RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 NHSL1Q5SYE7 1610 aa17.46■□□□□ 0.39
CTNS-205ENST00000467663 CFAP70Q5T0N1 1121 aa17.45■□□□□ 0.38
CTNS-205ENST00000467663 WAPLQ7Z5K2 1190 aa17.45■□□□□ 0.38
CTNS-205ENST00000467663 LRRC59Q96AG4 307 aaKnown RBP17.45■□□□□ 0.38
CTNS-205ENST00000467663 SHPRHQ149N8 1683 aa17.45■□□□□ 0.38
CTNS-205ENST00000467663 DDX17Q92841 729 aaKnown RBP17.44■□□□□ 0.38
CTNS-205ENST00000467663 ORAI2Q96SN7 254 aa17.44■□□□□ 0.38
CTNS-205ENST00000467663 CDC42BPGQ6DT37 1551 aa17.44■□□□□ 0.38
CTNS-205ENST00000467663 KNDC1Q76NI1 1749 aa17.44■□□□□ 0.38
CTNS-205ENST00000467663 LRP6O75581 1613 aa17.43■□□□□ 0.38
CTNS-205ENST00000467663 STAC3Q96MF2 364 aa17.43■□□□□ 0.38
CTNS-205ENST00000467663 PLEKHH1Q9ULM0 1364 aa17.42■□□□□ 0.38
CTNS-205ENST00000467663 POTEAQ6S8J7 498 aa17.42■□□□□ 0.38
CTNS-205ENST00000467663 LAMC1P11047 1609 aa17.42■□□□□ 0.38
CTNS-205ENST00000467663 SOS2Q07890 1332 aaPredicted RBP17.41■□□□□ 0.38
CTNS-205ENST00000467663 DCAF11Q8TEB1 546 aa17.4■□□□□ 0.38
CTNS-205ENST00000467663 TIMELESSQ9UNS1 1208 aa17.4■□□□□ 0.38
CTNS-205ENST00000467663 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
CTNS-205ENST00000467663 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
CTNS-205ENST00000467663 MEX3CQ5U5Q3 659 aaKnown RBP17.38■□□□□ 0.37
CTNS-205ENST00000467663 KDM2AQ9Y2K7 1162 aa17.38■□□□□ 0.37
CTNS-205ENST00000467663 ADGRB1O14514 1584 aa17.36■□□□□ 0.37
CTNS-205ENST00000467663 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
CTNS-205ENST00000467663 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
CTNS-205ENST00000467663 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
CTNS-205ENST00000467663 DLC1Q96QB1 1528 aa17.36■□□□□ 0.37
CTNS-205ENST00000467663 ZNF772Q68DY9 489 aaPredicted RBP17.35■□□□□ 0.37
CTNS-205ENST00000467663 PRAM1Q96QH2 718 aa17.35■□□□□ 0.37
CTNS-205ENST00000467663 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
CTNS-205ENST00000467663 NUTM2FA1L443 756 aa17.34■□□□□ 0.37
CTNS-205ENST00000467663 FMN2Q9NZ56 1722 aa17.33■□□□□ 0.36
CTNS-205ENST00000467663 FOXO3O43524 673 aa17.32■□□□□ 0.36
CTNS-205ENST00000467663 POGKQ9P215 609 aa17.32■□□□□ 0.36
CTNS-205ENST00000467663 PXDNQ92626 1479 aa17.31■□□□□ 0.36
CTNS-205ENST00000467663 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
CTNS-205ENST00000467663 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
CTNS-205ENST00000467663 AFF2P51816 1311 aa17.28■□□□□ 0.36
CTNS-205ENST00000467663 XPCQ01831 940 aaPredicted RBP17.27■□□□□ 0.36
CTNS-205ENST00000467663 COL22A1Q8NFW1 1626 aaPredicted RBP17.27■□□□□ 0.36
CTNS-205ENST00000467663 ADGRB2O60241 1585 aa17.27■□□□□ 0.35
CTNS-205ENST00000467663 KIF1AQ12756 1690 aa17.26■□□□□ 0.35
CTNS-205ENST00000467663 C8orf37Q96NL8 207 aa17.26■□□□□ 0.35
CTNS-205ENST00000467663 PHF8Q9UPP1 1060 aa17.26■□□□□ 0.35
CTNS-205ENST00000467663 ANKARQ7Z5J8 1434 aa17.26■□□□□ 0.35
CTNS-205ENST00000467663 ADAMTS2O95450 1211 aa17.25■□□□□ 0.35
CTNS-205ENST00000467663 RXRBP28702 533 aa17.24■□□□□ 0.35
CTNS-205ENST00000467663 KRT28Q7Z3Y7 464 aa17.24■□□□□ 0.35
CTNS-205ENST00000467663 SPATA31A3Q5VYP0 1347 aa17.23■□□□□ 0.35
CTNS-205ENST00000467663 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
CTNS-205ENST00000467663 NGLY1Q96IV0 654 aa17.23■□□□□ 0.35
CTNS-205ENST00000467663 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
CTNS-205ENST00000467663 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
CTNS-205ENST00000467663 EIF3AQ14152 1382 aaKnown RBP17.22■□□□□ 0.35
CTNS-205ENST00000467663 USP32Q8NFA0 1604 aa17.21■□□□□ 0.35
CTNS-205ENST00000467663 KIAA1210Q9ULL0 1709 aa17.21■□□□□ 0.35
CTNS-205ENST00000467663 TONSLQ96HA7 1378 aa17.21■□□□□ 0.35
CTNS-205ENST00000467663 PSME1Q06323 249 aa17.21■□□□□ 0.35
CTNS-205ENST00000467663 FNBP4Q8N3X1 1017 aaPredicted RBP17.21■□□□□ 0.35
CTNS-205ENST00000467663 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
CTNS-205ENST00000467663 CDK12Q9NYV4 1490 aaPredicted RBP17.2■□□□□ 0.34
CTNS-205ENST00000467663 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
CTNS-205ENST00000467663 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
CTNS-205ENST00000467663 SBNO1A3KN83 1393 aa17.19■□□□□ 0.34
CTNS-205ENST00000467663 NBPF1Q3BBV0 1214 aa17.19■□□□□ 0.34
CTNS-205ENST00000467663 L3MBTL2Q969R5 705 aa17.19■□□□□ 0.34
CTNS-205ENST00000467663 SIN3AQ96ST3 1273 aa17.19■□□□□ 0.34
CTNS-205ENST00000467663 TULP4Q9NRJ4 1543 aa17.19■□□□□ 0.34
CTNS-205ENST00000467663 ARHGEF28Q8N1W1 1705 aaKnown RBP17.18■□□□□ 0.34
CTNS-205ENST00000467663 RBM6P78332 1123 aaKnown RBP17.18■□□□□ 0.34
CTNS-205ENST00000467663 NEUROD1Q13562 356 aa17.18■□□□□ 0.34
CTNS-205ENST00000467663 PMFBP1Q8TBY8 1022 aa17.18■□□□□ 0.34
CTNS-205ENST00000467663 TNS3Q68CZ2 1445 aa17.18■□□□□ 0.34
CTNS-205ENST00000467663 USP21Q9UK80 565 aa17.17■□□□□ 0.34
CTNS-205ENST00000467663 TRPC5Q9UL62 973 aaPredicted RBP17.15■□□□□ 0.34
CTNS-205ENST00000467663 ARHGEF10O15013 1369 aa17.14■□□□□ 0.33
CTNS-205ENST00000467663 BCL9LQ86UU0 1499 aa17.13■□□□□ 0.33
CTNS-205ENST00000467663 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
CTNS-205ENST00000467663 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
CTNS-205ENST00000467663 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
CTNS-205ENST00000467663 ATRNO75882 1429 aa17.13■□□□□ 0.33
CTNS-205ENST00000467663 ATP7BP35670 1465 aa17.12■□□□□ 0.33
CTNS-205ENST00000467663 RGS12O14924 1447 aa17.12■□□□□ 0.33
CTNS-205ENST00000467663 MARF1Q9Y4F3 1742 aaKnown RBP17.11■□□□□ 0.33
CTNS-205ENST00000467663 CABLES1Q8TDN4 633 aa17.11■□□□□ 0.33
CTNS-205ENST00000467663 LMOD2Q6P5Q4 547 aa17.1■□□□□ 0.33
CTNS-205ENST00000467663 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
CTNS-205ENST00000467663 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
CTNS-205ENST00000467663 SLIT2O94813 1529 aa17.1■□□□□ 0.33
CTNS-205ENST00000467663 TRPM3Q9HCF6 1732 aaPredicted RBP17.1■□□□□ 0.33
CTNS-205ENST00000467663 HAP1P54257 671 aaPredicted RBP17.09■□□□□ 0.33
CTNS-205ENST00000467663 UPF1Q92900 1129 aaKnown RBP eCLIP17.09■□□□□ 0.33
CTNS-205ENST00000467663 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
CTNS-205ENST00000467663 UNC5CLQ8IV45 518 aa17.08■□□□□ 0.32
CTNS-205ENST00000467663 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
CTNS-205ENST00000467663 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
CTNS-205ENST00000467663 GJD4Q96KN9 370 aaPredicted RBP17.06■□□□□ 0.32
CTNS-205ENST00000467663 ITSN1Q15811 1721 aa17.06■□□□□ 0.32
CTNS-205ENST00000467663 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
CTNS-205ENST00000467663 TRPM1Q7Z4N2 1603 aa17.06■□□□□ 0.32
CTNS-205ENST00000467663 ABCA3Q99758 1704 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms