RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
CBX6-203ENST00000469420 DIP2BQ9P265 1576 aa22.3■■□□□ 1.16
CBX6-203ENST00000469420 PDE4AP27815 886 aa22.3■■□□□ 1.16
CBX6-203ENST00000469420 TMEM131LA2VDJ0 1609 aa22.3■■□□□ 1.16
CBX6-203ENST00000469420 SHPRHQ149N8 1683 aa22.29■■□□□ 1.16
CBX6-203ENST00000469420 MS4A1P11836 297 aa22.28■■□□□ 1.16
CBX6-203ENST00000469420 TRMT2AQ8IZ69 625 aaKnown RBP22.28■■□□□ 1.16
CBX6-203ENST00000469420 NKTRP30414 1462 aaKnown RBP22.27■■□□□ 1.16
CBX6-203ENST00000469420 BACH2Q9BYV9 841 aa22.27■■□□□ 1.16
CBX6-203ENST00000469420 POLR3AO14802 1390 aaPredicted RBP22.26■■□□□ 1.15
CBX6-203ENST00000469420 NPM2Q86SE8 214 aaKnown RBP22.26■■□□□ 1.15
CBX6-203ENST00000469420 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
CBX6-203ENST00000469420 DMRT2Q9Y5R5 561 aa22.25■■□□□ 1.15
CBX6-203ENST00000469420 USP32Q8NFA0 1604 aa22.24■■□□□ 1.15
CBX6-203ENST00000469420 VGFO15240 615 aaPredicted RBP22.24■■□□□ 1.15
CBX6-203ENST00000469420 TNNT2P45379 298 aaPredicted RBP22.23■■□□□ 1.15
CBX6-203ENST00000469420 FAM69CQ0P6D2 419 aa22.23■■□□□ 1.15
CBX6-203ENST00000469420 FBXO31Q5XUX0 539 aaPredicted RBP22.23■■□□□ 1.15
CBX6-203ENST00000469420 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.23■■□□□ 1.15
CBX6-203ENST00000469420 ZBTB47Q9UFB7 747 aaPredicted RBP22.23■■□□□ 1.15
CBX6-203ENST00000469420 MORC1Q86VD1 984 aa22.22■■□□□ 1.15
CBX6-203ENST00000469420 E9PSI1 815 aa22.21■■□□□ 1.15
CBX6-203ENST00000469420 ZFYVE9O95405 1425 aa22.21■■□□□ 1.15
CBX6-203ENST00000469420 SAFB2Q14151 953 aaKnown RBP eCLIP22.2■■□□□ 1.14
CBX6-203ENST00000469420 NBR1Q14596 966 aa22.2■■□□□ 1.14
CBX6-203ENST00000469420 SLC52A1Q9NWF4 448 aa22.19■■□□□ 1.14
CBX6-203ENST00000469420 BCAR3O75815 825 aa22.18■■□□□ 1.14
CBX6-203ENST00000469420 CENPQQ7L2Z9 268 aaPredicted RBP22.18■■□□□ 1.14
CBX6-203ENST00000469420 CABP2Q9NPB3 220 aa22.18■■□□□ 1.14
CBX6-203ENST00000469420 CLTCQ00610 1675 aaKnown RBP22.17■■□□□ 1.14
CBX6-203ENST00000469420 STK26Q9P289 416 aa22.16■■□□□ 1.14
CBX6-203ENST00000469420 PTPRMP28827 1452 aa22.16■■□□□ 1.14
CBX6-203ENST00000469420 IQSEC2Q5JU85 1478 aa22.16■■□□□ 1.14
CBX6-203ENST00000469420 WWC1Q8IX03 1113 aa22.15■■□□□ 1.14
CBX6-203ENST00000469420 NGEFQ8N5V2 710 aa22.15■■□□□ 1.14
CBX6-203ENST00000469420 CGNL1Q0VF96 1302 aa22.15■■□□□ 1.14
CBX6-203ENST00000469420 EVC2Q86UK5 1308 aa22.15■■□□□ 1.14
CBX6-203ENST00000469420 ANKRD36BQ8N2N9 1353 aa22.13■■□□□ 1.13
CBX6-203ENST00000469420 RRP7AQ9Y3A4 280 aaKnown RBP22.12■■□□□ 1.13
CBX6-203ENST00000469420 MTHFSP49914 203 aa22.11■■□□□ 1.13
CBX6-203ENST00000469420 NEUROD2Q15784 382 aa22.11■■□□□ 1.13
CBX6-203ENST00000469420 REREQ9P2R6 1566 aa22.11■■□□□ 1.13
CBX6-203ENST00000469420 ALKQ9UM73 1620 aa22.11■■□□□ 1.13
CBX6-203ENST00000469420 RUNDC1Q96C34 613 aa22.1■■□□□ 1.13
CBX6-203ENST00000469420 PUS7Q96PZ0 661 aaKnown RBP22.1■■□□□ 1.13
CBX6-203ENST00000469420 YTHDC2Q9H6S0 1430 aaKnown RBP22.09■■□□□ 1.13
CBX6-203ENST00000469420 AGLP35573 1532 aa22.09■■□□□ 1.13
CBX6-203ENST00000469420 A0A1W2PP64 1363 aa22.08■■□□□ 1.13
CBX6-203ENST00000469420 TCP11L2Q8N4U5 519 aa22.08■■□□□ 1.13
CBX6-203ENST00000469420 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.12
CBX6-203ENST00000469420 SETD1AO15047 1707 aaKnown RBP22.07■■□□□ 1.12
CBX6-203ENST00000469420 MINK1Q8N4C8 1332 aaPredicted RBP22.07■■□□□ 1.12
CBX6-203ENST00000469420 NSD2O96028 1365 aa22.07■■□□□ 1.12
CBX6-203ENST00000469420 CD163L1Q9NR16 1453 aa22.06■■□□□ 1.12
CBX6-203ENST00000469420 PRAM1Q96QH2 718 aa22.06■■□□□ 1.12
CBX6-203ENST00000469420 CFAP53Q96M91 514 aa22.06■■□□□ 1.12
CBX6-203ENST00000469420 SPATA31D1Q6ZQQ2 1576 aa22.04■■□□□ 1.12
CBX6-203ENST00000469420 PHF23Q9BUL5 403 aaPredicted RBP22.04■■□□□ 1.12
CBX6-203ENST00000469420 ANKRD26Q9UPS8 1709 aa22.04■■□□□ 1.12
CBX6-203ENST00000469420 SRPK2P78362 688 aaKnown RBP22.03■■□□□ 1.12
CBX6-203ENST00000469420 A2ML1A8K2U0 1454 aa22.03■■□□□ 1.12
CBX6-203ENST00000469420 CANXP27824 592 aaKnown RBP22.03■■□□□ 1.12
CBX6-203ENST00000469420 DEKP35659 375 aaKnown RBP22.03■■□□□ 1.12
CBX6-203ENST00000469420 ABCC11Q96J66 1382 aa22.02■■□□□ 1.12
CBX6-203ENST00000469420 NINLQ9Y2I6 1382 aa22.02■■□□□ 1.12
CBX6-203ENST00000469420 RGS3P49796 1198 aa22.02■■□□□ 1.12
CBX6-203ENST00000469420 MLECQ14165 292 aa22.02■■□□□ 1.11
CBX6-203ENST00000469420 PDE3AQ14432 1141 aa22.02■■□□□ 1.11
CBX6-203ENST00000469420 PANK1Q8TE04 598 aa22.02■■□□□ 1.11
CBX6-203ENST00000469420 ADGRB2O60241 1585 aa22.01■■□□□ 1.11
CBX6-203ENST00000469420 C8orf34Q49A92 452 aa22.01■■□□□ 1.11
CBX6-203ENST00000469420 NLRP1Q9C000 1473 aa22■■□□□ 1.11
CBX6-203ENST00000469420 FAM161AQ3B820 660 aa22■■□□□ 1.11
CBX6-203ENST00000469420 BCL11AQ9H165 835 aa22■■□□□ 1.11
CBX6-203ENST00000469420 COG6Q9Y2V7 657 aa22■■□□□ 1.11
CBX6-203ENST00000469420 ARHGEF40Q8TER5 1519 aa22■■□□□ 1.11
CBX6-203ENST00000469420 FRAT1Q92837 279 aaPredicted RBP21.99■■□□□ 1.11
CBX6-203ENST00000469420 IGHDP01880 384 aa21.99■■□□□ 1.11
CBX6-203ENST00000469420 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
CBX6-203ENST00000469420 RARSP54136 660 aaKnown RBP21.99■■□□□ 1.11
CBX6-203ENST00000469420 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
CBX6-203ENST00000469420 GGNBP2Q9H3C7 697 aa21.99■■□□□ 1.11
CBX6-203ENST00000469420 WDR63Q8IWG1 891 aa21.98■■□□□ 1.11
CBX6-203ENST00000469420 LAS1LQ9Y4W2 734 aaKnown RBP21.98■■□□□ 1.11
CBX6-203ENST00000469420 NRXN3Q9Y4C0 1643 aa21.98■■□□□ 1.11
CBX6-203ENST00000469420 POGKQ9P215 609 aa21.98■■□□□ 1.11
CBX6-203ENST00000469420 CCDC27Q2M243 656 aa21.97■■□□□ 1.11
CBX6-203ENST00000469420 RTL5Q5HYW3 569 aaPredicted RBP21.97■■□□□ 1.11
CBX6-203ENST00000469420 STAG3Q9UJ98 1225 aa21.97■■□□□ 1.11
CBX6-203ENST00000469420 COL3A1P02461 1466 aaPredicted RBP21.97■■□□□ 1.11
CBX6-203ENST00000469420 CLUAP1Q96AJ1 413 aa21.96■■□□□ 1.11
CBX6-203ENST00000469420 KIF20BQ96Q89 1820 aa21.96■■□□□ 1.11
CBX6-203ENST00000469420 VIRMAQ69YN4 1812 aaKnown RBP21.95■■□□□ 1.11
CBX6-203ENST00000469420 RIMS2Q9UQ26 1411 aa21.95■■□□□ 1.11
CBX6-203ENST00000469420 DDRGK1Q96HY6 314 aa21.95■■□□□ 1.1
CBX6-203ENST00000469420 BCL2L13Q9BXK5 485 aa21.95■■□□□ 1.1
CBX6-203ENST00000469420 ATAD2Q6PL18 1390 aa21.95■■□□□ 1.1
CBX6-203ENST00000469420 FYB1O15117 783 aa21.95■■□□□ 1.1
CBX6-203ENST00000469420 CDK19Q9BWU1 502 aa21.95■■□□□ 1.1
CBX6-203ENST00000469420 WAPLQ7Z5K2 1190 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms