RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 HSPA1LP34931 641 aa37.46■■■■□ 3.59
PDCD4-205ENST00000467574 TONSLQ96HA7 1378 aa37.43■■■■□ 3.58
PDCD4-205ENST00000467574 NBPF1Q3BBV0 1214 aa37.42■■■■□ 3.58
PDCD4-205ENST00000467574 PRAM1Q96QH2 718 aa37.4■■■■□ 3.58
PDCD4-205ENST00000467574 TRAK1Q9UPV9 953 aa37.4■■■■□ 3.58
PDCD4-205ENST00000467574 CLSPNQ9HAW4 1339 aa37.39■■■■□ 3.58
PDCD4-205ENST00000467574 FMN2Q9NZ56 1722 aa37.39■■■■□ 3.58
PDCD4-205ENST00000467574 ADGRB2O60241 1585 aa37.38■■■■□ 3.58
PDCD4-205ENST00000467574 C1orf167Q5SNV9 1468 aa37.37■■■■□ 3.57
PDCD4-205ENST00000467574 NBPF8Q3BBV2 869 aa37.35■■■■□ 3.57
PDCD4-205ENST00000467574 PHLPP1O60346 1717 aa37.35■■■■□ 3.57
PDCD4-205ENST00000467574 AHDC1Q5TGY3 1603 aaPredicted RBP37.35■■■■□ 3.57
PDCD4-205ENST00000467574 NHSL1Q5SYE7 1610 aa37.33■■■■□ 3.57
PDCD4-205ENST00000467574 BRINP3Q76B58 766 aa37.33■■■■□ 3.57
PDCD4-205ENST00000467574 COL16A1Q07092 1604 aaPredicted RBP37.31■■■■□ 3.56
PDCD4-205ENST00000467574 SAFB2Q14151 953 aaKnown RBP eCLIP37.3■■■■□ 3.56
PDCD4-205ENST00000467574 POGKQ9P215 609 aa37.29■■■■□ 3.56
PDCD4-205ENST00000467574 RALGAPBQ86X10 1494 aa37.26■■■■□ 3.56
PDCD4-205ENST00000467574 RGPD8O14715 1765 aaPredicted RBP37.26■■■■□ 3.56
PDCD4-205ENST00000467574 GPRASP1Q5JY77 1395 aa37.26■■■■□ 3.55
PDCD4-205ENST00000467574 ROCK2O75116 1388 aaKnown RBP37.24■■■■□ 3.55
PDCD4-205ENST00000467574 USP32Q8NFA0 1604 aa37.23■■■■□ 3.55
PDCD4-205ENST00000467574 QRICH2Q9H0J4 1663 aa37.21■■■■□ 3.55
PDCD4-205ENST00000467574 CCER1Q8TC90 406 aaPredicted RBP37.2■■■■□ 3.55
PDCD4-205ENST00000467574 MINK1Q8N4C8 1332 aaPredicted RBP37.19■■■■□ 3.54
PDCD4-205ENST00000467574 ORAI2Q96SN7 254 aa37.19■■■■□ 3.54
PDCD4-205ENST00000467574 HIRIP3Q9BW71 556 aaPredicted RBP37.17■■■■□ 3.54
PDCD4-205ENST00000467574 NUTM2FA1L443 756 aa37.15■■■■□ 3.54
PDCD4-205ENST00000467574 KIF1AQ12756 1690 aa37.14■■■■□ 3.54
PDCD4-205ENST00000467574 TULP4Q9NRJ4 1543 aa37.13■■■■□ 3.53
PDCD4-205ENST00000467574 ANKARQ7Z5J8 1434 aa37.12■■■■□ 3.53
PDCD4-205ENST00000467574 DDX17Q92841 729 aaKnown RBP37.11■■■■□ 3.53
PDCD4-205ENST00000467574 TIMELESSQ9UNS1 1208 aa37.11■■■■□ 3.53
PDCD4-205ENST00000467574 CENPJQ9HC77 1338 aaPredicted RBP37.1■■■■□ 3.53
PDCD4-205ENST00000467574 SHPRHQ149N8 1683 aa37.09■■■■□ 3.53
PDCD4-205ENST00000467574 WASLO00401 505 aaPredicted RBP37.08■■■■□ 3.53
PDCD4-205ENST00000467574 ESCO1Q5FWF5 840 aa37.08■■■■□ 3.53
PDCD4-205ENST00000467574 MED1Q15648 1581 aaPredicted RBP37.07■■■■□ 3.52
PDCD4-205ENST00000467574 EIF3AQ14152 1382 aaKnown RBP37.05■■■■□ 3.52
PDCD4-205ENST00000467574 ATP7BP35670 1465 aa37.05■■■■□ 3.52
PDCD4-205ENST00000467574 PRR36Q9H6K5 1346 aa37.05■■■■□ 3.52
PDCD4-205ENST00000467574 PXDNQ92626 1479 aa37.04■■■■□ 3.52
PDCD4-205ENST00000467574 ITSN1Q15811 1721 aa37.04■■■■□ 3.52
PDCD4-205ENST00000467574 JCADQ9P266 1359 aa37.04■■■■□ 3.52
PDCD4-205ENST00000467574 TOPAZ1Q8N9V7 1692 aa37.03■■■■□ 3.52
PDCD4-205ENST00000467574 CARD11Q9BXL7 1154 aa37.02■■■■□ 3.52
PDCD4-205ENST00000467574 SOS2Q07890 1332 aaPredicted RBP37.02■■■■□ 3.52
PDCD4-205ENST00000467574 NPHP3Q7Z494 1330 aa36.98■■■■□ 3.51
PDCD4-205ENST00000467574 CDK19Q9BWU1 502 aa36.96■■■■□ 3.51
PDCD4-205ENST00000467574 PHF8Q9UPP1 1060 aa36.96■■■■□ 3.51
PDCD4-205ENST00000467574 FOXO3O43524 673 aa36.95■■■■□ 3.51
PDCD4-205ENST00000467574 SBNO2Q9Y2G9 1366 aa36.92■■■■□ 3.5
PDCD4-205ENST00000467574 LRRC59Q96AG4 307 aaKnown RBP36.91■■■■□ 3.5
PDCD4-205ENST00000467574 PNPLA6Q8IY17 1366 aa36.91■■■■□ 3.5
PDCD4-205ENST00000467574 NUDT16Q96DE0 195 aaKnown RBP36.89■■■■□ 3.5
PDCD4-205ENST00000467574 COL22A1Q8NFW1 1626 aaPredicted RBP36.88■■■■□ 3.5
PDCD4-205ENST00000467574 XPCQ01831 940 aaPredicted RBP36.88■■■■□ 3.49
PDCD4-205ENST00000467574 LRP6O75581 1613 aa36.88■■■■□ 3.49
PDCD4-205ENST00000467574 TRPM3Q9HCF6 1732 aaPredicted RBP36.88■■■■□ 3.49
PDCD4-205ENST00000467574 PMFBP1Q8TBY8 1022 aa36.86■■■■□ 3.49
PDCD4-205ENST00000467574 SPATA31A6Q5VVP1 1343 aa36.85■■■■□ 3.49
PDCD4-205ENST00000467574 CABP2Q9NPB3 220 aa36.82■■■■□ 3.48
PDCD4-205ENST00000467574 EVC2Q86UK5 1308 aa36.82■■■■□ 3.48
PDCD4-205ENST00000467574 DISP3Q9P2K9 1392 aa36.8■■■■□ 3.48
PDCD4-205ENST00000467574 SRPK2P78362 688 aaKnown RBP36.8■■■■□ 3.48
PDCD4-205ENST00000467574 USP47Q96K76 1375 aa36.79■■■■□ 3.48
PDCD4-205ENST00000467574 KRT28Q7Z3Y7 464 aa36.79■■■■□ 3.48
PDCD4-205ENST00000467574 CCDC61Q9Y6R9 512 aa36.79■■■■□ 3.48
PDCD4-205ENST00000467574 TNS3Q68CZ2 1445 aa36.77■■■■□ 3.48
PDCD4-205ENST00000467574 ALS2Q96Q42 1657 aa36.77■■■■□ 3.48
PDCD4-205ENST00000467574 SPATA31A3Q5VYP0 1347 aa36.77■■■■□ 3.48
PDCD4-205ENST00000467574 SBNO1A3KN83 1393 aa36.77■■■■□ 3.48
PDCD4-205ENST00000467574 POLR3AO14802 1390 aaPredicted RBP36.77■■■■□ 3.48
PDCD4-205ENST00000467574 PPIP5K1Q6PFW1 1433 aa36.76■■■■□ 3.48
PDCD4-205ENST00000467574 TESK2Q96S53 571 aa36.75■■■■□ 3.47
PDCD4-205ENST00000467574 ST20-MTHFSA0A0A6YYL1 179 aa36.74■■■■□ 3.47
PDCD4-205ENST00000467574 PLEKHG3A1L390 1219 aa36.74■■■■□ 3.47
PDCD4-205ENST00000467574 PSME1Q06323 249 aa36.72■■■■□ 3.47
PDCD4-205ENST00000467574 NGDNQ8NEJ9 315 aaKnown RBP36.71■■■■□ 3.47
PDCD4-205ENST00000467574 ABCA3Q99758 1704 aa36.7■■■■□ 3.47
PDCD4-205ENST00000467574 ACEP12821 1306 aa36.69■■■■□ 3.46
PDCD4-205ENST00000467574 AKAP12Q02952 1782 aa36.67■■■■□ 3.46
PDCD4-205ENST00000467574 ATAD2Q6PL18 1390 aa36.66■■■■□ 3.46
PDCD4-205ENST00000467574 MARF1Q9Y4F3 1742 aaKnown RBP36.66■■■■□ 3.46
PDCD4-205ENST00000467574 NUTM2BA6NNL0 878 aaPredicted RBP36.66■■■■□ 3.46
PDCD4-205ENST00000467574 NUTM2EB1AL46 878 aaPredicted RBP36.66■■■■□ 3.46
PDCD4-205ENST00000467574 NUTM2AQ8IVF1 878 aaPredicted RBP36.66■■■■□ 3.46
PDCD4-205ENST00000467574 CRYBG1Q9Y4K1 1723 aa36.64■■■■□ 3.46
PDCD4-205ENST00000467574 CABP1Q9NZU7 370 aa36.63■■■■□ 3.45
PDCD4-205ENST00000467574 ARHGEF10O15013 1369 aa36.63■■■■□ 3.45
PDCD4-205ENST00000467574 RGS17Q9UGC6 210 aaPredicted RBP36.61■■■■□ 3.45
PDCD4-205ENST00000467574 PHF23Q9BUL5 403 aaPredicted RBP36.6■■■■□ 3.45
PDCD4-205ENST00000467574 MON2Q7Z3U7 1717 aa36.57■■■■□ 3.45
PDCD4-205ENST00000467574 USP6P35125 1406 aa36.57■■■■□ 3.44
PDCD4-205ENST00000467574 NRKQ7Z2Y5 1582 aa36.57■■■■□ 3.44
PDCD4-205ENST00000467574 MEX3CQ5U5Q3 659 aaKnown RBP36.56■■■■□ 3.44
PDCD4-205ENST00000467574 PUS7Q96PZ0 661 aaKnown RBP36.56■■■■□ 3.44
PDCD4-205ENST00000467574 CPSF1Q10570 1443 aaKnown RBP36.54■■■■□ 3.44
PDCD4-205ENST00000467574 CD163L1Q9NR16 1453 aa36.54■■■■□ 3.44
PDCD4-205ENST00000467574 SSH2Q76I76 1423 aa36.53■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms