RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 RCCD1A6NED2 376 aa6.34□□□□□ -1.39
HMGB1P25-201ENST00000468402 ITGBL1O95965 494 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P25-201ENST00000468402 RBM27Q9P2N5 1060 aaKnown RBP6.34□□□□□ -1.39
HMGB1P25-201ENST00000468402 PPP4CP60510 307 aa6.33□□□□□ -1.4
HMGB1P25-201ENST00000468402 PPP2R2DQ66LE6 453 aa6.33□□□□□ -1.4
HMGB1P25-201ENST00000468402 LAPTM4BQ86VI4 370 aa6.33□□□□□ -1.4
HMGB1P25-201ENST00000468402 MTMR14Q8NCE2 650 aa6.33□□□□□ -1.4
HMGB1P25-201ENST00000468402 TSR3Q9UJK0 312 aaKnown RBP6.33□□□□□ -1.4
HMGB1P25-201ENST00000468402 MOXD2PA6NHM9 499 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 SPTLC1O15269 473 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 PPP1R15AO75807 674 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 NDUFV2P19404 249 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 PDE4CQ08493 712 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 FBXO31Q5XUX0 539 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 ZNF787Q6DD87 383 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 RDH13Q8NBN7 331 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 TTC13Q8NBP0 860 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 GLMNQ92990 594 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 PRKD2Q9BZL6 878 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 GZF1Q9H116 711 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 TBC1D2BQ9UPU7 963 aa6.32□□□□□ -1.4
HMGB1P25-201ENST00000468402 CD46P15529 392 aa6.31□□□□□ -1.4
HMGB1P25-201ENST00000468402 COL9A1P20849 921 aa6.31□□□□□ -1.4
HMGB1P25-201ENST00000468402 RFX1P22670 979 aa6.31□□□□□ -1.4
HMGB1P25-201ENST00000468402 TMCO4Q5TGY1 634 aa6.31□□□□□ -1.4
HMGB1P25-201ENST00000468402 RSBN1LQ6PCB5 846 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P25-201ENST00000468402 POM121CA8CG34 1229 aa6.3□□□□□ -1.4
HMGB1P25-201ENST00000468402 HDGFP51858 240 aaKnown RBP6.3□□□□□ -1.4
HMGB1P25-201ENST00000468402 QPCTQ16769 361 aa6.3□□□□□ -1.4
HMGB1P25-201ENST00000468402 NUDT18Q6ZVK8 323 aa6.3□□□□□ -1.4
HMGB1P25-201ENST00000468402 PCDHB15Q9Y5E8 787 aa6.3□□□□□ -1.4
HMGB1P25-201ENST00000468402 DNAJB2P25686 324 aa6.29□□□□□ -1.4
HMGB1P25-201ENST00000468402 FAM98CQ17RN3 349 aaKnown RBP6.29□□□□□ -1.4
HMGB1P25-201ENST00000468402 RTL5Q5HYW3 569 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P25-201ENST00000468402 RSPH4AQ5TD94 716 aa6.29□□□□□ -1.4
HMGB1P25-201ENST00000468402 HDGFL1Q5TGJ6 251 aa6.29□□□□□ -1.4
HMGB1P25-201ENST00000468402 PACS2Q86VP3 889 aa6.29□□□□□ -1.4
HMGB1P25-201ENST00000468402 CABLES1Q8TDN4 633 aa6.29□□□□□ -1.4
HMGB1P25-201ENST00000468402 TSC1Q92574 1164 aa6.29□□□□□ -1.4
HMGB1P25-201ENST00000468402 PNMA3Q9UL41 463 aa6.29□□□□□ -1.4
HMGB1P25-201ENST00000468402 NBPF26B4DH59 902 aa6.28□□□□□ -1.4
HMGB1P25-201ENST00000468402 LILRB3O75022 631 aa6.28□□□□□ -1.4
HMGB1P25-201ENST00000468402 USP17L8P0C7I0 530 aa6.28□□□□□ -1.4
HMGB1P25-201ENST00000468402 IRF5Q13568 498 aa6.28□□□□□ -1.4
HMGB1P25-201ENST00000468402 TUSC1Q2TAM9 212 aa6.28□□□□□ -1.4
HMGB1P25-201ENST00000468402 EYA1Q99502 592 aa6.28□□□□□ -1.4
HMGB1P25-201ENST00000468402 NRG2O14511 850 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P25-201ENST00000468402 KDM4AO75164 1064 aa6.27□□□□□ -1.41
HMGB1P25-201ENST00000468402 PDZRN3Q9UPQ7 1066 aa6.27□□□□□ -1.41
HMGB1P25-201ENST00000468402 NDUFB9Q9Y6M9 179 aa6.27□□□□□ -1.41
HMGB1P25-201ENST00000468402 TRIM6-TRIM34B2RNG4 842 aa6.26□□□□□ -1.41
HMGB1P25-201ENST00000468402 CSB-PGBD3P0DP91 1061 aa6.26□□□□□ -1.41
HMGB1P25-201ENST00000468402 GGCXP38435 758 aa6.26□□□□□ -1.41
HMGB1P25-201ENST00000468402 TATDN2Q93075 761 aa6.26□□□□□ -1.41
HMGB1P25-201ENST00000468402 ZBTB3Q9H5J0 574 aa6.26□□□□□ -1.41
HMGB1P25-201ENST00000468402 FAM198AQ9UFP1 575 aa6.26□□□□□ -1.41
HMGB1P25-201ENST00000468402 FDX1P10109 184 aa6.25□□□□□ -1.41
HMGB1P25-201ENST00000468402 GJA5P36382 358 aa6.25□□□□□ -1.41
HMGB1P25-201ENST00000468402 WASHC4Q2M389 1173 aa6.25□□□□□ -1.41
HMGB1P25-201ENST00000468402 PBXIP1Q96AQ6 731 aa6.25□□□□□ -1.41
HMGB1P25-201ENST00000468402 TSKSQ9UJT2 592 aa6.25□□□□□ -1.41
HMGB1P25-201ENST00000468402 PATL2C9JE40 543 aaKnown RBP6.24□□□□□ -1.41
HMGB1P25-201ENST00000468402 SMAPO00193 183 aa6.24□□□□□ -1.41
HMGB1P25-201ENST00000468402 SLC4A3P48751 1232 aa6.24□□□□□ -1.41
HMGB1P25-201ENST00000468402 MFAP1P55081 439 aaKnown RBP6.24□□□□□ -1.41
HMGB1P25-201ENST00000468402 PRPF38BQ5VTL8 546 aaKnown RBP6.24□□□□□ -1.41
HMGB1P25-201ENST00000468402 TMEM134Q9H6X4 195 aa6.24□□□□□ -1.41
HMGB1P25-201ENST00000468402 MTMR7Q9Y216 660 aa6.24□□□□□ -1.41
HMGB1P25-201ENST00000468402 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P25-201ENST00000468402 SOCS7O14512 581 aa6.23□□□□□ -1.41
HMGB1P25-201ENST00000468402 USP46P62068 366 aa6.23□□□□□ -1.41
HMGB1P25-201ENST00000468402 CTDSPL2Q05D32 466 aa6.23□□□□□ -1.41
HMGB1P25-201ENST00000468402 HELBQ8NG08 1087 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P25-201ENST00000468402 VAC14Q08AM6 782 aa6.22□□□□□ -1.41
HMGB1P25-201ENST00000468402 PPP1R18Q6NYC8 613 aa6.22□□□□□ -1.41
HMGB1P25-201ENST00000468402 IL21Q9HBE4 155 aa6.22□□□□□ -1.41
HMGB1P25-201ENST00000468402 C3orf80F5H4A9 247 aa6.21□□□□□ -1.42
HMGB1P25-201ENST00000468402 LMOD1P29536 600 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P25-201ENST00000468402 GCGRP47871 477 aa6.21□□□□□ -1.42
HMGB1P25-201ENST00000468402 RBM25P49756 843 aaKnown RBP6.21□□□□□ -1.42
HMGB1P25-201ENST00000468402 PKDCCQ504Y2 493 aa6.21□□□□□ -1.42
HMGB1P25-201ENST00000468402 FOXD4L5Q5VV16 416 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P25-201ENST00000468402 SAMD7Q7Z3H4 446 aa6.21□□□□□ -1.42
HMGB1P25-201ENST00000468402 FOXD4L4Q8WXT5 416 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P25-201ENST00000468402 MTRQ99707 1265 aa6.21□□□□□ -1.42
HMGB1P25-201ENST00000468402 C6orf229H3BNL8 230 aa6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 HOXA2O43364 376 aa6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 GUCA2AQ02747 115 aa6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 MTMR2Q13614 643 aa6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 CDCA8Q53HL2 280 aa6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 RGS22Q8NE09 1264 aa6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 GJD4Q96KN9 370 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 PPP1R12CQ9BZL4 782 aa6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 HMX1Q9NP08 348 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.2□□□□□ -1.42
HMGB1P25-201ENST00000468402 BRD1O95696 1058 aa6.19□□□□□ -1.42
HMGB1P25-201ENST00000468402 COPS2P61201 443 aa6.19□□□□□ -1.42
HMGB1P25-201ENST00000468402 LRRN4Q8WUT4 740 aa6.19□□□□□ -1.42
HMGB1P25-201ENST00000468402 PALM3A6NDB9 673 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P25-201ENST00000468402 KCNA1Q09470 495 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms