RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 KNDC1Q76NI1 1749 aa13.7□□□□□ -0.22
MSH5-213ENST00000468136 CGNL1Q0VF96 1302 aa13.7□□□□□ -0.22
MSH5-213ENST00000468136 CCDC184Q52MB2 194 aa13.7□□□□□ -0.22
MSH5-213ENST00000468136 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
MSH5-213ENST00000468136 DIP2AQ14689 1571 aa13.7□□□□□ -0.22
MSH5-213ENST00000468136 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
MSH5-213ENST00000468136 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
MSH5-213ENST00000468136 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
MSH5-213ENST00000468136 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
MSH5-213ENST00000468136 STK26Q9P289 416 aa13.69□□□□□ -0.22
MSH5-213ENST00000468136 NRXN3Q9Y4C0 1643 aa13.68□□□□□ -0.22
MSH5-213ENST00000468136 TBX22Q9Y458 520 aa13.68□□□□□ -0.22
MSH5-213ENST00000468136 PIK3R4Q99570 1358 aa13.68□□□□□ -0.22
MSH5-213ENST00000468136 TXNDC2Q86VQ3 553 aa13.67□□□□□ -0.22
MSH5-213ENST00000468136 CPS1P31327 1500 aa13.67□□□□□ -0.22
MSH5-213ENST00000468136 MED14O60244 1454 aa13.67□□□□□ -0.22
MSH5-213ENST00000468136 PPP2R1AP30153 589 aa13.66□□□□□ -0.22
MSH5-213ENST00000468136 SRPK2P78362 688 aaKnown RBP13.66□□□□□ -0.22
MSH5-213ENST00000468136 NGEFQ8N5V2 710 aa13.66□□□□□ -0.22
MSH5-213ENST00000468136 SETD1BQ9UPS6 1966 aaKnown RBP13.65□□□□□ -0.22
MSH5-213ENST00000468136 ADAMTS13Q76LX8 1427 aa13.65□□□□□ -0.22
MSH5-213ENST00000468136 PDE3BQ13370 1112 aa13.65□□□□□ -0.22
MSH5-213ENST00000468136 HDGFL2Q7Z4V5 671 aaPredicted RBP13.65□□□□□ -0.22
MSH5-213ENST00000468136 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
MSH5-213ENST00000468136 ADAMTSL3P82987 1691 aa13.65□□□□□ -0.22
MSH5-213ENST00000468136 NSD3Q9BZ95 1437 aa13.64□□□□□ -0.23
MSH5-213ENST00000468136 NEFLP07196 543 aa13.64□□□□□ -0.23
MSH5-213ENST00000468136 CEBPAP49715 358 aaPredicted RBP13.64□□□□□ -0.23
MSH5-213ENST00000468136 BCANQ96GW7 911 aa13.64□□□□□ -0.23
MSH5-213ENST00000468136 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
MSH5-213ENST00000468136 ATP7BP35670 1465 aa13.63□□□□□ -0.23
MSH5-213ENST00000468136 METP08581 1390 aa13.63□□□□□ -0.23
MSH5-213ENST00000468136 CDK19Q9BWU1 502 aa13.63□□□□□ -0.23
MSH5-213ENST00000468136 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
MSH5-213ENST00000468136 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
MSH5-213ENST00000468136 CEP170BQ9Y4F5 1589 aaPredicted RBP13.62□□□□□ -0.23
MSH5-213ENST00000468136 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
MSH5-213ENST00000468136 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
MSH5-213ENST00000468136 LTKP29376 864 aa13.61□□□□□ -0.23
MSH5-213ENST00000468136 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
MSH5-213ENST00000468136 ERICH6BQ5W0A0 696 aa13.61□□□□□ -0.23
MSH5-213ENST00000468136 MORC1Q86VD1 984 aa13.61□□□□□ -0.23
MSH5-213ENST00000468136 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
MSH5-213ENST00000468136 BLMP54132 1417 aaPredicted RBP13.61□□□□□ -0.23
MSH5-213ENST00000468136 ZNF142P52746 1687 aaPredicted RBP13.6□□□□□ -0.23
MSH5-213ENST00000468136 CNGB1Q14028 1251 aaPredicted RBP13.6□□□□□ -0.23
MSH5-213ENST00000468136 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
MSH5-213ENST00000468136 ADGRB2O60241 1585 aa13.59□□□□□ -0.23
MSH5-213ENST00000468136 SMG6Q86US8 1419 aaKnown RBP13.59□□□□□ -0.23
MSH5-213ENST00000468136 SAFB2Q14151 953 aaKnown RBP eCLIP13.59□□□□□ -0.23
MSH5-213ENST00000468136 ANKLE2Q86XL3 938 aa13.59□□□□□ -0.23
MSH5-213ENST00000468136 CFAP53Q96M91 514 aa13.59□□□□□ -0.23
MSH5-213ENST00000468136 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
MSH5-213ENST00000468136 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
MSH5-213ENST00000468136 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
MSH5-213ENST00000468136 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
MSH5-213ENST00000468136 WAPLQ7Z5K2 1190 aa13.56□□□□□ -0.24
MSH5-213ENST00000468136 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
MSH5-213ENST00000468136 NUDCQ9Y266 331 aa13.56□□□□□ -0.24
MSH5-213ENST00000468136 PLEKHH1Q9ULM0 1364 aa13.55□□□□□ -0.24
MSH5-213ENST00000468136 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
MSH5-213ENST00000468136 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
MSH5-213ENST00000468136 ROBO2Q9HCK4 1378 aa13.54□□□□□ -0.24
MSH5-213ENST00000468136 CPSF1Q10570 1443 aaKnown RBP13.54□□□□□ -0.24
MSH5-213ENST00000468136 CD163L1Q9NR16 1453 aa13.54□□□□□ -0.24
MSH5-213ENST00000468136 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
MSH5-213ENST00000468136 AMOTL2Q9Y2J4 779 aa13.53□□□□□ -0.24
MSH5-213ENST00000468136 PLEKHG3A1L390 1219 aa13.52□□□□□ -0.25
MSH5-213ENST00000468136 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.25
MSH5-213ENST00000468136 CDC42BPGQ6DT37 1551 aa13.52□□□□□ -0.25
MSH5-213ENST00000468136 ANKARQ7Z5J8 1434 aa13.51□□□□□ -0.25
MSH5-213ENST00000468136 PNNQ9H307 717 aaKnown RBP13.51□□□□□ -0.25
MSH5-213ENST00000468136 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
MSH5-213ENST00000468136 ANKRD26Q9UPS8 1709 aa13.5□□□□□ -0.25
MSH5-213ENST00000468136 PTPRUQ92729 1446 aa13.5□□□□□ -0.25
MSH5-213ENST00000468136 FYB1O15117 783 aa13.5□□□□□ -0.25
MSH5-213ENST00000468136 SLC26A8Q96RN1 970 aa13.5□□□□□ -0.25
MSH5-213ENST00000468136 XRN1Q8IZH2 1706 aaKnown RBP13.5□□□□□ -0.25
MSH5-213ENST00000468136 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
MSH5-213ENST00000468136 AATKQ6ZMQ8 1374 aa13.47□□□□□ -0.25
MSH5-213ENST00000468136 MTHFSP49914 203 aa13.47□□□□□ -0.25
MSH5-213ENST00000468136 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
MSH5-213ENST00000468136 KIF20BQ96Q89 1820 aa13.46□□□□□ -0.26
MSH5-213ENST00000468136 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
MSH5-213ENST00000468136 RNF123Q5XPI4 1314 aa13.45□□□□□ -0.26
MSH5-213ENST00000468136 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
MSH5-213ENST00000468136 FKBP8Q14318 412 aa13.45□□□□□ -0.26
MSH5-213ENST00000468136 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
MSH5-213ENST00000468136 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
MSH5-213ENST00000468136 COG3Q96JB2 828 aa13.44□□□□□ -0.26
MSH5-213ENST00000468136 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
MSH5-213ENST00000468136 ITSN1Q15811 1721 aa13.44□□□□□ -0.26
MSH5-213ENST00000468136 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
MSH5-213ENST00000468136 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
MSH5-213ENST00000468136 AKAP12Q02952 1782 aa13.43□□□□□ -0.26
MSH5-213ENST00000468136 KCNA6P17658 529 aa13.43□□□□□ -0.26
MSH5-213ENST00000468136 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
MSH5-213ENST00000468136 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
MSH5-213ENST00000468136 ZNF521Q96K83 1311 aa13.42□□□□□ -0.26
MSH5-213ENST00000468136 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms