RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CADPS2Q86UW7 1296 aa16.35■□□□□ 0.21
COL4A6-205ENST00000468338 IFNLR1Q8IU57 520 aaPredicted RBP16.35■□□□□ 0.21
COL4A6-205ENST00000468338 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
COL4A6-205ENST00000468338 C14orf93Q9H972 538 aaKnown RBP16.34■□□□□ 0.21
COL4A6-205ENST00000468338 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
COL4A6-205ENST00000468338 ROBO1Q9Y6N7 1651 aa16.34■□□□□ 0.21
COL4A6-205ENST00000468338 C14orf37Q86TY3 774 aa16.33■□□□□ 0.2
COL4A6-205ENST00000468338 STAC3Q96MF2 364 aa16.33■□□□□ 0.2
COL4A6-205ENST00000468338 TECPR2O15040 1411 aa16.33■□□□□ 0.2
COL4A6-205ENST00000468338 ADGRL3Q9HAR2 1447 aa16.33■□□□□ 0.2
COL4A6-205ENST00000468338 ASXL1Q8IXJ9 1541 aa16.33■□□□□ 0.2
COL4A6-205ENST00000468338 ABCC11Q96J66 1382 aa16.32■□□□□ 0.2
COL4A6-205ENST00000468338 LRPPRCP42704 1394 aaKnown RBP16.31■□□□□ 0.2
COL4A6-205ENST00000468338 ATF3P18847 181 aa16.31■□□□□ 0.2
COL4A6-205ENST00000468338 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
COL4A6-205ENST00000468338 PLCB2Q00722 1185 aa16.3■□□□□ 0.2
COL4A6-205ENST00000468338 NALCNQ8IZF0 1738 aa16.29■□□□□ 0.2
COL4A6-205ENST00000468338 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
COL4A6-205ENST00000468338 MST1RQ04912 1400 aa16.28■□□□□ 0.2
COL4A6-205ENST00000468338 LAMC1P11047 1609 aa16.28■□□□□ 0.2
COL4A6-205ENST00000468338 CFAP70Q5T0N1 1121 aa16.28■□□□□ 0.2
COL4A6-205ENST00000468338 SIRT1Q96EB6 747 aa16.28■□□□□ 0.2
COL4A6-205ENST00000468338 KNDC1Q76NI1 1749 aa16.28■□□□□ 0.2
COL4A6-205ENST00000468338 YTHDC2Q9H6S0 1430 aaKnown RBP16.28■□□□□ 0.2
COL4A6-205ENST00000468338 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
COL4A6-205ENST00000468338 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
COL4A6-205ENST00000468338 BRINP3Q76B58 766 aa16.25■□□□□ 0.19
COL4A6-205ENST00000468338 ADGRB1O14514 1584 aa16.25■□□□□ 0.19
COL4A6-205ENST00000468338 AHDC1Q5TGY3 1603 aaPredicted RBP16.24■□□□□ 0.19
COL4A6-205ENST00000468338 STK26Q9P289 416 aa16.23■□□□□ 0.19
COL4A6-205ENST00000468338 DISP3Q9P2K9 1392 aa16.23■□□□□ 0.19
COL4A6-205ENST00000468338 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
COL4A6-205ENST00000468338 KDM2AQ9Y2K7 1162 aa16.22■□□□□ 0.19
COL4A6-205ENST00000468338 COL16A1Q07092 1604 aaPredicted RBP16.22■□□□□ 0.19
COL4A6-205ENST00000468338 PLEKHH1Q9ULM0 1364 aa16.22■□□□□ 0.19
COL4A6-205ENST00000468338 PHLPP1O60346 1717 aa16.22■□□□□ 0.19
COL4A6-205ENST00000468338 C1orf167Q5SNV9 1468 aa16.22■□□□□ 0.19
COL4A6-205ENST00000468338 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
COL4A6-205ENST00000468338 DLC1Q96QB1 1528 aa16.21■□□□□ 0.19
COL4A6-205ENST00000468338 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.18
COL4A6-205ENST00000468338 ABCB7O75027 752 aa16.2■□□□□ 0.18
COL4A6-205ENST00000468338 NHSL1Q5SYE7 1610 aa16.18■□□□□ 0.18
COL4A6-205ENST00000468338 JCADQ9P266 1359 aa16.17■□□□□ 0.18
COL4A6-205ENST00000468338 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
COL4A6-205ENST00000468338 KIAA1210Q9ULL0 1709 aa16.16■□□□□ 0.18
COL4A6-205ENST00000468338 L3MBTL2Q969R5 705 aa16.15■□□□□ 0.18
COL4A6-205ENST00000468338 ORAI2Q96SN7 254 aa16.15■□□□□ 0.18
COL4A6-205ENST00000468338 PRAM1Q96QH2 718 aa16.14■□□□□ 0.17
COL4A6-205ENST00000468338 ILDR2Q71H61 639 aa16.13■□□□□ 0.17
COL4A6-205ENST00000468338 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
COL4A6-205ENST00000468338 TRAK1Q9UPV9 953 aa16.13■□□□□ 0.17
COL4A6-205ENST00000468338 FMN2Q9NZ56 1722 aa16.13■□□□□ 0.17
COL4A6-205ENST00000468338 SOS2Q07890 1332 aaPredicted RBP16.13■□□□□ 0.17
COL4A6-205ENST00000468338 SHPRHQ149N8 1683 aa16.12■□□□□ 0.17
COL4A6-205ENST00000468338 HAP1P54257 671 aaPredicted RBP16.12■□□□□ 0.17
COL4A6-205ENST00000468338 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
COL4A6-205ENST00000468338 LRRC59Q96AG4 307 aaKnown RBP16.11■□□□□ 0.17
COL4A6-205ENST00000468338 ADGRB2O60241 1585 aa16.11■□□□□ 0.17
COL4A6-205ENST00000468338 SPATA31A6Q5VVP1 1343 aa16.11■□□□□ 0.17
COL4A6-205ENST00000468338 NBPF1Q3BBV0 1214 aa16.1■□□□□ 0.17
COL4A6-205ENST00000468338 POGKQ9P215 609 aa16.1■□□□□ 0.17
COL4A6-205ENST00000468338 ARHGEF28Q8N1W1 1705 aaKnown RBP16.09■□□□□ 0.17
COL4A6-205ENST00000468338 ZNF692Q9BU19 519 aaPredicted RBP16.09■□□□□ 0.17
COL4A6-205ENST00000468338 RGS17Q9UGC6 210 aaPredicted RBP16.09■□□□□ 0.17
COL4A6-205ENST00000468338 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
COL4A6-205ENST00000468338 SAFB2Q14151 953 aaKnown RBP eCLIP16.08■□□□□ 0.16
COL4A6-205ENST00000468338 ESCO1Q5FWF5 840 aa16.08■□□□□ 0.16
COL4A6-205ENST00000468338 SPOCK2Q92563 424 aa16.08■□□□□ 0.16
COL4A6-205ENST00000468338 RGPD8O14715 1765 aaPredicted RBP16.06■□□□□ 0.16
COL4A6-205ENST00000468338 LRP6O75581 1613 aa16.06■□□□□ 0.16
COL4A6-205ENST00000468338 PNPLA6Q8IY17 1366 aa16.06■□□□□ 0.16
COL4A6-205ENST00000468338 NPHP3Q7Z494 1330 aa16.06■□□□□ 0.16
COL4A6-205ENST00000468338 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
COL4A6-205ENST00000468338 PXDNQ92626 1479 aa16.05■□□□□ 0.16
COL4A6-205ENST00000468338 ANKARQ7Z5J8 1434 aa16.05■□□□□ 0.16
COL4A6-205ENST00000468338 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
COL4A6-205ENST00000468338 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
COL4A6-205ENST00000468338 FOXO3O43524 673 aa16.04■□□□□ 0.16
COL4A6-205ENST00000468338 KIF1AQ12756 1690 aa16.04■□□□□ 0.16
COL4A6-205ENST00000468338 MINK1Q8N4C8 1332 aaPredicted RBP16.03■□□□□ 0.16
COL4A6-205ENST00000468338 TRPM1Q7Z4N2 1603 aa16.03■□□□□ 0.16
COL4A6-205ENST00000468338 HIRIP3Q9BW71 556 aaPredicted RBP16.02■□□□□ 0.16
COL4A6-205ENST00000468338 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.16
COL4A6-205ENST00000468338 PRR36Q9H6K5 1346 aa16.01■□□□□ 0.15
COL4A6-205ENST00000468338 TULP4Q9NRJ4 1543 aa16.01■□□□□ 0.15
COL4A6-205ENST00000468338 NBPF8Q3BBV2 869 aa16.01■□□□□ 0.15
COL4A6-205ENST00000468338 EIF3AQ14152 1382 aaKnown RBP16■□□□□ 0.15
COL4A6-205ENST00000468338 COL22A1Q8NFW1 1626 aaPredicted RBP16■□□□□ 0.15
COL4A6-205ENST00000468338 GPRASP1Q5JY77 1395 aa16■□□□□ 0.15
COL4A6-205ENST00000468338 SPDYE2BA6NHP3 402 aa15.99■□□□□ 0.15
COL4A6-205ENST00000468338 SPDYE6P0CI01 402 aa15.99■□□□□ 0.15
COL4A6-205ENST00000468338 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
COL4A6-205ENST00000468338 POTEAQ6S8J7 498 aa15.98■□□□□ 0.15
COL4A6-205ENST00000468338 SPATA31A3Q5VYP0 1347 aa15.97■□□□□ 0.15
COL4A6-205ENST00000468338 XPCQ01831 940 aaPredicted RBP15.97■□□□□ 0.15
COL4A6-205ENST00000468338 KRT28Q7Z3Y7 464 aa15.97■□□□□ 0.15
COL4A6-205ENST00000468338 TONSLQ96HA7 1378 aa15.97■□□□□ 0.15
COL4A6-205ENST00000468338 ATP7BP35670 1465 aa15.97■□□□□ 0.15
COL4A6-205ENST00000468338 CENPJQ9HC77 1338 aaPredicted RBP15.96■□□□□ 0.15
COL4A6-205ENST00000468338 NUTM2BA6NNL0 878 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms