RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 SOWAHDA6NJG2 315 aa7.49□□□□□ -1.21
SMG5-202ENST00000468993 PRSS12P56730 875 aa7.49□□□□□ -1.21
SMG5-202ENST00000468993 NOM1Q5C9Z4 860 aaKnown RBP7.49□□□□□ -1.21
SMG5-202ENST00000468993 KANK4Q5T7N3 995 aaPredicted RBP7.49□□□□□ -1.21
SMG5-202ENST00000468993 HELBQ8NG08 1087 aaPredicted RBP7.49□□□□□ -1.21
SMG5-202ENST00000468993 GIPC2Q8TF65 315 aa7.49□□□□□ -1.21
SMG5-202ENST00000468993 STK32AQ8WU08 396 aa7.49□□□□□ -1.21
SMG5-202ENST00000468993 DDX11L8A8MPP1 907 aa7.48□□□□□ -1.21
SMG5-202ENST00000468993 NACADO15069 1562 aa7.48□□□□□ -1.21
SMG5-202ENST00000468993 CTDSPL2Q05D32 466 aa7.48□□□□□ -1.21
SMG5-202ENST00000468993 PIP4P2Q8N4L2 257 aa7.48□□□□□ -1.21
SMG5-202ENST00000468993 UNC13AQ9UPW8 1703 aa7.48□□□□□ -1.21
SMG5-202ENST00000468993 PPM1GO15355 546 aaPredicted RBP7.47□□□□□ -1.21
SMG5-202ENST00000468993 SSFA2P28290 1259 aa7.47□□□□□ -1.21
SMG5-202ENST00000468993 MARSP56192 900 aaKnown RBP7.47□□□□□ -1.21
SMG5-202ENST00000468993 ZC3H6P61129 1189 aaKnown RBP7.47□□□□□ -1.21
SMG5-202ENST00000468993 USP46P62068 366 aa7.47□□□□□ -1.21
SMG5-202ENST00000468993 ZNF326Q5BKZ1 582 aaKnown RBP7.47□□□□□ -1.21
SMG5-202ENST00000468993 PNMA1Q8ND90 353 aa7.47□□□□□ -1.21
SMG5-202ENST00000468993 SPATA32Q96LK8 384 aa7.47□□□□□ -1.21
SMG5-202ENST00000468993 NOVA2Q9UNW9 492 aaKnown RBP7.47□□□□□ -1.21
SMG5-202ENST00000468993 KDM4AO75164 1064 aa7.46□□□□□ -1.22
SMG5-202ENST00000468993 EIF4G2P78344 907 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMG5-202ENST00000468993 CDCA7LQ96GN5 454 aa7.46□□□□□ -1.22
SMG5-202ENST00000468993 FDX1P10109 184 aa7.45□□□□□ -1.22
SMG5-202ENST00000468993 PLCG2P16885 1265 aa7.45□□□□□ -1.22
SMG5-202ENST00000468993 DNAJB2P25686 324 aa7.45□□□□□ -1.22
SMG5-202ENST00000468993 FOSBP53539 338 aa7.45□□□□□ -1.22
SMG5-202ENST00000468993 NPAS4Q8IUM7 802 aa7.45□□□□□ -1.22
SMG5-202ENST00000468993 NFATC2IPQ8NCF5 419 aa7.45□□□□□ -1.22
SMG5-202ENST00000468993 UBXN4Q92575 508 aa7.45□□□□□ -1.22
SMG5-202ENST00000468993 EYA1Q99502 592 aa7.45□□□□□ -1.22
SMG5-202ENST00000468993 EIF4G1Q04637 1599 aaKnown RBP7.45□□□□□ -1.22
SMG5-202ENST00000468993 HOXA2O43364 376 aa7.44□□□□□ -1.22
SMG5-202ENST00000468993 POTEDQ86YR6 584 aa7.44□□□□□ -1.22
SMG5-202ENST00000468993 LRRN4Q8WUT4 740 aa7.44□□□□□ -1.22
SMG5-202ENST00000468993 ANKRD33BA6NCL7 494 aa7.43□□□□□ -1.22
SMG5-202ENST00000468993 FAM196BA6NMK8 535 aa7.43□□□□□ -1.22
SMG5-202ENST00000468993 SMARCA5O60264 1052 aaPredicted RBP7.43□□□□□ -1.22
SMG5-202ENST00000468993 SF3A1Q15459 793 aaKnown RBP7.43□□□□□ -1.22
SMG5-202ENST00000468993 CLP1Q92989 425 aaKnown RBP7.43□□□□□ -1.22
SMG5-202ENST00000468993 ZDHHC16Q969W1 377 aa7.43□□□□□ -1.22
SMG5-202ENST00000468993 MTMR2Q13614 643 aa7.42□□□□□ -1.22
SMG5-202ENST00000468993 SLF2Q8IX21 1173 aa7.42□□□□□ -1.22
SMG5-202ENST00000468993 TMEM134Q9H6X4 195 aa7.42□□□□□ -1.22
SMG5-202ENST00000468993 ERCC6Q03468 1493 aa7.42□□□□□ -1.22
SMG5-202ENST00000468993 USP17L3A6NCW0 530 aa7.41□□□□□ -1.22
SMG5-202ENST00000468993 USP17L4A6NCW7 530 aa7.41□□□□□ -1.22
SMG5-202ENST00000468993 NCLP19338 710 aaKnown RBP7.41□□□□□ -1.22
SMG5-202ENST00000468993 SERPINB4P48594 390 aa7.41□□□□□ -1.22
SMG5-202ENST00000468993 ATN1P54259 1190 aaPredicted RBP7.41□□□□□ -1.22
SMG5-202ENST00000468993 USP17L2Q6R6M4 530 aa7.41□□□□□ -1.22
SMG5-202ENST00000468993 USP17L1Q7RTZ2 530 aa7.41□□□□□ -1.22
SMG5-202ENST00000468993 PLEKHM2Q8IWE5 1019 aa7.41□□□□□ -1.22
SMG5-202ENST00000468993 RDH13Q8NBN7 331 aa7.41□□□□□ -1.22
SMG5-202ENST00000468993 EPS8L1Q8TE68 723 aa7.41□□□□□ -1.22
SMG5-202ENST00000468993 BIN2Q9UBW5 565 aaPredicted RBP7.41□□□□□ -1.22
SMG5-202ENST00000468993 USP17L15C9J2P7 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L13C9JLJ4 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L12C9JPN9 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L11C9JVI0 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L21D6R901 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L18D6R9N7 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L22D6RA61 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L17D6RBQ6 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L19D6RCP7 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L20D6RJB6 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 USP17L24Q0WX57 530 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 TSC1Q92574 1164 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 SLAIN2Q9P270 581 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 PCDHGC3Q9UN70 934 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 PCDHGA4Q9Y5G9 962 aa7.4□□□□□ -1.22
SMG5-202ENST00000468993 KDM4FA0A1W2PPD8 638 aa7.39□□□□□ -1.23
SMG5-202ENST00000468993 RECKO95980 971 aa7.39□□□□□ -1.23
SMG5-202ENST00000468993 NAALADL2Q58DX5 795 aa7.39□□□□□ -1.23
SMG5-202ENST00000468993 BCL11AQ9H165 835 aa7.39□□□□□ -1.23
SMG5-202ENST00000468993 FAM198AQ9UFP1 575 aa7.39□□□□□ -1.23
SMG5-202ENST00000468993 CADPSQ9ULU8 1353 aa7.38□□□□□ -1.23
SMG5-202ENST00000468993 USP17L5A8MUK1 530 aa7.38□□□□□ -1.23
SMG5-202ENST00000468993 CFAP99D6REC4 459 aa7.38□□□□□ -1.23
SMG5-202ENST00000468993 ATP2B4P23634 1241 aa7.38□□□□□ -1.23
SMG5-202ENST00000468993 GCGRP47871 477 aa7.38□□□□□ -1.23
SMG5-202ENST00000468993 FAM69CQ0P6D2 419 aa7.38□□□□□ -1.23
SMG5-202ENST00000468993 NR1H3Q13133 447 aa7.38□□□□□ -1.23
SMG5-202ENST00000468993 CHRDL2Q6WN34 429 aa7.38□□□□□ -1.23
SMG5-202ENST00000468993 C19orf67A6NJJ6 358 aa7.37□□□□□ -1.23
SMG5-202ENST00000468993 NBPF26B4DH59 902 aa7.37□□□□□ -1.23
SMG5-202ENST00000468993 PIK3CDO00329 1044 aa7.37□□□□□ -1.23
SMG5-202ENST00000468993 GALR2O43603 387 aaPredicted RBP7.37□□□□□ -1.23
SMG5-202ENST00000468993 FBXO33Q7Z6M2 555 aa7.37□□□□□ -1.23
SMG5-202ENST00000468993 ZNF454Q8N9F8 522 aa7.37□□□□□ -1.23
SMG5-202ENST00000468993 C1orf216Q8TAB5 229 aa7.37□□□□□ -1.23
SMG5-202ENST00000468993 FAM200AQ8TCP9 573 aa7.37□□□□□ -1.23
SMG5-202ENST00000468993 ADAM33Q9BZ11 813 aa7.37□□□□□ -1.23
SMG5-202ENST00000468993 SKIP12755 728 aa7.36□□□□□ -1.23
SMG5-202ENST00000468993 NR6A1Q15406 480 aa7.36□□□□□ -1.23
SMG5-202ENST00000468993 CRTC2Q53ET0 693 aaPredicted RBP7.36□□□□□ -1.23
SMG5-202ENST00000468993 LARP1Q6PKG0 1096 aaKnown RBP7.36□□□□□ -1.23
SMG5-202ENST00000468993 NUDT18Q6ZVK8 323 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms