RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 LRRC59Q96AG4 307 aaKnown RBP19.79■□□□□ 0.76
C9orf3-212ENST00000468164 NUTM2FA1L443 756 aa19.77■□□□□ 0.76
C9orf3-212ENST00000468164 LRPPRCP42704 1394 aaKnown RBP19.77■□□□□ 0.76
C9orf3-212ENST00000468164 FMN2Q9NZ56 1722 aa19.76■□□□□ 0.75
C9orf3-212ENST00000468164 YTHDC2Q9H6S0 1430 aaKnown RBP19.76■□□□□ 0.75
C9orf3-212ENST00000468164 PLEKHH1Q9ULM0 1364 aa19.75■□□□□ 0.75
C9orf3-212ENST00000468164 TECPR2O15040 1411 aa19.75■□□□□ 0.75
C9orf3-212ENST00000468164 MYOM2P54296 1465 aa19.74■□□□□ 0.75
C9orf3-212ENST00000468164 ESCO1Q5FWF5 840 aa19.74■□□□□ 0.75
C9orf3-212ENST00000468164 CFAP70Q5T0N1 1121 aa19.74■□□□□ 0.75
C9orf3-212ENST00000468164 PNPLA6Q8IY17 1366 aa19.73■□□□□ 0.75
C9orf3-212ENST00000468164 ABCC11Q96J66 1382 aa19.72■□□□□ 0.75
C9orf3-212ENST00000468164 ZNF772Q68DY9 489 aaPredicted RBP19.72■□□□□ 0.75
C9orf3-212ENST00000468164 C8orf37Q96NL8 207 aa19.71■□□□□ 0.75
C9orf3-212ENST00000468164 C14orf93Q9H972 538 aaKnown RBP19.71■□□□□ 0.75
C9orf3-212ENST00000468164 KDM2AQ9Y2K7 1162 aa19.71■□□□□ 0.75
C9orf3-212ENST00000468164 NRXN1Q9ULB1 1477 aa19.71■□□□□ 0.75
C9orf3-212ENST00000468164 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
C9orf3-212ENST00000468164 ADAMTS2O95450 1211 aa19.7■□□□□ 0.74
C9orf3-212ENST00000468164 SAFB2Q14151 953 aaKnown RBP eCLIP19.7■□□□□ 0.74
C9orf3-212ENST00000468164 AFF2P51816 1311 aa19.7■□□□□ 0.74
C9orf3-212ENST00000468164 XPCQ01831 940 aaPredicted RBP19.69■□□□□ 0.74
C9orf3-212ENST00000468164 MARF1Q9Y4F3 1742 aaKnown RBP19.68■□□□□ 0.74
C9orf3-212ENST00000468164 SOS2Q07890 1332 aaPredicted RBP19.68■□□□□ 0.74
C9orf3-212ENST00000468164 KIF1AQ12756 1690 aa19.68■□□□□ 0.74
C9orf3-212ENST00000468164 FOXO3O43524 673 aa19.67■□□□□ 0.74
C9orf3-212ENST00000468164 DCAF11Q8TEB1 546 aa19.67■□□□□ 0.74
C9orf3-212ENST00000468164 NPHP3Q7Z494 1330 aa19.67■□□□□ 0.74
C9orf3-212ENST00000468164 COL22A1Q8NFW1 1626 aaPredicted RBP19.66■□□□□ 0.74
C9orf3-212ENST00000468164 PRAM1Q96QH2 718 aa19.65■□□□□ 0.74
C9orf3-212ENST00000468164 POGKQ9P215 609 aa19.65■□□□□ 0.74
C9orf3-212ENST00000468164 NGLY1Q96IV0 654 aa19.64■□□□□ 0.73
C9orf3-212ENST00000468164 PXDNQ92626 1479 aa19.64■□□□□ 0.73
C9orf3-212ENST00000468164 HRCP23327 699 aa19.63■□□□□ 0.73
C9orf3-212ENST00000468164 RXRBP28702 533 aa19.63■□□□□ 0.73
C9orf3-212ENST00000468164 TRAK1Q9UPV9 953 aa19.62■□□□□ 0.73
C9orf3-212ENST00000468164 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
C9orf3-212ENST00000468164 DLC1Q96QB1 1528 aa19.61■□□□□ 0.73
C9orf3-212ENST00000468164 SIRT1Q96EB6 747 aa19.6■□□□□ 0.73
C9orf3-212ENST00000468164 ARHGEF28Q8N1W1 1705 aaKnown RBP19.59■□□□□ 0.73
C9orf3-212ENST00000468164 PLEKHG5O94827 1062 aa19.59■□□□□ 0.73
C9orf3-212ENST00000468164 QTRT2Q9H974 415 aaKnown RBP19.59■□□□□ 0.73
C9orf3-212ENST00000468164 USP32Q8NFA0 1604 aa19.58■□□□□ 0.73
C9orf3-212ENST00000468164 HIRIP3Q9BW71 556 aaPredicted RBP19.58■□□□□ 0.72
C9orf3-212ENST00000468164 MINK1Q8N4C8 1332 aaPredicted RBP19.56■□□□□ 0.72
C9orf3-212ENST00000468164 KRT28Q7Z3Y7 464 aa19.56■□□□□ 0.72
C9orf3-212ENST00000468164 USP21Q9UK80 565 aa19.56■□□□□ 0.72
C9orf3-212ENST00000468164 PHF8Q9UPP1 1060 aa19.56■□□□□ 0.72
C9orf3-212ENST00000468164 ADGRB2O60241 1585 aa19.56■□□□□ 0.72
C9orf3-212ENST00000468164 LMOD2Q6P5Q4 547 aa19.54■□□□□ 0.72
C9orf3-212ENST00000468164 RBM6P78332 1123 aaKnown RBP19.53■□□□□ 0.72
C9orf3-212ENST00000468164 PMFBP1Q8TBY8 1022 aa19.53■□□□□ 0.72
C9orf3-212ENST00000468164 ITSN1Q15811 1721 aa19.53■□□□□ 0.72
C9orf3-212ENST00000468164 ABCA3Q99758 1704 aa19.52■□□□□ 0.72
C9orf3-212ENST00000468164 KIAA1210Q9ULL0 1709 aa19.52■□□□□ 0.72
C9orf3-212ENST00000468164 HAP1P54257 671 aaPredicted RBP19.52■□□□□ 0.72
C9orf3-212ENST00000468164 PSME1Q06323 249 aa19.52■□□□□ 0.72
C9orf3-212ENST00000468164 CDK12Q9NYV4 1490 aaPredicted RBP19.52■□□□□ 0.72
C9orf3-212ENST00000468164 SPATA31A3Q5VYP0 1347 aa19.51■□□□□ 0.71
C9orf3-212ENST00000468164 RGS12O14924 1447 aa19.51■□□□□ 0.71
C9orf3-212ENST00000468164 STAC3Q96MF2 364 aa19.51■□□□□ 0.71
C9orf3-212ENST00000468164 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
C9orf3-212ENST00000468164 TRPC5Q9UL62 973 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-212ENST00000468164 ANKARQ7Z5J8 1434 aa19.49■□□□□ 0.71
C9orf3-212ENST00000468164 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.48■□□□□ 0.71
C9orf3-212ENST00000468164 TULP4Q9NRJ4 1543 aa19.48■□□□□ 0.71
C9orf3-212ENST00000468164 UPF1Q92900 1129 aaKnown RBP eCLIP19.48■□□□□ 0.71
C9orf3-212ENST00000468164 PLCH1Q4KWH8 1693 aa19.48■□□□□ 0.71
C9orf3-212ENST00000468164 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
C9orf3-212ENST00000468164 FNBP4Q8N3X1 1017 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-212ENST00000468164 CABLES1Q8TDN4 633 aa19.47■□□□□ 0.71
C9orf3-212ENST00000468164 EIF3AQ14152 1382 aaKnown RBP19.45■□□□□ 0.7
C9orf3-212ENST00000468164 WASLO00401 505 aaPredicted RBP19.45■□□□□ 0.7
C9orf3-212ENST00000468164 PRR36Q9H6K5 1346 aa19.45■□□□□ 0.7
C9orf3-212ENST00000468164 ATRNO75882 1429 aa19.44■□□□□ 0.7
C9orf3-212ENST00000468164 ALS2Q96Q42 1657 aa19.44■□□□□ 0.7
C9orf3-212ENST00000468164 BCL9LQ86UU0 1499 aa19.44■□□□□ 0.7
C9orf3-212ENST00000468164 SBNO1A3KN83 1393 aa19.43■□□□□ 0.7
C9orf3-212ENST00000468164 GPRASP1Q5JY77 1395 aa19.43■□□□□ 0.7
C9orf3-212ENST00000468164 NBPF1Q3BBV0 1214 aa19.42■□□□□ 0.7
C9orf3-212ENST00000468164 NGDNQ8NEJ9 315 aaKnown RBP19.42■□□□□ 0.7
C9orf3-212ENST00000468164 QRICH2Q9H0J4 1663 aa19.42■□□□□ 0.7
C9orf3-212ENST00000468164 ARHGEF10O15013 1369 aa19.42■□□□□ 0.7
C9orf3-212ENST00000468164 NWD2Q9ULI1 1742 aa19.42■□□□□ 0.7
C9orf3-212ENST00000468164 BRWD3Q6RI45 1802 aa19.41■□□□□ 0.7
C9orf3-212ENST00000468164 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-212ENST00000468164 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
C9orf3-212ENST00000468164 TOPAZ1Q8N9V7 1692 aa19.4■□□□□ 0.7
C9orf3-212ENST00000468164 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.69
C9orf3-212ENST00000468164 ATP7BP35670 1465 aa19.39■□□□□ 0.69
C9orf3-212ENST00000468164 EP400Q96L91 3159 aa19.38■□□□□ 0.69
C9orf3-212ENST00000468164 SLIT2O94813 1529 aa19.38■□□□□ 0.69
C9orf3-212ENST00000468164 GLI3P10071 1580 aa19.38■□□□□ 0.69
C9orf3-212ENST00000468164 UNC5CLQ8IV45 518 aa19.38■□□□□ 0.69
C9orf3-212ENST00000468164 NUDT16Q96DE0 195 aaKnown RBP19.38■□□□□ 0.69
C9orf3-212ENST00000468164 GJD4Q96KN9 370 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-212ENST00000468164 CDK19Q9BWU1 502 aa19.38■□□□□ 0.69
C9orf3-212ENST00000468164 CRYBG1Q9Y4K1 1723 aa19.37■□□□□ 0.69
C9orf3-212ENST00000468164 CCDC9Q9Y3X0 531 aaKnown RBP19.37■□□□□ 0.69
C9orf3-212ENST00000468164 TRPM1Q7Z4N2 1603 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms