RNA–Protein interactions for RNA: ENST00000469330.5

TSPAN1-203, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 890 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-203ENST00000469330 NRXN3Q9Y4C0 1643 aa11.55□□□□□ -0.56
TSPAN1-203ENST00000469330 CNKSR2Q8WXI2 1034 aa11.54□□□□□ -0.56
TSPAN1-203ENST00000469330 MPHOSPH9Q99550 1183 aa11.53□□□□□ -0.56
TSPAN1-203ENST00000469330 NEXMIFQ5QGS0 1516 aa11.53□□□□□ -0.56
TSPAN1-203ENST00000469330 CLTCL1P53675 1640 aa11.53□□□□□ -0.56
TSPAN1-203ENST00000469330 ADGRL3Q9HAR2 1447 aa11.52□□□□□ -0.56
TSPAN1-203ENST00000469330 ADAMTS2O95450 1211 aa11.52□□□□□ -0.57
TSPAN1-203ENST00000469330 NGLY1Q96IV0 654 aa11.51□□□□□ -0.57
TSPAN1-203ENST00000469330 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
TSPAN1-203ENST00000469330 NALCNQ8IZF0 1738 aa11.51□□□□□ -0.57
TSPAN1-203ENST00000469330 ATAD2Q6PL18 1390 aa11.51□□□□□ -0.57
TSPAN1-203ENST00000469330 ANKRD30BQ9BXX2 1392 aa11.51□□□□□ -0.57
TSPAN1-203ENST00000469330 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
TSPAN1-203ENST00000469330 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
TSPAN1-203ENST00000469330 PTCH1Q13635 1447 aa11.5□□□□□ -0.57
TSPAN1-203ENST00000469330 SIRT1Q96EB6 747 aa11.49□□□□□ -0.57
TSPAN1-203ENST00000469330 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
TSPAN1-203ENST00000469330 LAMC1P11047 1609 aa11.49□□□□□ -0.57
TSPAN1-203ENST00000469330 FNBP4Q8N3X1 1017 aaPredicted RBP11.48□□□□□ -0.57
TSPAN1-203ENST00000469330 RNF216Q9NWF9 866 aaPredicted RBP11.48□□□□□ -0.57
TSPAN1-203ENST00000469330 USP21Q9UK80 565 aa11.48□□□□□ -0.57
TSPAN1-203ENST00000469330 ATRNO75882 1429 aa11.48□□□□□ -0.57
TSPAN1-203ENST00000469330 PRAG1Q86YV5 1406 aa11.48□□□□□ -0.57
TSPAN1-203ENST00000469330 C1orf167Q5SNV9 1468 aa11.48□□□□□ -0.57
TSPAN1-203ENST00000469330 LRPPRCP42704 1394 aaKnown RBP11.47□□□□□ -0.57
TSPAN1-203ENST00000469330 SOS2Q07890 1332 aaPredicted RBP11.47□□□□□ -0.57
TSPAN1-203ENST00000469330 ROBO2Q9HCK4 1378 aa11.46□□□□□ -0.57
TSPAN1-203ENST00000469330 NPHP3Q7Z494 1330 aa11.46□□□□□ -0.57
TSPAN1-203ENST00000469330 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
TSPAN1-203ENST00000469330 STAC3Q96MF2 364 aa11.46□□□□□ -0.57
TSPAN1-203ENST00000469330 ORAI2Q96SN7 254 aa11.46□□□□□ -0.57
TSPAN1-203ENST00000469330 TRPC5Q9UL62 973 aaPredicted RBP11.46□□□□□ -0.57
TSPAN1-203ENST00000469330 BCL9LQ86UU0 1499 aa11.45□□□□□ -0.58
TSPAN1-203ENST00000469330 ABCC11Q96J66 1382 aa11.45□□□□□ -0.58
TSPAN1-203ENST00000469330 ADGRF5Q8IZF2 1346 aa11.45□□□□□ -0.58
TSPAN1-203ENST00000469330 STK26Q9P289 416 aa11.44□□□□□ -0.58
TSPAN1-203ENST00000469330 COL22A1Q8NFW1 1626 aaPredicted RBP11.44□□□□□ -0.58
TSPAN1-203ENST00000469330 PPLO60437 1756 aa11.44□□□□□ -0.58
TSPAN1-203ENST00000469330 HRCP23327 699 aa11.43□□□□□ -0.58
TSPAN1-203ENST00000469330 C14orf93Q9H972 538 aaKnown RBP11.43□□□□□ -0.58
TSPAN1-203ENST00000469330 SPATA31E1Q6ZUB1 1445 aa11.43□□□□□ -0.58
TSPAN1-203ENST00000469330 DHX57Q6P158 1386 aaKnown RBP11.42□□□□□ -0.58
TSPAN1-203ENST00000469330 WAPLQ7Z5K2 1190 aa11.42□□□□□ -0.58
TSPAN1-203ENST00000469330 MYOM2P54296 1465 aa11.42□□□□□ -0.58
TSPAN1-203ENST00000469330 MARF1Q9Y4F3 1742 aaKnown RBP11.41□□□□□ -0.58
TSPAN1-203ENST00000469330 FOXO3O43524 673 aa11.41□□□□□ -0.58
TSPAN1-203ENST00000469330 PSME1Q06323 249 aa11.41□□□□□ -0.58
TSPAN1-203ENST00000469330 TMEM132EQ6IEE7 984 aa11.41□□□□□ -0.58
TSPAN1-203ENST00000469330 DEFB132Q7Z7B7 95 aa11.41□□□□□ -0.58
TSPAN1-203ENST00000469330 CCDC125Q86Z20 511 aa11.41□□□□□ -0.58
TSPAN1-203ENST00000469330 BRWD3Q6RI45 1802 aa11.41□□□□□ -0.58
TSPAN1-203ENST00000469330 TECPR2O15040 1411 aa11.41□□□□□ -0.58
TSPAN1-203ENST00000469330 GLI3P10071 1580 aa11.4□□□□□ -0.58
TSPAN1-203ENST00000469330 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
TSPAN1-203ENST00000469330 PIK3C2GO75747 1445 aa11.38□□□□□ -0.59
TSPAN1-203ENST00000469330 YTHDC2Q9H6S0 1430 aaKnown RBP11.38□□□□□ -0.59
TSPAN1-203ENST00000469330 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
TSPAN1-203ENST00000469330 LRP5O75197 1615 aa11.38□□□□□ -0.59
TSPAN1-203ENST00000469330 PXDNQ92626 1479 aa11.38□□□□□ -0.59
TSPAN1-203ENST00000469330 BLMP54132 1417 aaPredicted RBP11.37□□□□□ -0.59
TSPAN1-203ENST00000469330 CFAP70Q5T0N1 1121 aa11.37□□□□□ -0.59
TSPAN1-203ENST00000469330 KRT28Q7Z3Y7 464 aa11.37□□□□□ -0.59
TSPAN1-203ENST00000469330 POGKQ9P215 609 aa11.37□□□□□ -0.59
TSPAN1-203ENST00000469330 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.36□□□□□ -0.59
TSPAN1-203ENST00000469330 NUTM2FA1L443 756 aa11.36□□□□□ -0.59
TSPAN1-203ENST00000469330 ZBTB22O15209 634 aa11.36□□□□□ -0.59
TSPAN1-203ENST00000469330 XPCQ01831 940 aaPredicted RBP11.36□□□□□ -0.59
TSPAN1-203ENST00000469330 RALGAPBQ86X10 1494 aa11.36□□□□□ -0.59
TSPAN1-203ENST00000469330 CDC42BPGQ6DT37 1551 aa11.36□□□□□ -0.59
TSPAN1-203ENST00000469330 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
TSPAN1-203ENST00000469330 RAB3GAP2Q9H2M9 1393 aa11.35□□□□□ -0.59
TSPAN1-203ENST00000469330 SLIT2O94813 1529 aa11.35□□□□□ -0.59
TSPAN1-203ENST00000469330 SPATA31A3Q5VYP0 1347 aa11.35□□□□□ -0.59
TSPAN1-203ENST00000469330 HAP1P54257 671 aaPredicted RBP11.34□□□□□ -0.59
TSPAN1-203ENST00000469330 PRAM1Q96QH2 718 aa11.34□□□□□ -0.59
TSPAN1-203ENST00000469330 IFT172Q9UG01 1749 aa11.33□□□□□ -0.6
TSPAN1-203ENST00000469330 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
TSPAN1-203ENST00000469330 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
TSPAN1-203ENST00000469330 NRXN1Q9ULB1 1477 aa11.32□□□□□ -0.6
TSPAN1-203ENST00000469330 KNDC1Q76NI1 1749 aa11.32□□□□□ -0.6
TSPAN1-203ENST00000469330 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
TSPAN1-203ENST00000469330 UNC5CLQ8IV45 518 aa11.32□□□□□ -0.6
TSPAN1-203ENST00000469330 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
TSPAN1-203ENST00000469330 EIF3AQ14152 1382 aaKnown RBP11.31□□□□□ -0.6
TSPAN1-203ENST00000469330 TRAK1Q9UPV9 953 aa11.31□□□□□ -0.6
TSPAN1-203ENST00000469330 SBNO1A3KN83 1393 aa11.3□□□□□ -0.6
TSPAN1-203ENST00000469330 C1QBPQ07021 282 aaKnown RBP11.3□□□□□ -0.6
TSPAN1-203ENST00000469330 SAFB2Q14151 953 aaKnown RBP eCLIP11.3□□□□□ -0.6
TSPAN1-203ENST00000469330 SEPT12Q8IYM1 358 aa11.3□□□□□ -0.6
TSPAN1-203ENST00000469330 ARHGEF10O15013 1369 aa11.29□□□□□ -0.6
TSPAN1-203ENST00000469330 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
TSPAN1-203ENST00000469330 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
TSPAN1-203ENST00000469330 KIF1AQ12756 1690 aa11.29□□□□□ -0.6
TSPAN1-203ENST00000469330 DLC1Q96QB1 1528 aa11.29□□□□□ -0.6
TSPAN1-203ENST00000469330 GPRASP1Q5JY77 1395 aa11.28□□□□□ -0.6
TSPAN1-203ENST00000469330 USP32Q8NFA0 1604 aa11.28□□□□□ -0.6
TSPAN1-203ENST00000469330 ANKARQ7Z5J8 1434 aa11.28□□□□□ -0.6
TSPAN1-203ENST00000469330 WASLO00401 505 aaPredicted RBP11.28□□□□□ -0.6
TSPAN1-203ENST00000469330 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
TSPAN1-203ENST00000469330 PMFBP1Q8TBY8 1022 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms