RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 TRMT2AQ8IZ69 625 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-211ENST00000468468 C14orf93Q9H972 538 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-211ENST00000468468 ARHGAP31Q2M1Z3 1444 aa20.58■□□□□ 0.89
TSPAN4-211ENST00000468468 CARD14Q9BXL6 1004 aa20.57■□□□□ 0.88
TSPAN4-211ENST00000468468 SPINK5Q9NQ38 1064 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-211ENST00000468468 PIK3C2BO00750 1634 aa20.57■□□□□ 0.88
TSPAN4-211ENST00000468468 RPGRIP1LQ68CZ1 1315 aa20.57■□□□□ 0.88
TSPAN4-211ENST00000468468 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-211ENST00000468468 ZC3H13Q5T200 1668 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-211ENST00000468468 DDRGK1Q96HY6 314 aa20.56■□□□□ 0.88
TSPAN4-211ENST00000468468 SETBP1Q9Y6X0 1596 aa20.54■□□□□ 0.88
TSPAN4-211ENST00000468468 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-211ENST00000468468 CENPJQ9HC77 1338 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-211ENST00000468468 FBXO31Q5XUX0 539 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-211ENST00000468468 ADGRB1O14514 1584 aa20.53■□□□□ 0.88
TSPAN4-211ENST00000468468 E9PSI1 815 aa20.53■□□□□ 0.88
TSPAN4-211ENST00000468468 NEFMP07197 916 aa20.53■□□□□ 0.88
TSPAN4-211ENST00000468468 NEXMIFQ5QGS0 1516 aa20.52■□□□□ 0.88
TSPAN4-211ENST00000468468 BCAR3O75815 825 aa20.51■□□□□ 0.87
TSPAN4-211ENST00000468468 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
TSPAN4-211ENST00000468468 PPM1GO15355 546 aaPredicted RBP20.51■□□□□ 0.87
TSPAN4-211ENST00000468468 SLC52A1Q9NWF4 448 aa20.51■□□□□ 0.87
TSPAN4-211ENST00000468468 MYO3AQ8NEV4 1616 aa20.51■□□□□ 0.87
TSPAN4-211ENST00000468468 FAM161AQ3B820 660 aa20.5■□□□□ 0.87
TSPAN4-211ENST00000468468 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
TSPAN4-211ENST00000468468 PREX1Q8TCU6 1659 aa20.49■□□□□ 0.87
TSPAN4-211ENST00000468468 SBNO2Q9Y2G9 1366 aa20.49■□□□□ 0.87
TSPAN4-211ENST00000468468 NGEFQ8N5V2 710 aa20.49■□□□□ 0.87
TSPAN4-211ENST00000468468 USP35Q9P2H5 1018 aa20.49■□□□□ 0.87
TSPAN4-211ENST00000468468 MLECQ14165 292 aa20.48■□□□□ 0.87
TSPAN4-211ENST00000468468 UBE2Q2Q8WVN8 375 aa20.48■□□□□ 0.87
TSPAN4-211ENST00000468468 RGS3P49796 1198 aa20.47■□□□□ 0.87
TSPAN4-211ENST00000468468 C8orf34Q49A92 452 aa20.47■□□□□ 0.87
TSPAN4-211ENST00000468468 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-211ENST00000468468 MYO5BQ9ULV0 1848 aa20.45■□□□□ 0.86
TSPAN4-211ENST00000468468 QRICH2Q9H0J4 1663 aa20.45■□□□□ 0.86
TSPAN4-211ENST00000468468 MORC1Q86VD1 984 aa20.44■□□□□ 0.86
TSPAN4-211ENST00000468468 TMEM131LA2VDJ0 1609 aa20.43■□□□□ 0.86
TSPAN4-211ENST00000468468 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
TSPAN4-211ENST00000468468 NSD3Q9BZ95 1437 aa20.43■□□□□ 0.86
TSPAN4-211ENST00000468468 KIF13AQ9H1H9 1805 aa20.42■□□□□ 0.86
TSPAN4-211ENST00000468468 TNNT2P45379 298 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-211ENST00000468468 SLC4A3P48751 1232 aa20.42■□□□□ 0.86
TSPAN4-211ENST00000468468 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-211ENST00000468468 SLC12A5Q9H2X9 1139 aa20.42■□□□□ 0.86
TSPAN4-211ENST00000468468 SAFB2Q14151 953 aaKnown RBP eCLIP20.41■□□□□ 0.86
TSPAN4-211ENST00000468468 AGLP35573 1532 aa20.41■□□□□ 0.86
TSPAN4-211ENST00000468468 REREQ9P2R6 1566 aa20.41■□□□□ 0.86
TSPAN4-211ENST00000468468 STK26Q9P289 416 aa20.41■□□□□ 0.86
TSPAN4-211ENST00000468468 PDE3AQ14432 1141 aa20.4■□□□□ 0.86
TSPAN4-211ENST00000468468 IGHDP01880 384 aa20.4■□□□□ 0.86
TSPAN4-211ENST00000468468 CANXP27824 592 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-211ENST00000468468 NEUROD2Q15784 382 aa20.4■□□□□ 0.86
TSPAN4-211ENST00000468468 CGNL1Q0VF96 1302 aa20.4■□□□□ 0.86
TSPAN4-211ENST00000468468 CLTCQ00610 1675 aaKnown RBP20.39■□□□□ 0.86
TSPAN4-211ENST00000468468 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.85
TSPAN4-211ENST00000468468 ZFYVE9O95405 1425 aa20.39■□□□□ 0.85
TSPAN4-211ENST00000468468 RUNDC1Q96C34 613 aa20.38■□□□□ 0.85
TSPAN4-211ENST00000468468 ARHGEF28Q8N1W1 1705 aaKnown RBP20.37■□□□□ 0.85
TSPAN4-211ENST00000468468 RRP7AQ9Y3A4 280 aaKnown RBP20.37■□□□□ 0.85
TSPAN4-211ENST00000468468 PANK1Q8TE04 598 aa20.37■□□□□ 0.85
TSPAN4-211ENST00000468468 COG6Q9Y2V7 657 aa20.36■□□□□ 0.85
TSPAN4-211ENST00000468468 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
TSPAN4-211ENST00000468468 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
TSPAN4-211ENST00000468468 SHPRHQ149N8 1683 aa20.35■□□□□ 0.85
TSPAN4-211ENST00000468468 TCP11L2Q8N4U5 519 aa20.35■□□□□ 0.85
TSPAN4-211ENST00000468468 CLUAP1Q96AJ1 413 aa20.35■□□□□ 0.85
TSPAN4-211ENST00000468468 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-211ENST00000468468 ARHGEF40Q8TER5 1519 aa20.34■□□□□ 0.85
TSPAN4-211ENST00000468468 TULP4Q9NRJ4 1543 aa20.34■□□□□ 0.85
TSPAN4-211ENST00000468468 EVC2Q86UK5 1308 aa20.34■□□□□ 0.85
TSPAN4-211ENST00000468468 CABP2Q9NPB3 220 aa20.34■□□□□ 0.85
TSPAN4-211ENST00000468468 MTHFSP49914 203 aa20.33■□□□□ 0.84
TSPAN4-211ENST00000468468 NFKBIBQ15653 356 aa20.33■□□□□ 0.84
TSPAN4-211ENST00000468468 RARSP54136 660 aaKnown RBP20.31■□□□□ 0.84
TSPAN4-211ENST00000468468 CFAP53Q96M91 514 aa20.31■□□□□ 0.84
TSPAN4-211ENST00000468468 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-211ENST00000468468 WDR63Q8IWG1 891 aa20.3■□□□□ 0.84
TSPAN4-211ENST00000468468 IQSEC2Q5JU85 1478 aa20.29■□□□□ 0.84
TSPAN4-211ENST00000468468 PRAM1Q96QH2 718 aa20.29■□□□□ 0.84
TSPAN4-211ENST00000468468 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-211ENST00000468468 SPATA31D1Q6ZQQ2 1576 aa20.29■□□□□ 0.84
TSPAN4-211ENST00000468468 A2ML1A8K2U0 1454 aa20.29■□□□□ 0.84
TSPAN4-211ENST00000468468 YTHDC2Q9H6S0 1430 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-211ENST00000468468 MINK1Q8N4C8 1332 aaPredicted RBP20.28■□□□□ 0.84
TSPAN4-211ENST00000468468 ESF1Q9H501 851 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-211ENST00000468468 MAPK8IP3Q9UPT6 1336 aa20.28■□□□□ 0.84
TSPAN4-211ENST00000468468 PTPRMP28827 1452 aa20.28■□□□□ 0.84
TSPAN4-211ENST00000468468 ALKQ9UM73 1620 aa20.27■□□□□ 0.84
TSPAN4-211ENST00000468468 USP32Q8NFA0 1604 aa20.26■□□□□ 0.83
TSPAN4-211ENST00000468468 SRPK2P78362 688 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-211ENST00000468468 POGKQ9P215 609 aa20.26■□□□□ 0.83
TSPAN4-211ENST00000468468 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
TSPAN4-211ENST00000468468 CCDC27Q2M243 656 aa20.25■□□□□ 0.83
TSPAN4-211ENST00000468468 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
TSPAN4-211ENST00000468468 PUS7Q96PZ0 661 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-211ENST00000468468 TNNQ9UQP3 1299 aa20.25■□□□□ 0.83
TSPAN4-211ENST00000468468 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
TSPAN4-211ENST00000468468 RIMS2Q9UQ26 1411 aa20.24■□□□□ 0.83
TSPAN4-211ENST00000468468 RLBP1P12271 317 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 984.2 ms