RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 CDCA7LQ96GN5 454 aa23.3■■□□□ 1.32
NELFA-213ENST00000467661 CCDC136Q96JN2 1154 aa23.3■■□□□ 1.32
NELFA-213ENST00000467661 POLR3AO14802 1390 aaPredicted RBP23.3■■□□□ 1.32
NELFA-213ENST00000467661 NINLQ9Y2I6 1382 aa23.29■■□□□ 1.32
NELFA-213ENST00000467661 SLC12A5Q9H2X9 1139 aa23.28■■□□□ 1.32
NELFA-213ENST00000467661 PTPRMP28827 1452 aa23.28■■□□□ 1.32
NELFA-213ENST00000467661 NSD2O96028 1365 aa23.27■■□□□ 1.32
NELFA-213ENST00000467661 ANKRD36BQ8N2N9 1353 aa23.27■■□□□ 1.32
NELFA-213ENST00000467661 FBXO31Q5XUX0 539 aaPredicted RBP23.27■■□□□ 1.32
NELFA-213ENST00000467661 MORC1Q86VD1 984 aa23.27■■□□□ 1.32
NELFA-213ENST00000467661 NGEFQ8N5V2 710 aa23.27■■□□□ 1.32
NELFA-213ENST00000467661 CGNL1Q0VF96 1302 aa23.26■■□□□ 1.31
NELFA-213ENST00000467661 STAG3Q9UJ98 1225 aa23.26■■□□□ 1.31
NELFA-213ENST00000467661 ALKQ9UM73 1620 aa23.25■■□□□ 1.31
NELFA-213ENST00000467661 PLEKHH1Q9ULM0 1364 aa23.25■■□□□ 1.31
NELFA-213ENST00000467661 ZNF521Q96K83 1311 aa23.24■■□□□ 1.31
NELFA-213ENST00000467661 YTHDC2Q9H6S0 1430 aaKnown RBP23.24■■□□□ 1.31
NELFA-213ENST00000467661 CEBPAP49715 358 aaPredicted RBP23.24■■□□□ 1.31
NELFA-213ENST00000467661 GOLGA2Q08379 1002 aa23.22■■□□□ 1.31
NELFA-213ENST00000467661 ATAD2Q6PL18 1390 aa23.21■■□□□ 1.31
NELFA-213ENST00000467661 A2ML1A8K2U0 1454 aa23.21■■□□□ 1.31
NELFA-213ENST00000467661 SETD1BQ9UPS6 1966 aaKnown RBP23.2■■□□□ 1.31
NELFA-213ENST00000467661 SHPRHQ149N8 1683 aa23.2■■□□□ 1.3
NELFA-213ENST00000467661 STK26Q9P289 416 aa23.19■■□□□ 1.3
NELFA-213ENST00000467661 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
NELFA-213ENST00000467661 CABP2Q9NPB3 220 aa23.17■■□□□ 1.3
NELFA-213ENST00000467661 POGKQ9P215 609 aa23.17■■□□□ 1.3
NELFA-213ENST00000467661 DLC1Q96QB1 1528 aa23.17■■□□□ 1.3
NELFA-213ENST00000467661 DUSP27Q5VZP5 1158 aa23.16■■□□□ 1.3
NELFA-213ENST00000467661 CCDC146Q8IYE0 955 aa23.16■■□□□ 1.3
NELFA-213ENST00000467661 RIMS2Q9UQ26 1411 aa23.16■■□□□ 1.3
NELFA-213ENST00000467661 SRPK2P78362 688 aaKnown RBP23.16■■□□□ 1.3
NELFA-213ENST00000467661 EXOC6Q8TAG9 804 aa23.16■■□□□ 1.3
NELFA-213ENST00000467661 CFAP53Q96M91 514 aa23.16■■□□□ 1.3
NELFA-213ENST00000467661 SAFB2Q14151 953 aaKnown RBP eCLIP23.15■■□□□ 1.3
NELFA-213ENST00000467661 PRAM1Q96QH2 718 aa23.15■■□□□ 1.3
NELFA-213ENST00000467661 APAF1O14727 1248 aa23.14■■□□□ 1.3
NELFA-213ENST00000467661 SLFN5Q08AF3 891 aa23.14■■□□□ 1.3
NELFA-213ENST00000467661 SETD1AO15047 1707 aaKnown RBP23.14■■□□□ 1.29
NELFA-213ENST00000467661 ABCC11Q96J66 1382 aa23.13■■□□□ 1.29
NELFA-213ENST00000467661 ANKRD26Q9UPS8 1709 aa23.13■■□□□ 1.29
NELFA-213ENST00000467661 TERF2IPQ9NYB0 399 aa23.12■■□□□ 1.29
NELFA-213ENST00000467661 A0A1W2PP64 1363 aa23.12■■□□□ 1.29
NELFA-213ENST00000467661 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
NELFA-213ENST00000467661 TRMT2AQ8IZ69 625 aaKnown RBP23.11■■□□□ 1.29
NELFA-213ENST00000467661 E9PSI1 815 aa23.11■■□□□ 1.29
NELFA-213ENST00000467661 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.11■■□□□ 1.29
NELFA-213ENST00000467661 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.11■■□□□ 1.29
NELFA-213ENST00000467661 TNRQ92752 1358 aa23.1■■□□□ 1.29
NELFA-213ENST00000467661 MINK1Q8N4C8 1332 aaPredicted RBP23.1■■□□□ 1.29
NELFA-213ENST00000467661 NKTRP30414 1462 aaKnown RBP23.1■■□□□ 1.29
NELFA-213ENST00000467661 TNNT2P45379 298 aaPredicted RBP23.09■■□□□ 1.29
NELFA-213ENST00000467661 MED14O60244 1454 aa23.09■■□□□ 1.29
NELFA-213ENST00000467661 MTHFSP49914 203 aa23.08■■□□□ 1.28
NELFA-213ENST00000467661 RUNDC1Q96C34 613 aa23.08■■□□□ 1.28
NELFA-213ENST00000467661 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
NELFA-213ENST00000467661 HDGFP51858 240 aaKnown RBP23.06■■□□□ 1.28
NELFA-213ENST00000467661 MYT1Q01538 1121 aa23.06■■□□□ 1.28
NELFA-213ENST00000467661 PLIN1O60240 522 aa23.05■■□□□ 1.28
NELFA-213ENST00000467661 HDGFL2Q7Z4V5 671 aaPredicted RBP23.05■■□□□ 1.28
NELFA-213ENST00000467661 NRXN3Q9Y4C0 1643 aa23.05■■□□□ 1.28
NELFA-213ENST00000467661 IQSEC2Q5JU85 1478 aa23.05■■□□□ 1.28
NELFA-213ENST00000467661 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
NELFA-213ENST00000467661 ZNF142P52746 1687 aaPredicted RBP23.05■■□□□ 1.28
NELFA-213ENST00000467661 KIF20BQ96Q89 1820 aa23.04■■□□□ 1.28
NELFA-213ENST00000467661 CD163L1Q9NR16 1453 aa23.04■■□□□ 1.28
NELFA-213ENST00000467661 NCBP3Q53F19 620 aaKnown RBP23.03■■□□□ 1.28
NELFA-213ENST00000467661 CRBNQ96SW2 442 aa23.03■■□□□ 1.28
NELFA-213ENST00000467661 CDK19Q9BWU1 502 aa23.03■■□□□ 1.28
NELFA-213ENST00000467661 KNDC1Q76NI1 1749 aa23.03■■□□□ 1.28
NELFA-213ENST00000467661 UBR1Q8IWV7 1749 aa23.02■■□□□ 1.28
NELFA-213ENST00000467661 CEP170BQ9Y4F5 1589 aaPredicted RBP23.01■■□□□ 1.27
NELFA-213ENST00000467661 WWC1Q8IX03 1113 aa23■■□□□ 1.27
NELFA-213ENST00000467661 ATP7BP35670 1465 aa23■■□□□ 1.27
NELFA-213ENST00000467661 CCDC27Q2M243 656 aa22.97■■□□□ 1.27
NELFA-213ENST00000467661 TCP11L2Q8N4U5 519 aa22.97■■□□□ 1.27
NELFA-213ENST00000467661 SPINK5Q9NQ38 1064 aaPredicted RBP22.97■■□□□ 1.27
NELFA-213ENST00000467661 ADGRB2O60241 1585 aa22.97■■□□□ 1.27
NELFA-213ENST00000467661 TCERG1O14776 1098 aaKnown RBP22.96■■□□□ 1.27
NELFA-213ENST00000467661 FYB1O15117 783 aa22.96■■□□□ 1.27
NELFA-213ENST00000467661 WDR63Q8IWG1 891 aa22.96■■□□□ 1.27
NELFA-213ENST00000467661 GGNBP2Q9H3C7 697 aa22.96■■□□□ 1.27
NELFA-213ENST00000467661 FAM135BQ49AJ0 1406 aa22.95■■□□□ 1.26
NELFA-213ENST00000467661 SIRT1Q96EB6 747 aa22.94■■□□□ 1.26
NELFA-213ENST00000467661 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
NELFA-213ENST00000467661 CABP1Q9NZU7 370 aa22.94■■□□□ 1.26
NELFA-213ENST00000467661 TECPR2O15040 1411 aa22.94■■□□□ 1.26
NELFA-213ENST00000467661 CPS1P31327 1500 aa22.94■■□□□ 1.26
NELFA-213ENST00000467661 COL3A1P02461 1466 aaPredicted RBP22.94■■□□□ 1.26
NELFA-213ENST00000467661 LMTK3Q96Q04 1460 aa22.94■■□□□ 1.26
NELFA-213ENST00000467661 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
NELFA-213ENST00000467661 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
NELFA-213ENST00000467661 C20orf194Q5TEA3 1177 aa22.94■■□□□ 1.26
NELFA-213ENST00000467661 WAPLQ7Z5K2 1190 aa22.93■■□□□ 1.26
NELFA-213ENST00000467661 TMEM2Q9UHN6 1383 aa22.92■■□□□ 1.26
NELFA-213ENST00000467661 ANP32EQ9BTT0 268 aa22.91■■□□□ 1.26
NELFA-213ENST00000467661 METP08581 1390 aa22.91■■□□□ 1.26
NELFA-213ENST00000467661 DMRT2Q9Y5R5 561 aa22.91■■□□□ 1.26
NELFA-213ENST00000467661 WASLO00401 505 aaPredicted RBP22.89■■□□□ 1.26
NELFA-213ENST00000467661 MS4A1P11836 297 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms