RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 KCNA6P17658 529 aa17.76■□□□□ 0.43
RUNX1-213ENST00000469087 CHD2O14647 1828 aaKnown RBP17.76■□□□□ 0.43
RUNX1-213ENST00000469087 STRCQ7RTU9 1775 aa17.75■□□□□ 0.43
RUNX1-213ENST00000469087 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
RUNX1-213ENST00000469087 MIER1Q8N108 512 aa17.74■□□□□ 0.43
RUNX1-213ENST00000469087 XRN1Q8IZH2 1706 aaKnown RBP17.74■□□□□ 0.43
RUNX1-213ENST00000469087 CABP2Q9NPB3 220 aa17.74■□□□□ 0.43
RUNX1-213ENST00000469087 PUS7Q96PZ0 661 aaKnown RBP17.73■□□□□ 0.43
RUNX1-213ENST00000469087 CDK19Q9BWU1 502 aa17.73■□□□□ 0.43
RUNX1-213ENST00000469087 PTCH1Q13635 1447 aa17.72■□□□□ 0.43
RUNX1-213ENST00000469087 SRPK2P78362 688 aaKnown RBP17.71■□□□□ 0.43
RUNX1-213ENST00000469087 PANK3Q9H999 370 aa17.71■□□□□ 0.43
RUNX1-213ENST00000469087 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.71■□□□□ 0.43
RUNX1-213ENST00000469087 WASLO00401 505 aaPredicted RBP17.69■□□□□ 0.42
RUNX1-213ENST00000469087 PER1O15534 1290 aaPredicted RBP17.68■□□□□ 0.42
RUNX1-213ENST00000469087 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
RUNX1-213ENST00000469087 RBM33Q96EV2 1170 aaKnown RBP17.68■□□□□ 0.42
RUNX1-213ENST00000469087 MYOM1P52179 1685 aa17.68■□□□□ 0.42
RUNX1-213ENST00000469087 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
RUNX1-213ENST00000469087 TMC1Q8TDI8 760 aa17.67■□□□□ 0.42
RUNX1-213ENST00000469087 NWD1Q149M9 1564 aa17.64■□□□□ 0.41
RUNX1-213ENST00000469087 ANP32CO43423 234 aa17.64■□□□□ 0.41
RUNX1-213ENST00000469087 ATAD2Q6PL18 1390 aa17.63■□□□□ 0.41
RUNX1-213ENST00000469087 PROSER2Q86WR7 435 aaPredicted RBP17.63■□□□□ 0.41
RUNX1-213ENST00000469087 STRCP1A6NGW2 1772 aa17.63■□□□□ 0.41
RUNX1-213ENST00000469087 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
RUNX1-213ENST00000469087 NUDT16Q96DE0 195 aaKnown RBP17.61■□□□□ 0.41
RUNX1-213ENST00000469087 CARD14Q9BXL6 1004 aa17.61■□□□□ 0.41
RUNX1-213ENST00000469087 CABP1Q9NZU7 370 aa17.61■□□□□ 0.41
RUNX1-213ENST00000469087 NUTM2FA1L443 756 aa17.61■□□□□ 0.41
RUNX1-213ENST00000469087 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
RUNX1-213ENST00000469087 PRR36Q9H6K5 1346 aa17.61■□□□□ 0.41
RUNX1-213ENST00000469087 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
RUNX1-213ENST00000469087 PRKRIP1Q9H875 184 aaPredicted RBP17.59■□□□□ 0.41
RUNX1-213ENST00000469087 CCDC61Q9Y6R9 512 aa17.59■□□□□ 0.41
RUNX1-213ENST00000469087 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.41
RUNX1-213ENST00000469087 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.4
RUNX1-213ENST00000469087 NINLQ9Y2I6 1382 aa17.58■□□□□ 0.4
RUNX1-213ENST00000469087 NALCNQ8IZF0 1738 aa17.57■□□□□ 0.4
RUNX1-213ENST00000469087 ZNF335Q9H4Z2 1342 aaPredicted RBP17.57■□□□□ 0.4
RUNX1-213ENST00000469087 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
RUNX1-213ENST00000469087 ATP7BP35670 1465 aa17.56■□□□□ 0.4
RUNX1-213ENST00000469087 CD163L1Q9NR16 1453 aa17.56■□□□□ 0.4
RUNX1-213ENST00000469087 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
RUNX1-213ENST00000469087 C14orf37Q86TY3 774 aa17.56■□□□□ 0.4
RUNX1-213ENST00000469087 PPIP5K1Q6PFW1 1433 aa17.55■□□□□ 0.4
RUNX1-213ENST00000469087 ADGRL3Q9HAR2 1447 aa17.55■□□□□ 0.4
RUNX1-213ENST00000469087 TERF2IPQ9NYB0 399 aa17.55■□□□□ 0.4
RUNX1-213ENST00000469087 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
RUNX1-213ENST00000469087 TMEM94Q12767 1356 aa17.54■□□□□ 0.4
RUNX1-213ENST00000469087 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
RUNX1-213ENST00000469087 C19orf44Q9H6X5 657 aa17.53■□□□□ 0.4
RUNX1-213ENST00000469087 USP32Q8NFA0 1604 aa17.53■□□□□ 0.4
RUNX1-213ENST00000469087 RGPD8O14715 1765 aaPredicted RBP17.53■□□□□ 0.4
RUNX1-213ENST00000469087 NSD3Q9BZ95 1437 aa17.52■□□□□ 0.4
RUNX1-213ENST00000469087 PLEKHG3A1L390 1219 aa17.52■□□□□ 0.4
RUNX1-213ENST00000469087 HDGFL2Q7Z4V5 671 aaPredicted RBP17.52■□□□□ 0.4
RUNX1-213ENST00000469087 FMN2Q9NZ56 1722 aa17.52■□□□□ 0.39
RUNX1-213ENST00000469087 CDC42BPGQ6DT37 1551 aa17.51■□□□□ 0.39
RUNX1-213ENST00000469087 CPSF1Q10570 1443 aaKnown RBP17.51■□□□□ 0.39
RUNX1-213ENST00000469087 NCOA3Q9Y6Q9 1424 aa17.51■□□□□ 0.39
RUNX1-213ENST00000469087 KTN1Q86UP2 1357 aaKnown RBP17.5■□□□□ 0.39
RUNX1-213ENST00000469087 RALBP1Q15311 655 aa17.5■□□□□ 0.39
RUNX1-213ENST00000469087 TOPAZ1Q8N9V7 1692 aa17.5■□□□□ 0.39
RUNX1-213ENST00000469087 ANKARQ7Z5J8 1434 aa17.49■□□□□ 0.39
RUNX1-213ENST00000469087 NPC1L1Q9UHC9 1359 aa17.49■□□□□ 0.39
RUNX1-213ENST00000469087 CCER2I3L3R5 266 aa17.49■□□□□ 0.39
RUNX1-213ENST00000469087 PMFBP1Q8TBY8 1022 aa17.49■□□□□ 0.39
RUNX1-213ENST00000469087 LRRC7Q96NW7 1537 aa17.49■□□□□ 0.39
RUNX1-213ENST00000469087 ACEP12821 1306 aa17.49■□□□□ 0.39
RUNX1-213ENST00000469087 PARD3Q8TEW0 1356 aa17.48■□□□□ 0.39
RUNX1-213ENST00000469087 XIRP1Q702N8 1843 aaKnown RBP17.48■□□□□ 0.39
RUNX1-213ENST00000469087 ZNF692Q9BU19 519 aaPredicted RBP17.48■□□□□ 0.39
RUNX1-213ENST00000469087 CCDC184Q52MB2 194 aa17.47■□□□□ 0.39
RUNX1-213ENST00000469087 CGNL1Q0VF96 1302 aa17.47■□□□□ 0.39
RUNX1-213ENST00000469087 ITSN1Q15811 1721 aa17.46■□□□□ 0.39
RUNX1-213ENST00000469087 FYB1O15117 783 aa17.45■□□□□ 0.38
RUNX1-213ENST00000469087 ATF3P18847 181 aa17.45■□□□□ 0.38
RUNX1-213ENST00000469087 AKAP12Q02952 1782 aa17.44■□□□□ 0.38
RUNX1-213ENST00000469087 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
RUNX1-213ENST00000469087 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.44■□□□□ 0.38
RUNX1-213ENST00000469087 POLR3AO14802 1390 aaPredicted RBP17.44■□□□□ 0.38
RUNX1-213ENST00000469087 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
RUNX1-213ENST00000469087 ORAI2Q96SN7 254 aa17.43■□□□□ 0.38
RUNX1-213ENST00000469087 PHF8Q9UPP1 1060 aa17.43■□□□□ 0.38
RUNX1-213ENST00000469087 MYBBP1AQ9BQG0 1328 aaKnown RBP17.43■□□□□ 0.38
RUNX1-213ENST00000469087 MSH6P52701 1360 aa17.43■□□□□ 0.38
RUNX1-213ENST00000469087 CADPS2Q86UW7 1296 aa17.43■□□□□ 0.38
RUNX1-213ENST00000469087 DCCP43146 1447 aa17.42■□□□□ 0.38
RUNX1-213ENST00000469087 EDC4Q6P2E9 1401 aaKnown RBP17.42■□□□□ 0.38
RUNX1-213ENST00000469087 MON2Q7Z3U7 1717 aa17.42■□□□□ 0.38
RUNX1-213ENST00000469087 GGNBP2Q9H3C7 697 aa17.42■□□□□ 0.38
RUNX1-213ENST00000469087 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
RUNX1-213ENST00000469087 MORC1Q86VD1 984 aa17.4■□□□□ 0.38
RUNX1-213ENST00000469087 USP6P35125 1406 aa17.4■□□□□ 0.38
RUNX1-213ENST00000469087 MST1RQ04912 1400 aa17.4■□□□□ 0.38
RUNX1-213ENST00000469087 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
RUNX1-213ENST00000469087 NSD2O96028 1365 aa17.39■□□□□ 0.37
RUNX1-213ENST00000469087 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.37
RUNX1-213ENST00000469087 MRS2Q9HD23 443 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms