RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 NPATQ14207 1427 aa27.6■■■□□ 2.01
LINC01140-202ENST00000467438 MTHFSP49914 203 aa27.6■■■□□ 2.01
LINC01140-202ENST00000467438 C14orf93Q9H972 538 aaKnown RBP27.6■■■□□ 2.01
LINC01140-202ENST00000467438 DAXXQ9UER7 740 aaPredicted RBP27.6■■■□□ 2.01
LINC01140-202ENST00000467438 SHPRHQ149N8 1683 aa27.6■■■□□ 2.01
LINC01140-202ENST00000467438 MYO3AQ8NEV4 1616 aa27.59■■■□□ 2.01
LINC01140-202ENST00000467438 SBNO2Q9Y2G9 1366 aa27.59■■■□□ 2.01
LINC01140-202ENST00000467438 ADGRB3O60242 1522 aa27.59■■■□□ 2.01
LINC01140-202ENST00000467438 SEC24BO95487 1268 aa27.58■■■□□ 2.01
LINC01140-202ENST00000467438 CLUAP1Q96AJ1 413 aa27.58■■■□□ 2.01
LINC01140-202ENST00000467438 RLBP1P12271 317 aa27.57■■■□□ 2
LINC01140-202ENST00000467438 PDE3AQ14432 1141 aa27.57■■■□□ 2
LINC01140-202ENST00000467438 RUNDC1Q96C34 613 aa27.57■■■□□ 2
LINC01140-202ENST00000467438 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
LINC01140-202ENST00000467438 RARSP54136 660 aaKnown RBP27.55■■■□□ 2
LINC01140-202ENST00000467438 CGNL1Q0VF96 1302 aa27.55■■■□□ 2
LINC01140-202ENST00000467438 QRICH2Q9H0J4 1663 aa27.55■■■□□ 2
LINC01140-202ENST00000467438 ZNF518AQ6AHZ1 1483 aa27.54■■■□□ 2
LINC01140-202ENST00000467438 ADGRB1O14514 1584 aa27.54■■■□□ 2
LINC01140-202ENST00000467438 USP19O94966 1318 aa27.52■■■□□ 2
LINC01140-202ENST00000467438 RTN4Q9NQC3 1192 aaKnown RBP27.52■■■□□ 2
LINC01140-202ENST00000467438 LMTK2Q8IWU2 1503 aa27.52■■■□□ 2
LINC01140-202ENST00000467438 SETBP1Q9Y6X0 1596 aa27.51■■□□□ 1.99
LINC01140-202ENST00000467438 NGEFQ8N5V2 710 aa27.51■■□□□ 1.99
LINC01140-202ENST00000467438 CABP2Q9NPB3 220 aa27.51■■□□□ 1.99
LINC01140-202ENST00000467438 PCDHB15Q9Y5E8 787 aa27.51■■□□□ 1.99
LINC01140-202ENST00000467438 IQSEC2Q5JU85 1478 aa27.5■■□□□ 1.99
LINC01140-202ENST00000467438 FRMPD1Q5SYB0 1578 aa27.49■■□□□ 1.99
LINC01140-202ENST00000467438 PPLO60437 1756 aa27.49■■□□□ 1.99
LINC01140-202ENST00000467438 ZC3H13Q5T200 1668 aaKnown RBP27.49■■□□□ 1.99
LINC01140-202ENST00000467438 PRKCSHP14314 528 aaPredicted RBP27.48■■□□□ 1.99
LINC01140-202ENST00000467438 PHF23Q9BUL5 403 aaPredicted RBP27.48■■□□□ 1.99
LINC01140-202ENST00000467438 FRAT2O75474 233 aaPredicted RBP27.47■■□□□ 1.99
LINC01140-202ENST00000467438 U2AF1L5P0DN76 240 aaPredicted RBP27.45■■□□□ 1.99
LINC01140-202ENST00000467438 U2AF1Q01081 240 aaKnown RBP eCLIP27.45■■□□□ 1.99
LINC01140-202ENST00000467438 GSE1Q14687 1217 aa27.44■■□□□ 1.98
LINC01140-202ENST00000467438 RAPGEF3O95398 923 aa27.43■■□□□ 1.98
LINC01140-202ENST00000467438 STK26Q9P289 416 aa27.43■■□□□ 1.98
LINC01140-202ENST00000467438 WDR63Q8IWG1 891 aa27.42■■□□□ 1.98
LINC01140-202ENST00000467438 TSR2Q969E8 191 aaKnown RBP27.42■■□□□ 1.98
LINC01140-202ENST00000467438 TULP4Q9NRJ4 1543 aa27.41■■□□□ 1.98
LINC01140-202ENST00000467438 CD109Q6YHK3 1445 aa27.41■■□□□ 1.98
LINC01140-202ENST00000467438 POGZQ7Z3K3 1410 aa27.41■■□□□ 1.98
LINC01140-202ENST00000467438 CFAP53Q96M91 514 aa27.41■■□□□ 1.98
LINC01140-202ENST00000467438 NINLQ9Y2I6 1382 aa27.4■■□□□ 1.98
LINC01140-202ENST00000467438 EVC2Q86UK5 1308 aa27.39■■□□□ 1.98
LINC01140-202ENST00000467438 GLI2P10070 1586 aa27.39■■□□□ 1.97
LINC01140-202ENST00000467438 SIGLEC1Q9BZZ2 1709 aa27.38■■□□□ 1.97
LINC01140-202ENST00000467438 BRPF3Q9ULD4 1205 aa27.38■■□□□ 1.97
LINC01140-202ENST00000467438 PDZRN3Q9UPQ7 1066 aa27.38■■□□□ 1.97
LINC01140-202ENST00000467438 ABCC3O15438 1527 aa27.37■■□□□ 1.97
LINC01140-202ENST00000467438 MAPK8IP3Q9UPT6 1336 aa27.37■■□□□ 1.97
LINC01140-202ENST00000467438 GGNBP2Q9H3C7 697 aa27.37■■□□□ 1.97
LINC01140-202ENST00000467438 NPM1P06748 294 aaKnown RBP eCLIP27.37■■□□□ 1.97
LINC01140-202ENST00000467438 ANKRD36BQ8N2N9 1353 aa27.36■■□□□ 1.97
LINC01140-202ENST00000467438 RPGRIP1LQ68CZ1 1315 aa27.35■■□□□ 1.97
LINC01140-202ENST00000467438 U2SURPO15042 1029 aaKnown RBP27.35■■□□□ 1.97
LINC01140-202ENST00000467438 CCDC27Q2M243 656 aa27.34■■□□□ 1.97
LINC01140-202ENST00000467438 HECW2Q9P2P5 1572 aa27.34■■□□□ 1.97
LINC01140-202ENST00000467438 VIRMAQ69YN4 1812 aaKnown RBP27.34■■□□□ 1.97
LINC01140-202ENST00000467438 PMFBP1Q8TBY8 1022 aa27.34■■□□□ 1.97
LINC01140-202ENST00000467438 IDI1Q13907 227 aa27.33■■□□□ 1.97
LINC01140-202ENST00000467438 MLH3Q9UHC1 1453 aa27.33■■□□□ 1.97
LINC01140-202ENST00000467438 VGFO15240 615 aaPredicted RBP27.32■■□□□ 1.96
LINC01140-202ENST00000467438 SRPK2P78362 688 aaKnown RBP27.32■■□□□ 1.96
LINC01140-202ENST00000467438 A0A1W2PP64 1363 aa27.32■■□□□ 1.96
LINC01140-202ENST00000467438 NLRP1Q9C000 1473 aa27.32■■□□□ 1.96
LINC01140-202ENST00000467438 ARHGEF28Q8N1W1 1705 aaKnown RBP27.32■■□□□ 1.96
LINC01140-202ENST00000467438 SLKQ9H2G2 1235 aaPredicted RBP27.31■■□□□ 1.96
LINC01140-202ENST00000467438 USP32Q8NFA0 1604 aa27.31■■□□□ 1.96
LINC01140-202ENST00000467438 MYH16Q9H6N6 1097 aa27.31■■□□□ 1.96
LINC01140-202ENST00000467438 CAMSAP1Q5T5Y3 1602 aa27.3■■□□□ 1.96
LINC01140-202ENST00000467438 EXOSC9Q06265 439 aaKnown RBP27.3■■□□□ 1.96
LINC01140-202ENST00000467438 NEXMIFQ5QGS0 1516 aa27.29■■□□□ 1.96
LINC01140-202ENST00000467438 MVPQ14764 893 aaKnown RBP27.28■■□□□ 1.96
LINC01140-202ENST00000467438 MINK1Q8N4C8 1332 aaPredicted RBP27.28■■□□□ 1.96
LINC01140-202ENST00000467438 PLEKHF1Q96S99 279 aa27.28■■□□□ 1.96
LINC01140-202ENST00000467438 TRIM35Q9UPQ4 493 aa27.27■■□□□ 1.96
LINC01140-202ENST00000467438 FTSJ3Q8IY81 847 aaKnown RBP27.26■■□□□ 1.95
LINC01140-202ENST00000467438 TMPOP42166 694 aaKnown RBP27.25■■□□□ 1.95
LINC01140-202ENST00000467438 ZKSCAN2Q63HK3 967 aa27.25■■□□□ 1.95
LINC01140-202ENST00000467438 SMC4Q9NTJ3 1288 aa27.25■■□□□ 1.95
LINC01140-202ENST00000467438 DZIP1LQ8IYY4 767 aaKnown RBP27.24■■□□□ 1.95
LINC01140-202ENST00000467438 RWDD1Q9H446 243 aaPredicted RBP27.24■■□□□ 1.95
LINC01140-202ENST00000467438 FBLN1P23142 703 aa27.23■■□□□ 1.95
LINC01140-202ENST00000467438 SSH1Q8WYL5 1049 aa27.23■■□□□ 1.95
LINC01140-202ENST00000467438 FYB1O15117 783 aa27.23■■□□□ 1.95
LINC01140-202ENST00000467438 TRIM27P14373 513 aa27.23■■□□□ 1.95
LINC01140-202ENST00000467438 NSD2O96028 1365 aa27.22■■□□□ 1.95
LINC01140-202ENST00000467438 ADGRB2O60241 1585 aa27.22■■□□□ 1.95
LINC01140-202ENST00000467438 PRAM1Q96QH2 718 aa27.22■■□□□ 1.95
LINC01140-202ENST00000467438 ABCC11Q96J66 1382 aa27.21■■□□□ 1.95
LINC01140-202ENST00000467438 PIK3C2BO00750 1634 aa27.21■■□□□ 1.95
LINC01140-202ENST00000467438 PUS7Q96PZ0 661 aaKnown RBP27.2■■□□□ 1.95
LINC01140-202ENST00000467438 SPRYD3Q8NCJ5 442 aa27.2■■□□□ 1.94
LINC01140-202ENST00000467438 TBC1D32Q96NH3 1257 aa27.2■■□□□ 1.94
LINC01140-202ENST00000467438 ITPRIPQ8IWB1 547 aa27.19■■□□□ 1.94
LINC01140-202ENST00000467438 NOB1Q9ULX3 412 aaKnown RBP27.18■■□□□ 1.94
LINC01140-202ENST00000467438 RIPK4P57078 832 aa27.17■■□□□ 1.94
LINC01140-202ENST00000467438 AAMPQ13685 434 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms