RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 NCOA3Q9Y6Q9 1424 aa24.1■■□□□ 1.45
VARS2-204ENST00000467717 CENPJQ9HC77 1338 aaPredicted RBP24.1■■□□□ 1.45
VARS2-204ENST00000467717 SAFB2Q14151 953 aaKnown RBP eCLIP24.09■■□□□ 1.45
VARS2-204ENST00000467717 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
VARS2-204ENST00000467717 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.45
VARS2-204ENST00000467717 C14orf37Q86TY3 774 aa24.08■■□□□ 1.45
VARS2-204ENST00000467717 KNDC1Q76NI1 1749 aa24.07■■□□□ 1.44
VARS2-204ENST00000467717 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
VARS2-204ENST00000467717 ST20-MTHFSA0A0A6YYL1 179 aa24.05■■□□□ 1.44
VARS2-204ENST00000467717 C19orf44Q9H6X5 657 aa24.05■■□□□ 1.44
VARS2-204ENST00000467717 PIP4K2BP78356 416 aa24.04■■□□□ 1.44
VARS2-204ENST00000467717 ADGRL3Q9HAR2 1447 aa24.02■■□□□ 1.44
VARS2-204ENST00000467717 PHF23Q9BUL5 403 aaPredicted RBP24.02■■□□□ 1.44
VARS2-204ENST00000467717 MINK1Q8N4C8 1332 aaPredicted RBP24.02■■□□□ 1.44
VARS2-204ENST00000467717 MSH6P52701 1360 aa24.01■■□□□ 1.43
VARS2-204ENST00000467717 TOM1O60784 492 aa24■■□□□ 1.43
VARS2-204ENST00000467717 HSPA5P11021 654 aaKnown RBP24■■□□□ 1.43
VARS2-204ENST00000467717 ARHGEF28Q8N1W1 1705 aaKnown RBP23.99■■□□□ 1.43
VARS2-204ENST00000467717 SLC24A1O60721 1099 aa23.99■■□□□ 1.43
VARS2-204ENST00000467717 HIRIP3Q9BW71 556 aaPredicted RBP23.99■■□□□ 1.43
VARS2-204ENST00000467717 SBNO2Q9Y2G9 1366 aa23.99■■□□□ 1.43
VARS2-204ENST00000467717 TESK2Q96S53 571 aa23.98■■□□□ 1.43
VARS2-204ENST00000467717 ATF3P18847 181 aa23.97■■□□□ 1.43
VARS2-204ENST00000467717 CADPS2Q86UW7 1296 aa23.96■■□□□ 1.43
VARS2-204ENST00000467717 DCCP43146 1447 aa23.95■■□□□ 1.42
VARS2-204ENST00000467717 WASLO00401 505 aaPredicted RBP23.95■■□□□ 1.42
VARS2-204ENST00000467717 EVC2Q86UK5 1308 aa23.93■■□□□ 1.42
VARS2-204ENST00000467717 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.93■■□□□ 1.42
VARS2-204ENST00000467717 CDK19Q9BWU1 502 aa23.91■■□□□ 1.42
VARS2-204ENST00000467717 TMF1P82094 1093 aa23.9■■□□□ 1.42
VARS2-204ENST00000467717 ADGRB2O60241 1585 aa23.9■■□□□ 1.42
VARS2-204ENST00000467717 CDC42BPGQ6DT37 1551 aa23.89■■□□□ 1.41
VARS2-204ENST00000467717 SRPK2P78362 688 aaKnown RBP23.88■■□□□ 1.41
VARS2-204ENST00000467717 NALCNQ8IZF0 1738 aa23.87■■□□□ 1.41
VARS2-204ENST00000467717 QRICH2Q9H0J4 1663 aa23.87■■□□□ 1.41
VARS2-204ENST00000467717 XIRP1Q702N8 1843 aaKnown RBP23.87■■□□□ 1.41
VARS2-204ENST00000467717 NUTM2FA1L443 756 aa23.86■■□□□ 1.41
VARS2-204ENST00000467717 CABP2Q9NPB3 220 aa23.86■■□□□ 1.41
VARS2-204ENST00000467717 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
VARS2-204ENST00000467717 CDCA8Q53HL2 280 aa23.85■■□□□ 1.41
VARS2-204ENST00000467717 PUS7Q96PZ0 661 aaKnown RBP23.85■■□□□ 1.41
VARS2-204ENST00000467717 TULP4Q9NRJ4 1543 aa23.84■■□□□ 1.41
VARS2-204ENST00000467717 MST1RQ04912 1400 aa23.84■■□□□ 1.41
VARS2-204ENST00000467717 ANKARQ7Z5J8 1434 aa23.84■■□□□ 1.41
VARS2-204ENST00000467717 NUDT16Q96DE0 195 aaKnown RBP23.83■■□□□ 1.41
VARS2-204ENST00000467717 PRR36Q9H6K5 1346 aa23.82■■□□□ 1.4
VARS2-204ENST00000467717 CCDC61Q9Y6R9 512 aa23.81■■□□□ 1.4
VARS2-204ENST00000467717 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
VARS2-204ENST00000467717 ATAD2Q6PL18 1390 aa23.79■■□□□ 1.4
VARS2-204ENST00000467717 ESCO1Q5FWF5 840 aa23.79■■□□□ 1.4
VARS2-204ENST00000467717 ATP7BP35670 1465 aa23.77■■□□□ 1.4
VARS2-204ENST00000467717 C11orf95C9JLR9 678 aaPredicted RBP23.77■■□□□ 1.4
VARS2-204ENST00000467717 ORAI2Q96SN7 254 aa23.77■■□□□ 1.4
VARS2-204ENST00000467717 FMN2Q9NZ56 1722 aa23.76■■□□□ 1.39
VARS2-204ENST00000467717 BRINP3Q76B58 766 aa23.75■■□□□ 1.39
VARS2-204ENST00000467717 PHF8Q9UPP1 1060 aa23.74■■□□□ 1.39
VARS2-204ENST00000467717 POLR3GLQ9BT43 218 aa23.73■■□□□ 1.39
VARS2-204ENST00000467717 CABP1Q9NZU7 370 aa23.73■■□□□ 1.39
VARS2-204ENST00000467717 PLEKHG3A1L390 1219 aa23.72■■□□□ 1.39
VARS2-204ENST00000467717 TMC1Q8TDI8 760 aa23.72■■□□□ 1.39
VARS2-204ENST00000467717 KIF7Q2M1P5 1343 aa23.72■■□□□ 1.39
VARS2-204ENST00000467717 PPIP5K1Q6PFW1 1433 aa23.71■■□□□ 1.39
VARS2-204ENST00000467717 PMFBP1Q8TBY8 1022 aa23.71■■□□□ 1.39
VARS2-204ENST00000467717 NINLQ9Y2I6 1382 aa23.7■■□□□ 1.38
VARS2-204ENST00000467717 WASHC2AQ641Q2 1341 aa23.69■■□□□ 1.38
VARS2-204ENST00000467717 NGDNQ8NEJ9 315 aaKnown RBP23.69■■□□□ 1.38
VARS2-204ENST00000467717 RGS17Q9UGC6 210 aaPredicted RBP23.69■■□□□ 1.38
VARS2-204ENST00000467717 USP32Q8NFA0 1604 aa23.69■■□□□ 1.38
VARS2-204ENST00000467717 CCDC7Q96M83 1385 aa23.68■■□□□ 1.38
VARS2-204ENST00000467717 SLC12A5Q9H2X9 1139 aa23.68■■□□□ 1.38
VARS2-204ENST00000467717 FOXO3O43524 673 aa23.67■■□□□ 1.38
VARS2-204ENST00000467717 ACEP12821 1306 aa23.65■■□□□ 1.38
VARS2-204ENST00000467717 NPHP3Q7Z494 1330 aa23.65■■□□□ 1.38
VARS2-204ENST00000467717 POLR3AO14802 1390 aaPredicted RBP23.65■■□□□ 1.38
VARS2-204ENST00000467717 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.37
VARS2-204ENST00000467717 TERF2IPQ9NYB0 399 aa23.64■■□□□ 1.37
VARS2-204ENST00000467717 PSME1Q06323 249 aa23.63■■□□□ 1.37
VARS2-204ENST00000467717 ZNF692Q9BU19 519 aaPredicted RBP23.63■■□□□ 1.37
VARS2-204ENST00000467717 HDGFL2Q7Z4V5 671 aaPredicted RBP23.62■■□□□ 1.37
VARS2-204ENST00000467717 DDX17Q92841 729 aaKnown RBP23.62■■□□□ 1.37
VARS2-204ENST00000467717 TOPAZ1Q8N9V7 1692 aa23.6■■□□□ 1.37
VARS2-204ENST00000467717 CPSF1Q10570 1443 aaKnown RBP23.59■■□□□ 1.37
VARS2-204ENST00000467717 KRT28Q7Z3Y7 464 aa23.59■■□□□ 1.37
VARS2-204ENST00000467717 ANKRD36BQ8N2N9 1353 aa23.59■■□□□ 1.37
VARS2-204ENST00000467717 ROBO1Q9Y6N7 1651 aa23.59■■□□□ 1.37
VARS2-204ENST00000467717 SOS2Q07890 1332 aaPredicted RBP23.59■■□□□ 1.37
VARS2-204ENST00000467717 KIF1AQ12756 1690 aa23.58■■□□□ 1.37
VARS2-204ENST00000467717 XPCQ01831 940 aaPredicted RBP23.58■■□□□ 1.37
VARS2-204ENST00000467717 ITSN1Q15811 1721 aa23.58■■□□□ 1.37
VARS2-204ENST00000467717 CD163L1Q9NR16 1453 aa23.57■■□□□ 1.36
VARS2-204ENST00000467717 A0A1W2PP64 1363 aa23.57■■□□□ 1.36
VARS2-204ENST00000467717 KTN1Q86UP2 1357 aaKnown RBP23.56■■□□□ 1.36
VARS2-204ENST00000467717 RGPD8O14715 1765 aaPredicted RBP23.56■■□□□ 1.36
VARS2-204ENST00000467717 PANK3Q9H999 370 aa23.56■■□□□ 1.36
VARS2-204ENST00000467717 BRD4O60885 1362 aaPredicted RBP23.54■■□□□ 1.36
VARS2-204ENST00000467717 USP6P35125 1406 aa23.54■■□□□ 1.36
VARS2-204ENST00000467717 AHDC1Q5TGY3 1603 aaPredicted RBP23.54■■□□□ 1.36
VARS2-204ENST00000467717 POTEAQ6S8J7 498 aa23.53■■□□□ 1.36
VARS2-204ENST00000467717 PXDNQ92626 1479 aa23.52■■□□□ 1.36
VARS2-204ENST00000467717 LRRC59Q96AG4 307 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms