RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 NEXMIFQ5QGS0 1516 aa18.66■□□□□ 0.58
SMARCD3-205ENST00000469154 VGFO15240 615 aaPredicted RBP18.66■□□□□ 0.58
SMARCD3-205ENST00000469154 CRBNQ96SW2 442 aa18.66■□□□□ 0.58
SMARCD3-205ENST00000469154 NLRP1Q9C000 1473 aa18.66■□□□□ 0.58
SMARCD3-205ENST00000469154 DEKP35659 375 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-205ENST00000469154 BACH2Q9BYV9 841 aa18.65■□□□□ 0.58
SMARCD3-205ENST00000469154 PPLO60437 1756 aa18.65■□□□□ 0.58
SMARCD3-205ENST00000469154 PLIN1O60240 522 aa18.64■□□□□ 0.58
SMARCD3-205ENST00000469154 NBR1Q14596 966 aa18.64■□□□□ 0.57
SMARCD3-205ENST00000469154 PTPRMP28827 1452 aa18.64■□□□□ 0.57
SMARCD3-205ENST00000469154 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
SMARCD3-205ENST00000469154 PLEKHH1Q9ULM0 1364 aa18.63■□□□□ 0.57
SMARCD3-205ENST00000469154 NRXN1Q9ULB1 1477 aa18.62■□□□□ 0.57
SMARCD3-205ENST00000469154 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
SMARCD3-205ENST00000469154 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
SMARCD3-205ENST00000469154 RIMS2Q9UQ26 1411 aa18.61■□□□□ 0.57
SMARCD3-205ENST00000469154 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
SMARCD3-205ENST00000469154 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
SMARCD3-205ENST00000469154 UBR1Q8IWV7 1749 aa18.6■□□□□ 0.57
SMARCD3-205ENST00000469154 DUSP27Q5VZP5 1158 aa18.6■□□□□ 0.57
SMARCD3-205ENST00000469154 NPM2Q86SE8 214 aaKnown RBP18.59■□□□□ 0.57
SMARCD3-205ENST00000469154 ZFYVE9O95405 1425 aa18.59■□□□□ 0.57
SMARCD3-205ENST00000469154 KDM4FA0A1W2PPD8 638 aa18.59■□□□□ 0.57
SMARCD3-205ENST00000469154 GOLGA2Q08379 1002 aa18.59■□□□□ 0.57
SMARCD3-205ENST00000469154 TMEM2Q9UHN6 1383 aa18.58■□□□□ 0.57
SMARCD3-205ENST00000469154 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.58■□□□□ 0.57
SMARCD3-205ENST00000469154 C14orf93Q9H972 538 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-205ENST00000469154 THEMISQ8N1K5 641 aaPredicted RBP18.57■□□□□ 0.56
SMARCD3-205ENST00000469154 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.57■□□□□ 0.56
SMARCD3-205ENST00000469154 KDM2BQ8NHM5 1336 aa18.56■□□□□ 0.56
SMARCD3-205ENST00000469154 HDGFP51858 240 aaKnown RBP18.55■□□□□ 0.56
SMARCD3-205ENST00000469154 SETD1BQ9UPS6 1966 aaKnown RBP18.55■□□□□ 0.56
SMARCD3-205ENST00000469154 TMEM132EQ6IEE7 984 aa18.55■□□□□ 0.56
SMARCD3-205ENST00000469154 CENPQQ7L2Z9 268 aaPredicted RBP18.55■□□□□ 0.56
SMARCD3-205ENST00000469154 CEP170BQ9Y4F5 1589 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-205ENST00000469154 C20orf194Q5TEA3 1177 aa18.54■□□□□ 0.56
SMARCD3-205ENST00000469154 LTKP29376 864 aa18.54■□□□□ 0.56
SMARCD3-205ENST00000469154 SLFN5Q08AF3 891 aa18.54■□□□□ 0.56
SMARCD3-205ENST00000469154 TXNDC2Q86VQ3 553 aa18.53■□□□□ 0.56
SMARCD3-205ENST00000469154 DDRGK1Q96HY6 314 aa18.52■□□□□ 0.56
SMARCD3-205ENST00000469154 SETBP1Q9Y6X0 1596 aa18.52■□□□□ 0.56
SMARCD3-205ENST00000469154 EID1Q9Y6B2 187 aa18.52■□□□□ 0.55
SMARCD3-205ENST00000469154 TRMT2AQ8IZ69 625 aaKnown RBP18.51■□□□□ 0.55
SMARCD3-205ENST00000469154 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
SMARCD3-205ENST00000469154 SBNO2Q9Y2G9 1366 aa18.51■□□□□ 0.55
SMARCD3-205ENST00000469154 NKTRP30414 1462 aaKnown RBP18.51■□□□□ 0.55
SMARCD3-205ENST00000469154 SLIT1O75093 1534 aa18.49■□□□□ 0.55
SMARCD3-205ENST00000469154 ARHGAP23Q9P227 1491 aa18.48■□□□□ 0.55
SMARCD3-205ENST00000469154 ADGRB1O14514 1584 aa18.48■□□□□ 0.55
SMARCD3-205ENST00000469154 TRAK1Q9UPV9 953 aa18.48■□□□□ 0.55
SMARCD3-205ENST00000469154 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
SMARCD3-205ENST00000469154 PPM1GO15355 546 aaPredicted RBP18.47■□□□□ 0.55
SMARCD3-205ENST00000469154 CCDC146Q8IYE0 955 aa18.47■□□□□ 0.55
SMARCD3-205ENST00000469154 USP35Q9P2H5 1018 aa18.47■□□□□ 0.55
SMARCD3-205ENST00000469154 ZNF142P52746 1687 aaPredicted RBP18.46■□□□□ 0.55
SMARCD3-205ENST00000469154 E9PSI1 815 aa18.46■□□□□ 0.55
SMARCD3-205ENST00000469154 STK26Q9P289 416 aa18.46■□□□□ 0.55
SMARCD3-205ENST00000469154 QRICH2Q9H0J4 1663 aa18.46■□□□□ 0.55
SMARCD3-205ENST00000469154 POLR3AO14802 1390 aaPredicted RBP18.45■□□□□ 0.54
SMARCD3-205ENST00000469154 VIRMAQ69YN4 1812 aaKnown RBP18.45■□□□□ 0.54
SMARCD3-205ENST00000469154 APAF1O14727 1248 aa18.44■□□□□ 0.54
SMARCD3-205ENST00000469154 PLEKHG1Q9ULL1 1385 aa18.44■□□□□ 0.54
SMARCD3-205ENST00000469154 SHPRHQ149N8 1683 aa18.44■□□□□ 0.54
SMARCD3-205ENST00000469154 USP32Q8NFA0 1604 aa18.44■□□□□ 0.54
SMARCD3-205ENST00000469154 SKAP1Q86WV1 359 aa18.44■□□□□ 0.54
SMARCD3-205ENST00000469154 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
SMARCD3-205ENST00000469154 SLC26A8Q96RN1 970 aa18.43■□□□□ 0.54
SMARCD3-205ENST00000469154 NINLQ9Y2I6 1382 aa18.43■□□□□ 0.54
SMARCD3-205ENST00000469154 NRXN3Q9Y4C0 1643 aa18.43■□□□□ 0.54
SMARCD3-205ENST00000469154 FAM161AQ3B820 660 aa18.42■□□□□ 0.54
SMARCD3-205ENST00000469154 CARD14Q9BXL6 1004 aa18.42■□□□□ 0.54
SMARCD3-205ENST00000469154 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-205ENST00000469154 CENPJQ9HC77 1338 aaPredicted RBP18.41■□□□□ 0.54
SMARCD3-205ENST00000469154 METP08581 1390 aa18.41■□□□□ 0.54
SMARCD3-205ENST00000469154 PRKCSHP14314 528 aaPredicted RBP18.41■□□□□ 0.54
SMARCD3-205ENST00000469154 ADAMTS13Q76LX8 1427 aa18.4■□□□□ 0.54
SMARCD3-205ENST00000469154 YTHDC2Q9H6S0 1430 aaKnown RBP18.4■□□□□ 0.54
SMARCD3-205ENST00000469154 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
SMARCD3-205ENST00000469154 NEFMP07197 916 aa18.39■□□□□ 0.53
SMARCD3-205ENST00000469154 NSD3Q9BZ95 1437 aa18.38■□□□□ 0.53
SMARCD3-205ENST00000469154 SETD1AO15047 1707 aaKnown RBP18.38■□□□□ 0.53
SMARCD3-205ENST00000469154 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMARCD3-205ENST00000469154 C8orf34Q49A92 452 aa18.37■□□□□ 0.53
SMARCD3-205ENST00000469154 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
SMARCD3-205ENST00000469154 HSPA2P54652 639 aa18.37■□□□□ 0.53
SMARCD3-205ENST00000469154 NCKAP5LQ9HCH0 1330 aa18.36■□□□□ 0.53
SMARCD3-205ENST00000469154 BCAR3O75815 825 aa18.35■□□□□ 0.53
SMARCD3-205ENST00000469154 PDE3AQ14432 1141 aa18.35■□□□□ 0.53
SMARCD3-205ENST00000469154 IQSEC2Q5JU85 1478 aa18.35■□□□□ 0.53
SMARCD3-205ENST00000469154 TBX22Q9Y458 520 aa18.35■□□□□ 0.53
SMARCD3-205ENST00000469154 MED14O60244 1454 aa18.35■□□□□ 0.53
SMARCD3-205ENST00000469154 PRAM1Q96QH2 718 aa18.34■□□□□ 0.53
SMARCD3-205ENST00000469154 MORC1Q86VD1 984 aa18.33■□□□□ 0.53
SMARCD3-205ENST00000469154 POGKQ9P215 609 aa18.33■□□□□ 0.53
SMARCD3-205ENST00000469154 DAXXQ9UER7 740 aaPredicted RBP18.33■□□□□ 0.52
SMARCD3-205ENST00000469154 ABCC11Q96J66 1382 aa18.33■□□□□ 0.52
SMARCD3-205ENST00000469154 WWC1Q8IX03 1113 aa18.32■□□□□ 0.52
SMARCD3-205ENST00000469154 ARHGEF28Q8N1W1 1705 aaKnown RBP18.32■□□□□ 0.52
SMARCD3-205ENST00000469154 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
SMARCD3-205ENST00000469154 WAPLQ7Z5K2 1190 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms