RNA–Protein interactions for RNA: ENST00000468286.5

SGIP1-207, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 846 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-207ENST00000468286 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
SGIP1-207ENST00000468286 NFX1Q12986 1120 aaKnown RBP13.94□□□□□ -0.18
SGIP1-207ENST00000468286 SNIP1Q8TAD8 396 aaKnown RBP13.94□□□□□ -0.18
SGIP1-207ENST00000468286 PHOX2BQ99453 314 aa13.94□□□□□ -0.18
SGIP1-207ENST00000468286 RNF19BQ6ZMZ0 732 aa13.93□□□□□ -0.18
SGIP1-207ENST00000468286 NLRP7Q8WX94 980 aa13.93□□□□□ -0.18
SGIP1-207ENST00000468286 WIPF1O43516 503 aa13.92□□□□□ -0.18
SGIP1-207ENST00000468286 MMP16P51512 607 aa13.92□□□□□ -0.18
SGIP1-207ENST00000468286 SMPD1P17405 629 aa13.91□□□□□ -0.18
SGIP1-207ENST00000468286 Q3C1V9 767 aa13.91□□□□□ -0.18
SGIP1-207ENST00000468286 TRIM32Q13049 653 aa13.9□□□□□ -0.18
SGIP1-207ENST00000468286 STK17AQ9UEE5 414 aa13.89□□□□□ -0.19
SGIP1-207ENST00000468286 ATP13A2Q9NQ11 1180 aa13.88□□□□□ -0.19
SGIP1-207ENST00000468286 MRGPRX2Q96LB1 330 aa13.86□□□□□ -0.19
SGIP1-207ENST00000468286 INSM1Q01101 510 aaPredicted RBP13.85□□□□□ -0.19
SGIP1-207ENST00000468286 REPIN1Q9BWE0 567 aaKnown RBP13.85□□□□□ -0.19
SGIP1-207ENST00000468286 SENP2Q9HC62 589 aa13.85□□□□□ -0.19
SGIP1-207ENST00000468286 TRIM47Q96LD4 638 aa13.84□□□□□ -0.19
SGIP1-207ENST00000468286 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
SGIP1-207ENST00000468286 USB1Q9BQ65 265 aaKnown RBP13.82□□□□□ -0.2
SGIP1-207ENST00000468286 J3QL48 77 aa13.81□□□□□ -0.2
SGIP1-207ENST00000468286 SNRPBP14678 240 aaKnown RBP13.81□□□□□ -0.2
SGIP1-207ENST00000468286 CD46P15529 392 aa13.81□□□□□ -0.2
SGIP1-207ENST00000468286 TERTO14746 1132 aaKnown RBP13.79□□□□□ -0.2
SGIP1-207ENST00000468286 GPIHBP1Q8IV16 184 aa13.79□□□□□ -0.2
SGIP1-207ENST00000468286 KIFC2Q96AC6 838 aa13.79□□□□□ -0.2
SGIP1-207ENST00000468286 KDM4AO75164 1064 aa13.77□□□□□ -0.21
SGIP1-207ENST00000468286 WNT7BP56706 349 aa13.77□□□□□ -0.21
SGIP1-207ENST00000468286 USP46P62068 366 aa13.76□□□□□ -0.21
SGIP1-207ENST00000468286 LCE2CQ5TA81 110 aa13.76□□□□□ -0.21
SGIP1-207ENST00000468286 HPS1Q92902 700 aa13.76□□□□□ -0.21
SGIP1-207ENST00000468286 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
SGIP1-207ENST00000468286 SKOR1P84550 965 aa13.72□□□□□ -0.21
SGIP1-207ENST00000468286 MAP2K5Q13163 448 aa13.7□□□□□ -0.22
SGIP1-207ENST00000468286 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
SGIP1-207ENST00000468286 HOXA2O43364 376 aa13.67□□□□□ -0.22
SGIP1-207ENST00000468286 HLA-CQ95604 372 aa13.66□□□□□ -0.22
SGIP1-207ENST00000468286 JUNDP17535 347 aa13.65□□□□□ -0.22
SGIP1-207ENST00000468286 IRF6O14896 467 aa13.64□□□□□ -0.23
SGIP1-207ENST00000468286 ALDH1A1P00352 501 aa13.63□□□□□ -0.23
SGIP1-207ENST00000468286 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
SGIP1-207ENST00000468286 SIAH2O43255 324 aa13.61□□□□□ -0.23
SGIP1-207ENST00000468286 MDM2Q00987 491 aaPredicted RBP13.61□□□□□ -0.23
SGIP1-207ENST00000468286 NPAS3Q8IXF0 933 aa13.61□□□□□ -0.23
SGIP1-207ENST00000468286 NXF1Q9UBU9 619 aaKnown RBP13.6□□□□□ -0.23
SGIP1-207ENST00000468286 PLCB2Q00722 1185 aa13.58□□□□□ -0.24
SGIP1-207ENST00000468286 RETREG3Q86VR2 466 aa13.58□□□□□ -0.24
SGIP1-207ENST00000468286 MINK1Q8N4C8 1332 aaPredicted RBP13.58□□□□□ -0.24
SGIP1-207ENST00000468286 FAM181BA6NEQ2 426 aa13.57□□□□□ -0.24
SGIP1-207ENST00000468286 EHBP1Q8NDI1 1231 aa13.57□□□□□ -0.24
SGIP1-207ENST00000468286 NUDT12Q9BQG2 462 aa13.57□□□□□ -0.24
SGIP1-207ENST00000468286 GUCA2AQ02747 115 aa13.56□□□□□ -0.24
SGIP1-207ENST00000468286 PTCRAQ6ISU1 281 aaPredicted RBP13.55□□□□□ -0.24
SGIP1-207ENST00000468286 CAPN5O15484 640 aaPredicted RBP13.54□□□□□ -0.24
SGIP1-207ENST00000468286 TRIM46Q7Z4K8 759 aa13.54□□□□□ -0.24
SGIP1-207ENST00000468286 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
SGIP1-207ENST00000468286 SYMPKQ92797 1274 aaKnown RBP13.53□□□□□ -0.24
SGIP1-207ENST00000468286 FAM217BQ9NTX9 383 aaPredicted RBP13.53□□□□□ -0.24
SGIP1-207ENST00000468286 WASF2Q9Y6W5 498 aa13.53□□□□□ -0.24
SGIP1-207ENST00000468286 CLCN1P35523 988 aa13.52□□□□□ -0.25
SGIP1-207ENST00000468286 IRF7Q92985 503 aa13.52□□□□□ -0.25
SGIP1-207ENST00000468286 BMP1P13497 986 aa13.51□□□□□ -0.25
SGIP1-207ENST00000468286 GMPRP36959 345 aa13.51□□□□□ -0.25
SGIP1-207ENST00000468286 LORP23490 312 aaPredicted RBP13.49□□□□□ -0.25
SGIP1-207ENST00000468286 SH3BP2P78314 561 aa13.49□□□□□ -0.25
SGIP1-207ENST00000468286 NUTM1Q86Y26 1132 aa13.49□□□□□ -0.25
SGIP1-207ENST00000468286 CCDC102AQ96A19 550 aa13.49□□□□□ -0.25
SGIP1-207ENST00000468286 H3BM21 787 aa13.48□□□□□ -0.25
SGIP1-207ENST00000468286 CCNYL3P0C7X3 344 aa13.48□□□□□ -0.25
SGIP1-207ENST00000468286 ZSCAN1Q8NBB4 408 aa13.48□□□□□ -0.25
SGIP1-207ENST00000468286 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
SGIP1-207ENST00000468286 MS4A1P11836 297 aa13.47□□□□□ -0.25
SGIP1-207ENST00000468286 FDX1P10109 184 aa13.45□□□□□ -0.26
SGIP1-207ENST00000468286 PTPRNQ16849 979 aa13.45□□□□□ -0.26
SGIP1-207ENST00000468286 PCDHGC3Q9UN70 934 aa13.45□□□□□ -0.26
SGIP1-207ENST00000468286 MPNDQ8N594 471 aa13.44□□□□□ -0.26
SGIP1-207ENST00000468286 EVA1BQ9NVM1 165 aa13.43□□□□□ -0.26
SGIP1-207ENST00000468286 C6orf229H3BNL8 230 aa13.42□□□□□ -0.26
SGIP1-207ENST00000468286 UNC93B1Q9H1C4 597 aa13.42□□□□□ -0.26
SGIP1-207ENST00000468286 ZFP42Q96MM3 310 aa13.41□□□□□ -0.26
SGIP1-207ENST00000468286 PLEKHG3A1L390 1219 aa13.4□□□□□ -0.26
SGIP1-207ENST00000468286 VARSP26640 1264 aaKnown RBP13.39□□□□□ -0.27
SGIP1-207ENST00000468286 VEGFBP49765 207 aa13.39□□□□□ -0.27
SGIP1-207ENST00000468286 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
SGIP1-207ENST00000468286 KCNH2Q12809 1159 aa13.38□□□□□ -0.27
SGIP1-207ENST00000468286 KRI1Q8N9T8 703 aaKnown RBP13.38□□□□□ -0.27
SGIP1-207ENST00000468286 TLL2Q9Y6L7 1015 aa13.38□□□□□ -0.27
SGIP1-207ENST00000468286 DESI1Q6ICB0 168 aa13.37□□□□□ -0.27
SGIP1-207ENST00000468286 ZNF511Q8NB15 262 aa13.37□□□□□ -0.27
SGIP1-207ENST00000468286 BAP1Q92560 729 aa13.37□□□□□ -0.27
SGIP1-207ENST00000468286 NNTQ13423 1086 aa13.35□□□□□ -0.27
SGIP1-207ENST00000468286 KDM2AQ9Y2K7 1162 aa13.35□□□□□ -0.27
SGIP1-207ENST00000468286 LINC01559Q495D7 138 aa13.34□□□□□ -0.27
SGIP1-207ENST00000468286 MRPL14Q6P1L8 145 aaKnown RBP13.34□□□□□ -0.27
SGIP1-207ENST00000468286 SPIRE2Q8WWL2 714 aa13.34□□□□□ -0.27
SGIP1-207ENST00000468286 SPDYE5A6NIY4 337 aa13.33□□□□□ -0.28
SGIP1-207ENST00000468286 SCARF1Q14162 830 aa13.33□□□□□ -0.28
SGIP1-207ENST00000468286 VSIG8P0DPA2 414 aa13.32□□□□□ -0.28
SGIP1-207ENST00000468286 PRR7Q8TB68 274 aa13.32□□□□□ -0.28
SGIP1-207ENST00000468286 ADH1CP00326 375 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms