RNA–Protein interactions for RNA: ENST00000467749.1

C4A-248, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-248ENST00000467749 ZNF326Q5BKZ1 582 aaKnown RBP12.23□□□□□ -0.45
C4A-248ENST00000467749 GLI3P10071 1580 aa12.22□□□□□ -0.45
C4A-248ENST00000467749 KIF1BO60333 1816 aa12.22□□□□□ -0.45
C4A-248ENST00000467749 NUP155O75694 1391 aa12.21□□□□□ -0.45
C4A-248ENST00000467749 ROCK1Q13464 1354 aa12.21□□□□□ -0.45
C4A-248ENST00000467749 PXDNQ92626 1479 aa12.21□□□□□ -0.46
C4A-248ENST00000467749 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
C4A-248ENST00000467749 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
C4A-248ENST00000467749 SF3B2Q13435 895 aaKnown RBP12.2□□□□□ -0.46
C4A-248ENST00000467749 DEFB132Q7Z7B7 95 aa12.2□□□□□ -0.46
C4A-248ENST00000467749 RALGAPBQ86X10 1494 aa12.2□□□□□ -0.46
C4A-248ENST00000467749 ROBO2Q9HCK4 1378 aa12.19□□□□□ -0.46
C4A-248ENST00000467749 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
C4A-248ENST00000467749 CDC42BPGQ6DT37 1551 aa12.19□□□□□ -0.46
C4A-248ENST00000467749 SLIT2O94813 1529 aa12.18□□□□□ -0.46
C4A-248ENST00000467749 PPARGC1BQ86YN6 1023 aaKnown RBP12.18□□□□□ -0.46
C4A-248ENST00000467749 HFM1A2PYH4 1435 aa12.18□□□□□ -0.46
C4A-248ENST00000467749 UNC5CLQ8IV45 518 aa12.17□□□□□ -0.46
C4A-248ENST00000467749 USP32Q8NFA0 1604 aa12.16□□□□□ -0.46
C4A-248ENST00000467749 NWD2Q9ULI1 1742 aa12.16□□□□□ -0.46
C4A-248ENST00000467749 ESCO1Q5FWF5 840 aa12.15□□□□□ -0.46
C4A-248ENST00000467749 PLCH1Q4KWH8 1693 aa12.15□□□□□ -0.46
C4A-248ENST00000467749 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
C4A-248ENST00000467749 KIF1AQ12756 1690 aa12.13□□□□□ -0.47
C4A-248ENST00000467749 PPLO60437 1756 aa12.13□□□□□ -0.47
C4A-248ENST00000467749 VGFO15240 615 aaPredicted RBP12.13□□□□□ -0.47
C4A-248ENST00000467749 FOXO3O43524 673 aa12.13□□□□□ -0.47
C4A-248ENST00000467749 HRCP23327 699 aa12.13□□□□□ -0.47
C4A-248ENST00000467749 XPCQ01831 940 aaPredicted RBP12.13□□□□□ -0.47
C4A-248ENST00000467749 SEPT12Q8IYM1 358 aa12.13□□□□□ -0.47
C4A-248ENST00000467749 RGPD1P0DJD0 1748 aa12.12□□□□□ -0.47
C4A-248ENST00000467749 PSDA5PKW4 1024 aaPredicted RBP12.12□□□□□ -0.47
C4A-248ENST00000467749 BAG6P46379 1132 aa12.11□□□□□ -0.47
C4A-248ENST00000467749 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
C4A-248ENST00000467749 ABCA3Q99758 1704 aa12.11□□□□□ -0.47
C4A-248ENST00000467749 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
C4A-248ENST00000467749 ONECUT3O60422 494 aaPredicted RBP12.1□□□□□ -0.47
C4A-248ENST00000467749 VPS72Q15906 364 aa12.1□□□□□ -0.47
C4A-248ENST00000467749 FMN2Q9NZ56 1722 aa12.1□□□□□ -0.47
C4A-248ENST00000467749 CCDC144AA2RUR9 1427 aa12.1□□□□□ -0.47
C4A-248ENST00000467749 NAIPQ13075 1403 aa12.1□□□□□ -0.47
C4A-248ENST00000467749 RPGRIP1LQ68CZ1 1315 aa12.08□□□□□ -0.48
C4A-248ENST00000467749 KNDC1Q76NI1 1749 aa12.07□□□□□ -0.48
C4A-248ENST00000467749 TNS1Q9HBL0 1735 aaKnown RBP12.07□□□□□ -0.48
C4A-248ENST00000467749 CCDC9Q9Y3X0 531 aaKnown RBP12.07□□□□□ -0.48
C4A-248ENST00000467749 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
C4A-248ENST00000467749 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
C4A-248ENST00000467749 TECPR2O15040 1411 aa12.06□□□□□ -0.48
C4A-248ENST00000467749 TNS3Q68CZ2 1445 aa12.06□□□□□ -0.48
C4A-248ENST00000467749 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
C4A-248ENST00000467749 IFT172Q9UG01 1749 aa12.06□□□□□ -0.48
C4A-248ENST00000467749 NUTM2FA1L443 756 aa12.05□□□□□ -0.48
C4A-248ENST00000467749 DISP2A7MBM2 1401 aa12.04□□□□□ -0.48
C4A-248ENST00000467749 A0A0G2JS52 829 aa12.04□□□□□ -0.48
C4A-248ENST00000467749 MYT1Q01538 1121 aa12.04□□□□□ -0.48
C4A-248ENST00000467749 R3HDM1Q15032 1099 aaKnown RBP12.04□□□□□ -0.48
C4A-248ENST00000467749 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
C4A-248ENST00000467749 ITGAEP38570 1179 aa12.03□□□□□ -0.48
C4A-248ENST00000467749 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
C4A-248ENST00000467749 ADGRB2O60241 1585 aa12.03□□□□□ -0.48
C4A-248ENST00000467749 YY1P25490 414 aa12.02□□□□□ -0.49
C4A-248ENST00000467749 PSME1Q06323 249 aa12.02□□□□□ -0.49
C4A-248ENST00000467749 CABLES1Q8TDN4 633 aa12.02□□□□□ -0.49
C4A-248ENST00000467749 ARHGEF10O15013 1369 aa12.02□□□□□ -0.49
C4A-248ENST00000467749 COL14A1Q05707 1796 aaKnown RBP12.01□□□□□ -0.49
C4A-248ENST00000467749 WAPLQ7Z5K2 1190 aa12.01□□□□□ -0.49
C4A-248ENST00000467749 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
C4A-248ENST00000467749 ABCC11Q96J66 1382 aa12.01□□□□□ -0.49
C4A-248ENST00000467749 THSD7AQ9UPZ6 1657 aa12□□□□□ -0.49
C4A-248ENST00000467749 FAM98CQ17RN3 349 aaKnown RBP12□□□□□ -0.49
C4A-248ENST00000467749 STK26Q9P289 416 aa12□□□□□ -0.49
C4A-248ENST00000467749 FAM83GA6ND36 823 aa11.99□□□□□ -0.49
C4A-248ENST00000467749 PHF8Q9UPP1 1060 aa11.99□□□□□ -0.49
C4A-248ENST00000467749 PLEKHH1Q9ULM0 1364 aa11.99□□□□□ -0.49
C4A-248ENST00000467749 RRBP1Q9P2E9 1410 aaKnown RBP11.99□□□□□ -0.49
C4A-248ENST00000467749 NRXN1Q9ULB1 1477 aa11.99□□□□□ -0.49
C4A-248ENST00000467749 RREB1Q92766 1687 aa11.98□□□□□ -0.49
C4A-248ENST00000467749 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
C4A-248ENST00000467749 TRPM3Q9HCF6 1732 aaPredicted RBP11.97□□□□□ -0.49
C4A-248ENST00000467749 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
C4A-248ENST00000467749 LMOD2Q6P5Q4 547 aa11.97□□□□□ -0.49
C4A-248ENST00000467749 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
C4A-248ENST00000467749 ALS2Q96Q42 1657 aa11.97□□□□□ -0.49
C4A-248ENST00000467749 PARD3Q8TEW0 1356 aa11.96□□□□□ -0.49
C4A-248ENST00000467749 ADGRF5Q8IZF2 1346 aa11.96□□□□□ -0.49
C4A-248ENST00000467749 FAM182BQ5T319 152 aa11.96□□□□□ -0.49
C4A-248ENST00000467749 BTG4Q9NY30 223 aa11.96□□□□□ -0.49
C4A-248ENST00000467749 YTHDC2Q9H6S0 1430 aaKnown RBP11.95□□□□□ -0.5
C4A-248ENST00000467749 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
C4A-248ENST00000467749 SPATA31A5Q5VU36 1347 aa11.95□□□□□ -0.5
C4A-248ENST00000467749 SPATA31A7Q8IWB4 1347 aa11.95□□□□□ -0.5
C4A-248ENST00000467749 CAMKK2Q96RR4 588 aa11.95□□□□□ -0.5
C4A-248ENST00000467749 ANKRD30BQ9BXX2 1392 aa11.94□□□□□ -0.5
C4A-248ENST00000467749 TMEM132EQ6IEE7 984 aa11.94□□□□□ -0.5
C4A-248ENST00000467749 SIRT1Q96EB6 747 aa11.94□□□□□ -0.5
C4A-248ENST00000467749 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
C4A-248ENST00000467749 DCAF8L1A6NGE4 600 aa11.93□□□□□ -0.5
C4A-248ENST00000467749 FAM196AQ6ZSG2 479 aa11.93□□□□□ -0.5
C4A-248ENST00000467749 TRIM37O94972 964 aa11.92□□□□□ -0.5
C4A-248ENST00000467749 ANKARQ7Z5J8 1434 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms