RNA–Protein interactions for RNA: ENST00000467824.1

SYN3-209, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-209ENST00000467824 PNPLA6Q8IY17 1366 aa14.29□□□□□ -0.12
SYN3-209ENST00000467824 IFT172Q9UG01 1749 aa14.29□□□□□ -0.12
SYN3-209ENST00000467824 HRCP23327 699 aa14.28□□□□□ -0.12
SYN3-209ENST00000467824 TMEM132EQ6IEE7 984 aa14.28□□□□□ -0.12
SYN3-209ENST00000467824 YTHDC2Q9H6S0 1430 aaKnown RBP14.28□□□□□ -0.12
SYN3-209ENST00000467824 C14orf93Q9H972 538 aaKnown RBP14.28□□□□□ -0.12
SYN3-209ENST00000467824 NRXN1Q9ULB1 1477 aa14.27□□□□□ -0.12
SYN3-209ENST00000467824 SOS2Q07890 1332 aaPredicted RBP14.27□□□□□ -0.12
SYN3-209ENST00000467824 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
SYN3-209ENST00000467824 WAPLQ7Z5K2 1190 aa14.27□□□□□ -0.13
SYN3-209ENST00000467824 LAMC1P11047 1609 aa14.26□□□□□ -0.13
SYN3-209ENST00000467824 DHX57Q6P158 1386 aaKnown RBP14.26□□□□□ -0.13
SYN3-209ENST00000467824 ESCO1Q5FWF5 840 aa14.26□□□□□ -0.13
SYN3-209ENST00000467824 SIRT1Q96EB6 747 aa14.26□□□□□ -0.13
SYN3-209ENST00000467824 KNDC1Q76NI1 1749 aa14.24□□□□□ -0.13
SYN3-209ENST00000467824 AFF2P51816 1311 aa14.24□□□□□ -0.13
SYN3-209ENST00000467824 CFAP70Q5T0N1 1121 aa14.24□□□□□ -0.13
SYN3-209ENST00000467824 STAC3Q96MF2 364 aa14.24□□□□□ -0.13
SYN3-209ENST00000467824 PLEKHH1Q9ULM0 1364 aa14.23□□□□□ -0.13
SYN3-209ENST00000467824 RXRBP28702 533 aa14.23□□□□□ -0.13
SYN3-209ENST00000467824 C8orf37Q96NL8 207 aa14.23□□□□□ -0.13
SYN3-209ENST00000467824 FOXO3O43524 673 aa14.21□□□□□ -0.13
SYN3-209ENST00000467824 NUTM2FA1L443 756 aa14.2□□□□□ -0.14
SYN3-209ENST00000467824 ADAMTS2O95450 1211 aa14.2□□□□□ -0.14
SYN3-209ENST00000467824 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
SYN3-209ENST00000467824 PRAM1Q96QH2 718 aa14.2□□□□□ -0.14
SYN3-209ENST00000467824 PXDNQ92626 1479 aa14.19□□□□□ -0.14
SYN3-209ENST00000467824 CDK12Q9NYV4 1490 aaPredicted RBP14.19□□□□□ -0.14
SYN3-209ENST00000467824 DCAF11Q8TEB1 546 aa14.19□□□□□ -0.14
SYN3-209ENST00000467824 POGKQ9P215 609 aa14.19□□□□□ -0.14
SYN3-209ENST00000467824 DLC1Q96QB1 1528 aa14.19□□□□□ -0.14
SYN3-209ENST00000467824 UPF1Q92900 1129 aaKnown RBP eCLIP14.18□□□□□ -0.14
SYN3-209ENST00000467824 RBM6P78332 1123 aaKnown RBP14.17□□□□□ -0.14
SYN3-209ENST00000467824 XPCQ01831 940 aaPredicted RBP14.17□□□□□ -0.14
SYN3-209ENST00000467824 QTRT2Q9H974 415 aaKnown RBP14.17□□□□□ -0.14
SYN3-209ENST00000467824 KDM2AQ9Y2K7 1162 aa14.17□□□□□ -0.14
SYN3-209ENST00000467824 COL22A1Q8NFW1 1626 aaPredicted RBP14.16□□□□□ -0.14
SYN3-209ENST00000467824 FMN2Q9NZ56 1722 aa14.16□□□□□ -0.14
SYN3-209ENST00000467824 SAFB2Q14151 953 aaKnown RBP eCLIP14.16□□□□□ -0.14
SYN3-209ENST00000467824 ADGRB1O14514 1584 aa14.16□□□□□ -0.14
SYN3-209ENST00000467824 KIF1AQ12756 1690 aa14.16□□□□□ -0.14
SYN3-209ENST00000467824 EIF3AQ14152 1382 aaKnown RBP14.15□□□□□ -0.14
SYN3-209ENST00000467824 USP21Q9UK80 565 aa14.15□□□□□ -0.14
SYN3-209ENST00000467824 PHF8Q9UPP1 1060 aa14.15□□□□□ -0.14
SYN3-209ENST00000467824 RGS12O14924 1447 aa14.15□□□□□ -0.14
SYN3-209ENST00000467824 ANKARQ7Z5J8 1434 aa14.15□□□□□ -0.14
SYN3-209ENST00000467824 PSME1Q06323 249 aa14.14□□□□□ -0.15
SYN3-209ENST00000467824 KRT28Q7Z3Y7 464 aa14.14□□□□□ -0.15
SYN3-209ENST00000467824 FNBP4Q8N3X1 1017 aaPredicted RBP14.14□□□□□ -0.15
SYN3-209ENST00000467824 TRAK1Q9UPV9 953 aa14.14□□□□□ -0.15
SYN3-209ENST00000467824 SPATA31A3Q5VYP0 1347 aa14.14□□□□□ -0.15
SYN3-209ENST00000467824 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
SYN3-209ENST00000467824 ADGRB2O60241 1585 aa14.12□□□□□ -0.15
SYN3-209ENST00000467824 TNS3Q68CZ2 1445 aa14.11□□□□□ -0.15
SYN3-209ENST00000467824 SBNO1A3KN83 1393 aa14.1□□□□□ -0.15
SYN3-209ENST00000467824 ARHGEF10O15013 1369 aa14.1□□□□□ -0.15
SYN3-209ENST00000467824 HAP1P54257 671 aaPredicted RBP14.1□□□□□ -0.15
SYN3-209ENST00000467824 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
SYN3-209ENST00000467824 HIRIP3Q9BW71 556 aaPredicted RBP14.09□□□□□ -0.15
SYN3-209ENST00000467824 ATRNO75882 1429 aa14.08□□□□□ -0.15
SYN3-209ENST00000467824 WASLO00401 505 aaPredicted RBP14.08□□□□□ -0.16
SYN3-209ENST00000467824 GPRASP1Q5JY77 1395 aa14.08□□□□□ -0.16
SYN3-209ENST00000467824 TULP4Q9NRJ4 1543 aa14.07□□□□□ -0.16
SYN3-209ENST00000467824 LMOD2Q6P5Q4 547 aa14.07□□□□□ -0.16
SYN3-209ENST00000467824 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
SYN3-209ENST00000467824 BCL9LQ86UU0 1499 aa14.06□□□□□ -0.16
SYN3-209ENST00000467824 ATAD2Q6PL18 1390 aa14.06□□□□□ -0.16
SYN3-209ENST00000467824 MARF1Q9Y4F3 1742 aaKnown RBP14.05□□□□□ -0.16
SYN3-209ENST00000467824 EP400Q96L91 3159 aa14.05□□□□□ -0.16
SYN3-209ENST00000467824 UNC5CLQ8IV45 518 aa14.04□□□□□ -0.16
SYN3-209ENST00000467824 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
SYN3-209ENST00000467824 GJD4Q96KN9 370 aaPredicted RBP14.04□□□□□ -0.16
SYN3-209ENST00000467824 PRR36Q9H6K5 1346 aa14.04□□□□□ -0.16
SYN3-209ENST00000467824 USP32Q8NFA0 1604 aa14.04□□□□□ -0.16
SYN3-209ENST00000467824 SRCAPQ6ZRS2 3230 aa14.03□□□□□ -0.16
SYN3-209ENST00000467824 SLIT2O94813 1529 aa14.03□□□□□ -0.16
SYN3-209ENST00000467824 CABLES1Q8TDN4 633 aa14.02□□□□□ -0.17
SYN3-209ENST00000467824 KIAA1210Q9ULL0 1709 aa14.01□□□□□ -0.17
SYN3-209ENST00000467824 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
SYN3-209ENST00000467824 NUDT16Q96DE0 195 aaKnown RBP14.01□□□□□ -0.17
SYN3-209ENST00000467824 RGPD8O14715 1765 aaPredicted RBP14.01□□□□□ -0.17
SYN3-209ENST00000467824 ARHGEF28Q8N1W1 1705 aaKnown RBP14.01□□□□□ -0.17
SYN3-209ENST00000467824 ATP7BP35670 1465 aa14□□□□□ -0.17
SYN3-209ENST00000467824 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.99□□□□□ -0.17
SYN3-209ENST00000467824 PAK3O75914 559 aaPredicted RBP13.99□□□□□ -0.17
SYN3-209ENST00000467824 VPS72Q15906 364 aa13.99□□□□□ -0.17
SYN3-209ENST00000467824 CDK19Q9BWU1 502 aa13.99□□□□□ -0.17
SYN3-209ENST00000467824 RALGAPBQ86X10 1494 aa13.99□□□□□ -0.17
SYN3-209ENST00000467824 NBPF1Q3BBV0 1214 aa13.98□□□□□ -0.17
SYN3-209ENST00000467824 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
SYN3-209ENST00000467824 CENPJQ9HC77 1338 aaPredicted RBP13.97□□□□□ -0.17
SYN3-209ENST00000467824 L3MBTL2Q969R5 705 aa13.97□□□□□ -0.17
SYN3-209ENST00000467824 CCDC9Q9Y3X0 531 aaKnown RBP13.97□□□□□ -0.17
SYN3-209ENST00000467824 TRPM3Q9HCF6 1732 aaPredicted RBP13.96□□□□□ -0.17
SYN3-209ENST00000467824 ITSN1Q15811 1721 aa13.95□□□□□ -0.18
SYN3-209ENST00000467824 FAM83GA6ND36 823 aa13.95□□□□□ -0.18
SYN3-209ENST00000467824 SRPK2P78362 688 aaKnown RBP13.95□□□□□ -0.18
SYN3-209ENST00000467824 CCDC125Q86Z20 511 aa13.95□□□□□ -0.18
SYN3-209ENST00000467824 ABCA3Q99758 1704 aa13.95□□□□□ -0.18
SYN3-209ENST00000467824 POLR3AO14802 1390 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms