RNA–Protein interactions for RNA: ENST00000468080.1

GPM6B-206, Transcript of glycoprotein M6B, humanhuman

TSL 4

Gene GPM6B, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-206ENST00000468080 ESCO1Q5FWF5 840 aa19.12■□□□□ 0.65
GPM6B-206ENST00000468080 NEXMIFQ5QGS0 1516 aa19.11■□□□□ 0.65
GPM6B-206ENST00000468080 RALGAPBQ86X10 1494 aa19.11■□□□□ 0.65
GPM6B-206ENST00000468080 UNC5CLQ8IV45 518 aa19.11■□□□□ 0.65
GPM6B-206ENST00000468080 LRP5O75197 1615 aa19.11■□□□□ 0.65
GPM6B-206ENST00000468080 GLI3P10071 1580 aa19.1■□□□□ 0.65
GPM6B-206ENST00000468080 BRWD3Q6RI45 1802 aa19.1■□□□□ 0.65
GPM6B-206ENST00000468080 FOXO3O43524 673 aa19.1■□□□□ 0.65
GPM6B-206ENST00000468080 PXDNQ92626 1479 aa19.09■□□□□ 0.65
GPM6B-206ENST00000468080 ROCK1Q13464 1354 aa19.09■□□□□ 0.65
GPM6B-206ENST00000468080 SPHKAPQ2M3C7 1700 aa19.09■□□□□ 0.65
GPM6B-206ENST00000468080 NPHP3Q7Z494 1330 aa19.09■□□□□ 0.65
GPM6B-206ENST00000468080 PSDA5PKW4 1024 aaPredicted RBP19.09■□□□□ 0.65
GPM6B-206ENST00000468080 SF3B2Q13435 895 aaKnown RBP19.09■□□□□ 0.65
GPM6B-206ENST00000468080 SEPT12Q8IYM1 358 aa19.07■□□□□ 0.64
GPM6B-206ENST00000468080 SLIT2O94813 1529 aa19.06■□□□□ 0.64
GPM6B-206ENST00000468080 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.06■□□□□ 0.64
GPM6B-206ENST00000468080 HRCP23327 699 aa19.05■□□□□ 0.64
GPM6B-206ENST00000468080 CLTCL1P53675 1640 aa19.04■□□□□ 0.64
GPM6B-206ENST00000468080 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
GPM6B-206ENST00000468080 HFM1A2PYH4 1435 aa19.02■□□□□ 0.64
GPM6B-206ENST00000468080 VGFO15240 615 aaPredicted RBP19.02■□□□□ 0.64
GPM6B-206ENST00000468080 ITGAEP38570 1179 aa19.02■□□□□ 0.64
GPM6B-206ENST00000468080 PRAG1Q86YV5 1406 aa19■□□□□ 0.63
GPM6B-206ENST00000468080 ONECUT3O60422 494 aaPredicted RBP19■□□□□ 0.63
GPM6B-206ENST00000468080 KRT27Q7Z3Y8 459 aa19■□□□□ 0.63
GPM6B-206ENST00000468080 SPATA31A3Q5VYP0 1347 aa19■□□□□ 0.63
GPM6B-206ENST00000468080 VPS72Q15906 364 aa18.99■□□□□ 0.63
GPM6B-206ENST00000468080 LRPPRCP42704 1394 aaKnown RBP18.98■□□□□ 0.63
GPM6B-206ENST00000468080 CDC42BPGQ6DT37 1551 aa18.98■□□□□ 0.63
GPM6B-206ENST00000468080 KIF1BO60333 1816 aa18.97■□□□□ 0.63
GPM6B-206ENST00000468080 CCDC9Q9Y3X0 531 aaKnown RBP18.97■□□□□ 0.63
GPM6B-206ENST00000468080 BAG6P46379 1132 aa18.96■□□□□ 0.63
GPM6B-206ENST00000468080 WAPLQ7Z5K2 1190 aa18.96■□□□□ 0.63
GPM6B-206ENST00000468080 CABLES1Q8TDN4 633 aa18.96■□□□□ 0.63
GPM6B-206ENST00000468080 NAIPQ13075 1403 aa18.95■□□□□ 0.62
GPM6B-206ENST00000468080 PLEKHG5O94827 1062 aa18.95■□□□□ 0.62
GPM6B-206ENST00000468080 KRT28Q7Z3Y7 464 aa18.95■□□□□ 0.62
GPM6B-206ENST00000468080 USP32Q8NFA0 1604 aa18.95■□□□□ 0.62
GPM6B-206ENST00000468080 EN1Q05925 392 aaPredicted RBP18.94■□□□□ 0.62
GPM6B-206ENST00000468080 R3HDM1Q15032 1099 aaKnown RBP18.93■□□□□ 0.62
GPM6B-206ENST00000468080 HAP1P54257 671 aaPredicted RBP18.92■□□□□ 0.62
GPM6B-206ENST00000468080 STK26Q9P289 416 aa18.92■□□□□ 0.62
GPM6B-206ENST00000468080 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
GPM6B-206ENST00000468080 A0A0G2JS52 829 aa18.9■□□□□ 0.62
GPM6B-206ENST00000468080 FAM83GA6ND36 823 aa18.9■□□□□ 0.62
GPM6B-206ENST00000468080 MYT1Q01538 1121 aa18.9■□□□□ 0.62
GPM6B-206ENST00000468080 FAM182BQ5T319 152 aa18.9■□□□□ 0.62
GPM6B-206ENST00000468080 PLCH1Q4KWH8 1693 aa18.89■□□□□ 0.61
GPM6B-206ENST00000468080 FAM98CQ17RN3 349 aaKnown RBP18.88■□□□□ 0.61
GPM6B-206ENST00000468080 PLEKHH1Q9ULM0 1364 aa18.88■□□□□ 0.61
GPM6B-206ENST00000468080 CCDC144AA2RUR9 1427 aa18.87■□□□□ 0.61
GPM6B-206ENST00000468080 NWD2Q9ULI1 1742 aa18.87■□□□□ 0.61
GPM6B-206ENST00000468080 PPLO60437 1756 aa18.86■□□□□ 0.61
GPM6B-206ENST00000468080 ADGRF5Q8IZF2 1346 aa18.85■□□□□ 0.61
GPM6B-206ENST00000468080 YY1P25490 414 aa18.85■□□□□ 0.61
GPM6B-206ENST00000468080 LMOD2Q6P5Q4 547 aa18.85■□□□□ 0.61
GPM6B-206ENST00000468080 TNS3Q68CZ2 1445 aa18.84■□□□□ 0.61
GPM6B-206ENST00000468080 FMN2Q9NZ56 1722 aa18.84■□□□□ 0.61
GPM6B-206ENST00000468080 PSME1Q06323 249 aa18.84■□□□□ 0.61
GPM6B-206ENST00000468080 EZH2Q15910 746 aaKnown RBP18.84■□□□□ 0.61
GPM6B-206ENST00000468080 TMEM132EQ6IEE7 984 aa18.84■□□□□ 0.61
GPM6B-206ENST00000468080 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
GPM6B-206ENST00000468080 TECPR2O15040 1411 aa18.83■□□□□ 0.61
GPM6B-206ENST00000468080 PHF8Q9UPP1 1060 aa18.83■□□□□ 0.6
GPM6B-206ENST00000468080 RGPD8O14715 1765 aaPredicted RBP18.82■□□□□ 0.6
GPM6B-206ENST00000468080 ABCC11Q96J66 1382 aa18.81■□□□□ 0.6
GPM6B-206ENST00000468080 RGPD1P0DJD0 1748 aa18.81■□□□□ 0.6
GPM6B-206ENST00000468080 BTG4Q9NY30 223 aa18.81■□□□□ 0.6
GPM6B-206ENST00000468080 ABCA3Q99758 1704 aa18.8■□□□□ 0.6
GPM6B-206ENST00000468080 SBNO1A3KN83 1393 aa18.8■□□□□ 0.6
GPM6B-206ENST00000468080 CAMKK2Q96RR4 588 aa18.79■□□□□ 0.6
GPM6B-206ENST00000468080 DISP2A7MBM2 1401 aa18.78■□□□□ 0.6
GPM6B-206ENST00000468080 NRAPQ86VF7 1730 aa18.77■□□□□ 0.6
GPM6B-206ENST00000468080 PPARGC1BQ86YN6 1023 aaKnown RBP18.77■□□□□ 0.6
GPM6B-206ENST00000468080 ARHGEF10O15013 1369 aa18.77■□□□□ 0.6
GPM6B-206ENST00000468080 TNS1Q9HBL0 1735 aaKnown RBP18.76■□□□□ 0.59
GPM6B-206ENST00000468080 SPATA31A5Q5VU36 1347 aa18.75■□□□□ 0.59
GPM6B-206ENST00000468080 SPATA31A7Q8IWB4 1347 aa18.75■□□□□ 0.59
GPM6B-206ENST00000468080 RRBP1Q9P2E9 1410 aaKnown RBP18.75■□□□□ 0.59
GPM6B-206ENST00000468080 RGL3Q3MIN7 710 aa18.75■□□□□ 0.59
GPM6B-206ENST00000468080 NRXN1Q9ULB1 1477 aa18.75■□□□□ 0.59
GPM6B-206ENST00000468080 TRIM37O94972 964 aa18.74■□□□□ 0.59
GPM6B-206ENST00000468080 PMFBP1Q8TBY8 1022 aa18.74■□□□□ 0.59
GPM6B-206ENST00000468080 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
GPM6B-206ENST00000468080 KNDC1Q76NI1 1749 aa18.74■□□□□ 0.59
GPM6B-206ENST00000468080 YTHDC2Q9H6S0 1430 aaKnown RBP18.74■□□□□ 0.59
GPM6B-206ENST00000468080 IFT172Q9UG01 1749 aa18.73■□□□□ 0.59
GPM6B-206ENST00000468080 APBA3O96018 575 aa18.72■□□□□ 0.59
GPM6B-206ENST00000468080 SIRT1Q96EB6 747 aa18.72■□□□□ 0.59
GPM6B-206ENST00000468080 THSD7AQ9UPZ6 1657 aa18.7■□□□□ 0.58
GPM6B-206ENST00000468080 SAFB2Q14151 953 aaKnown RBP eCLIP18.7■□□□□ 0.58
GPM6B-206ENST00000468080 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
GPM6B-206ENST00000468080 FAM196AQ6ZSG2 479 aa18.69■□□□□ 0.58
GPM6B-206ENST00000468080 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
GPM6B-206ENST00000468080 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
GPM6B-206ENST00000468080 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
GPM6B-206ENST00000468080 PRAM1Q96QH2 718 aa18.65■□□□□ 0.58
GPM6B-206ENST00000468080 PPP1R1BQ9UD71 204 aaPredicted RBP18.65■□□□□ 0.58
GPM6B-206ENST00000468080 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms