RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 PPP4CP60510 307 aa9.81□□□□□ -0.84
GAPVD1-211ENST00000467707 PROSER2Q86WR7 435 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-211ENST00000467707 WWC1Q8IX03 1113 aa9.81□□□□□ -0.84
GAPVD1-211ENST00000467707 SNRKQ9NRH2 765 aa9.81□□□□□ -0.84
GAPVD1-211ENST00000467707 TSR3Q9UJK0 312 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-211ENST00000467707 C6orf229H3BNL8 230 aa9.8□□□□□ -0.84
GAPVD1-211ENST00000467707 MTMR14Q8NCE2 650 aa9.8□□□□□ -0.84
GAPVD1-211ENST00000467707 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
GAPVD1-211ENST00000467707 GUCA2AQ02747 115 aa9.79□□□□□ -0.84
GAPVD1-211ENST00000467707 MORN1Q5T089 497 aa9.79□□□□□ -0.84
GAPVD1-211ENST00000467707 WNT2BQ93097 391 aa9.79□□□□□ -0.84
GAPVD1-211ENST00000467707 HLA-CQ95604 372 aa9.79□□□□□ -0.84
GAPVD1-211ENST00000467707 HPS5Q9UPZ3 1129 aa9.78□□□□□ -0.84
GAPVD1-211ENST00000467707 COG6Q9Y2V7 657 aa9.78□□□□□ -0.84
GAPVD1-211ENST00000467707 SALL2Q9Y467 1007 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-211ENST00000467707 RETREG3Q86VR2 466 aa9.77□□□□□ -0.85
GAPVD1-211ENST00000467707 FNBP4Q8N3X1 1017 aaPredicted RBP9.77□□□□□ -0.85
GAPVD1-211ENST00000467707 DESI1Q6ICB0 168 aa9.76□□□□□ -0.85
GAPVD1-211ENST00000467707 NYAP1Q6ZVC0 841 aa9.75□□□□□ -0.85
GAPVD1-211ENST00000467707 POM121Q96HA1 1249 aa9.75□□□□□ -0.85
GAPVD1-211ENST00000467707 SLC27A5Q9Y2P5 690 aa9.75□□□□□ -0.85
GAPVD1-211ENST00000467707 NR1I2O75469 434 aa9.74□□□□□ -0.85
GAPVD1-211ENST00000467707 BCAMP50895 628 aa9.74□□□□□ -0.85
GAPVD1-211ENST00000467707 CFAP99D6REC4 459 aa9.73□□□□□ -0.85
GAPVD1-211ENST00000467707 HOMEZQ8IX15 550 aa9.73□□□□□ -0.85
GAPVD1-211ENST00000467707 PRR7Q8TB68 274 aa9.73□□□□□ -0.85
GAPVD1-211ENST00000467707 PCDHB3Q9Y5E6 796 aa9.73□□□□□ -0.85
GAPVD1-211ENST00000467707 NDUFB9Q9Y6M9 179 aa9.73□□□□□ -0.85
GAPVD1-211ENST00000467707 APLP1P51693 650 aa9.72□□□□□ -0.85
GAPVD1-211ENST00000467707 CTDSPL2Q05D32 466 aa9.72□□□□□ -0.85
GAPVD1-211ENST00000467707 PUS10Q3MIT2 529 aaKnown RBP9.72□□□□□ -0.85
GAPVD1-211ENST00000467707 TSC1Q92574 1164 aa9.72□□□□□ -0.85
GAPVD1-211ENST00000467707 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
GAPVD1-211ENST00000467707 KRTAP3-2Q9BYR7 98 aa9.72□□□□□ -0.85
GAPVD1-211ENST00000467707 GDPD2Q9HCC8 539 aa9.72□□□□□ -0.85
GAPVD1-211ENST00000467707 FMNL1O95466 1100 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-211ENST00000467707 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
GAPVD1-211ENST00000467707 GJD4Q96KN9 370 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-211ENST00000467707 USB1Q9BQ65 265 aaKnown RBP9.7□□□□□ -0.86
GAPVD1-211ENST00000467707 ZNF330Q9Y3S2 320 aaPredicted RBP9.7□□□□□ -0.86
GAPVD1-211ENST00000467707 BRICD5Q6PL45 260 aa9.69□□□□□ -0.86
GAPVD1-211ENST00000467707 SCUBE3Q8IX30 993 aa9.69□□□□□ -0.86
GAPVD1-211ENST00000467707 PNMA1Q8ND90 353 aa9.69□□□□□ -0.86
GAPVD1-211ENST00000467707 C1orf115Q9H7X2 142 aa9.69□□□□□ -0.86
GAPVD1-211ENST00000467707 ARID3CA6NKF2 412 aa9.68□□□□□ -0.86
GAPVD1-211ENST00000467707 SYMPKQ92797 1274 aaKnown RBP9.68□□□□□ -0.86
GAPVD1-211ENST00000467707 WBP1LQ9NX94 342 aa9.68□□□□□ -0.86
GAPVD1-211ENST00000467707 TBC1D2BQ9UPU7 963 aa9.68□□□□□ -0.86
GAPVD1-211ENST00000467707 ABL2P42684 1182 aa9.67□□□□□ -0.86
GAPVD1-211ENST00000467707 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
GAPVD1-211ENST00000467707 BLOC1S3Q6QNY0 202 aa9.66□□□□□ -0.86
GAPVD1-211ENST00000467707 LYPD8Q6UX82 237 aa9.66□□□□□ -0.86
GAPVD1-211ENST00000467707 RNF19BQ6ZMZ0 732 aa9.66□□□□□ -0.86
GAPVD1-211ENST00000467707 THAP11Q96EK4 314 aa9.66□□□□□ -0.86
GAPVD1-211ENST00000467707 TRIM34Q9BYJ4 488 aa9.66□□□□□ -0.86
GAPVD1-211ENST00000467707 HMX1Q9NP08 348 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-211ENST00000467707 SERPINA10Q9UK55 444 aa9.66□□□□□ -0.86
GAPVD1-211ENST00000467707 ZNF777Q9ULD5 760 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-211ENST00000467707 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
GAPVD1-211ENST00000467707 MSS51Q4VC12 460 aa9.64□□□□□ -0.87
GAPVD1-211ENST00000467707 KCTD12Q96CX2 325 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-211ENST00000467707 CCDC97Q96F63 343 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-211ENST00000467707 PLSCR2Q9NRY7 297 aa9.63□□□□□ -0.87
GAPVD1-211ENST00000467707 JUNDP17535 347 aa9.62□□□□□ -0.87
GAPVD1-211ENST00000467707 PTPRNQ16849 979 aa9.62□□□□□ -0.87
GAPVD1-211ENST00000467707 CDAN1Q8IWY9 1227 aa9.62□□□□□ -0.87
GAPVD1-211ENST00000467707 CCDC82Q8N4S0 544 aa9.62□□□□□ -0.87
GAPVD1-211ENST00000467707 PER1O15534 1290 aaPredicted RBP9.61□□□□□ -0.87
GAPVD1-211ENST00000467707 POTEGQ6S5H5 508 aa9.61□□□□□ -0.87
GAPVD1-211ENST00000467707 SPSB2Q99619 263 aa9.61□□□□□ -0.87
GAPVD1-211ENST00000467707 IRF5Q13568 498 aa9.6□□□□□ -0.87
GAPVD1-211ENST00000467707 ARID3AQ99856 593 aa9.6□□□□□ -0.87
GAPVD1-211ENST00000467707 ZC3H4Q9UPT8 1303 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-211ENST00000467707 POTEMA6NI47 508 aa9.58□□□□□ -0.88
GAPVD1-211ENST00000467707 GPR37L1O60883 481 aa9.58□□□□□ -0.88
GAPVD1-211ENST00000467707 SOX11P35716 441 aa9.58□□□□□ -0.88
GAPVD1-211ENST00000467707 COPS2P61201 443 aa9.58□□□□□ -0.88
GAPVD1-211ENST00000467707 NR6A1Q15406 480 aa9.58□□□□□ -0.88
GAPVD1-211ENST00000467707 CALR3Q96L12 384 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-211ENST00000467707 ZPR1O75312 459 aa9.57□□□□□ -0.88
GAPVD1-211ENST00000467707 DXOO77932 396 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-211ENST00000467707 ADH1BP00325 375 aa9.57□□□□□ -0.88
GAPVD1-211ENST00000467707 MMP16P51512 607 aa9.57□□□□□ -0.88
GAPVD1-211ENST00000467707 F12P00748 615 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-211ENST00000467707 CCNYL3P0C7X3 344 aa9.56□□□□□ -0.88
GAPVD1-211ENST00000467707 ARMC2Q8NEN0 867 aa9.56□□□□□ -0.88
GAPVD1-211ENST00000467707 EPS8L1Q8TE68 723 aa9.56□□□□□ -0.88
GAPVD1-211ENST00000467707 GLMNQ92990 594 aa9.56□□□□□ -0.88
GAPVD1-211ENST00000467707 IL21Q9HBE4 155 aa9.56□□□□□ -0.88
GAPVD1-211ENST00000467707 MTRQ99707 1265 aa9.55□□□□□ -0.88
GAPVD1-211ENST00000467707 PTPN5P54829 565 aa9.54□□□□□ -0.88
GAPVD1-211ENST00000467707 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-211ENST00000467707 GPKOWQ92917 476 aaPredicted RBP eCLIP9.54□□□□□ -0.88
GAPVD1-211ENST00000467707 EVA1BQ9NVM1 165 aa9.54□□□□□ -0.88
GAPVD1-211ENST00000467707 FKBPLQ9UIM3 349 aa9.54□□□□□ -0.88
GAPVD1-211ENST00000467707 MYT1LQ9UL68 1186 aa9.54□□□□□ -0.88
GAPVD1-211ENST00000467707 POM121CA8CG34 1229 aa9.53□□□□□ -0.88
GAPVD1-211ENST00000467707 ZNF592Q92610 1267 aa9.53□□□□□ -0.88
GAPVD1-211ENST00000467707 NUDT12Q9BQG2 462 aa9.53□□□□□ -0.88
GAPVD1-211ENST00000467707 PCDH10Q9P2E7 1040 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms