 aa16.93■□□□□ 0.3
FAM228B-203ENST00000469867 QTRT2Q9H974 415 aaKnown RBP16.93■□□□□ 0.3
FAM228B-203ENST00000469867 NRXN1Q9ULB1 1477 aa16.92■□□□□ 0.3
FAM228B-203ENST00000469867 MYOM2P54296 1465 aa16.91■□□□□ 0.3
FAM228B-203ENST00000469867 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
FAM228B-203ENST00000469867 DHX57Q6P158 1386 aaKnown RBP16.91■□□□□ 0.3
FAM228B-203ENST00000469867 KNDC1Q76NI1 1749 aa16.91■□□□□ 0.3
FAM228B-203ENST00000469867 DCAF11Q8TEB1 546 aa16.91■□□□□ 0.3
FAM228B-203ENST00000469867 PXDNQ92626 1479 aa16.9■□□□□ 0.3
FAM228B-203ENST00000469867 POGKQ9P215 609 aa16.88■□□□□ 0.29
FAM228B-203ENST00000469867 RBM6P78332 1123 aaKnown RBP16.87■□□□□ 0.29
FAM228B-203ENST00000469867 USP21Q9UK80 565 aa16.87■□□□□ 0.29
FAM228B-203ENST00000469867 TRAK1Q9UPV9 953 aa16.87■□□□□ 0.29
FAM228B-203ENST00000469867 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
FAM228B-203ENST00000469867 UPF1Q92900 1129 aaKnown RBP eCLIP16.87■□□□□ 0.29
FAM228B-203ENST00000469867 SIRT1Q96EB6 747 aa16.87■□□□□ 0.29
FAM228B-203ENST00000469867 FMN2Q9NZ56 1722 aa16.86■□□□□ 0.29
FAM228B-203ENST00000469867 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
FAM228B-203ENST00000469867 HIRIP3Q9BW71 556 aaPredicted RBP16.86■□□□□ 0.29
FAM228B-203ENST00000469867 RGPD8O14715 1765 aaPredicted RBP16.85■□□□□ 0.29
FAM228B-203ENST00000469867 RGS12O14924 1447 aa16.84■□□□□ 0.29
FAM228B-203ENST00000469867 PHF8Q9UPP1 1060 aa16.84■□□□□ 0.29
FAM228B-203ENST00000469867 CDK12Q9NYV4 1490 aaPredicted RBP16.84■□□□□ 0.29
FAM228B-203ENST00000469867 KRT28Q7Z3Y7 464 aa16.84■□□□□ 0.29
FAM228B-203ENST00000469867 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
FAM228B-203ENST00000469867 COL22A1Q8NFW1 1626 aaPredicted RBP16.83■□□□□ 0.29
FAM228B-203ENST00000469867 ADGRB1O14514 1584 aa16.83■□□□□ 0.28
FAM228B-203ENST00000469867 PMFBP1Q8TBY8 1022 aa16.82■□□□□ 0.28
FAM228B-203ENST00000469867 SPATA31A3Q5VYP0 1347 aa16.82■□□□□ 0.28
FAM228B-203ENST00000469867 GTF3C3Q9Y5Q9 886 aa16.82■□□□□ 0.28
FAM228B-203ENST00000469867 LMOD2Q6P5Q4 547 aa16.81■□□□□ 0.28
FAM228B-203ENST00000469867 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
FAM228B-203ENST00000469867 TRPC5Q9UL62 973 aaPredicted RBP16.81■□□□□ 0.28
FAM228B-203ENST00000469867 CABLES1Q8TDN4 633 aa16.8■□□□□ 0.28
FAM228B-203ENST00000469867 KIF1AQ12756 1690 aa16.79■□□□□ 0.28
FAM228B-203ENST00000469867 PSME1Q06323 249 aa16.79■□□□□ 0.28
FAM228B-203ENST00000469867 DLC1Q96QB1 1528 aa16.79■□□□□ 0.28
FAM228B-203ENST00000469867 BCL9LQ86UU0 1499 aa16.79■□□□□ 0.28
FAM228B-203ENST00000469867 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
FAM228B-203ENST00000469867 TNS3Q68CZ2 1445 aa16.76■□□□□ 0.27
FAM228B-203ENST00000469867 ATRNO75882 1429 aa16.76■□□□□ 0.27
FAM228B-203ENST00000469867 USP32Q8NFA0 1604 aa16.76■□□□□ 0.27
FAM228B-203ENST00000469867 STAC3Q96MF2 364 aa16.76■□□□□ 0.27
FAM228B-203ENST00000469867 MARF1Q9Y4F3 1742 aaKnown RBP16.75■□□□□ 0.27
FAM228B-203ENST00000469867 PRR36Q9H6K5 1346 aa16.75■□□□□ 0.27
FAM228B-203ENST00000469867 WASLO00401 505 aaPredicted RBP16.74■□□□□ 0.27
FAM228B-203ENST00000469867 GJD4Q96KN9 370 aaPredicted RBP16.74■□□□□ 0.27
FAM228B-203ENST00000469867 ANKARQ7Z5J8 1434 aa16.74■□□□□ 0.27
FAM228B-203ENST00000469867 ADGRB2O60241 1585 aa16.74■□□□□ 0.27
FAM228B-203ENST00000469867 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
FAM228B-203ENST00000469867 SBNO1A3KN83 1393 aa16.71■□□□□ 0.27
FAM228B-203ENST00000469867 SLIT2O94813 1529 aa16.71■□□□□ 0.27
FAM228B-203ENST00000469867 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.26
FAM228B-203ENST00000469867 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.26
FAM228B-203ENST00000469867 ARHGEF10O15013 1369 aa16.7■□□□□ 0.26
FAM228B-203ENST00000469867 GPRASP1Q5JY77 1395 aa16.7■□□□□ 0.26
FAM228B-203ENST00000469867 ATAD2Q6PL18 1390 aa16.7■□□□□ 0.26
FAM228B-203ENST00000469867 TULP4Q9NRJ4 1543 aa16.69■□□□□ 0.26
FAM228B-203ENST00000469867 ARHGEF28Q8N1W1 1705 aaKnown RBP16.69■□□□□ 0.26
FAM228B-203ENST00000469867 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
FAM228B-203ENST00000469867 EIF3AQ14152 1382 aaKnown RBP16.68■□□□□ 0.26
FAM228B-203ENST00000469867 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
FAM228B-203ENST00000469867 FAM83GA6ND36 823 aa16.68■□□□□ 0.26
FAM228B-203ENST00000469867 CCDC9Q9Y3X0 531 aaKnown RBP16.68■□□□□ 0.26
FAM228B-203ENST00000469867 NUDT16Q96DE0 195 aaKnown RBP16.67■□□□□ 0.26
FAM228B-203ENST00000469867 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
FAM228B-203ENST00000469867 ATP7BP35670 1465 aa16.65■□□□□ 0.26
FAM228B-203ENST00000469867 GLI3P10071 1580 aa16.65■□□□□ 0.26
FAM228B-203ENST00000469867 ABCA3Q99758 1704 aa16.65■□□□□ 0.26
FAM228B-203ENST00000469867 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
FAM228B-203ENST00000469867 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
FAM228B-203ENST00000469867 SIN3AQ96ST3 1273 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms