RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 ANKRD36BQ8N2N9 1353 aa13.92□□□□□ -0.18
CDCA7-206ENST00000467411 NLRP13Q86W25 1043 aa13.92□□□□□ -0.18
CDCA7-206ENST00000467411 KIF20BQ96Q89 1820 aa13.92□□□□□ -0.18
CDCA7-206ENST00000467411 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.92□□□□□ -0.18
CDCA7-206ENST00000467411 MRS2Q9HD23 443 aa13.91□□□□□ -0.18
CDCA7-206ENST00000467411 STAG3Q9UJ98 1225 aa13.91□□□□□ -0.18
CDCA7-206ENST00000467411 BLMP54132 1417 aaPredicted RBP13.91□□□□□ -0.18
CDCA7-206ENST00000467411 MON2Q7Z3U7 1717 aa13.91□□□□□ -0.18
CDCA7-206ENST00000467411 CARD14Q9BXL6 1004 aa13.91□□□□□ -0.18
CDCA7-206ENST00000467411 PTCH1Q13635 1447 aa13.91□□□□□ -0.18
CDCA7-206ENST00000467411 SETD1BQ9UPS6 1966 aaKnown RBP13.91□□□□□ -0.18
CDCA7-206ENST00000467411 ATAD2Q6PL18 1390 aa13.9□□□□□ -0.18
CDCA7-206ENST00000467411 NSD2O96028 1365 aa13.9□□□□□ -0.18
CDCA7-206ENST00000467411 ATP7BP35670 1465 aa13.9□□□□□ -0.18
CDCA7-206ENST00000467411 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
CDCA7-206ENST00000467411 SHPRHQ149N8 1683 aa13.89□□□□□ -0.19
CDCA7-206ENST00000467411 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
CDCA7-206ENST00000467411 CHD2O14647 1828 aaKnown RBP13.89□□□□□ -0.19
CDCA7-206ENST00000467411 PTPRUQ92729 1446 aa13.88□□□□□ -0.19
CDCA7-206ENST00000467411 PIK3R4Q99570 1358 aa13.88□□□□□ -0.19
CDCA7-206ENST00000467411 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
CDCA7-206ENST00000467411 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
CDCA7-206ENST00000467411 LTKP29376 864 aa13.87□□□□□ -0.19
CDCA7-206ENST00000467411 KNSTRNQ9Y448 316 aa13.87□□□□□ -0.19
CDCA7-206ENST00000467411 CEBPAP49715 358 aaPredicted RBP13.87□□□□□ -0.19
CDCA7-206ENST00000467411 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
CDCA7-206ENST00000467411 NSD3Q9BZ95 1437 aa13.86□□□□□ -0.19
CDCA7-206ENST00000467411 PLEKHH1Q9ULM0 1364 aa13.86□□□□□ -0.19
CDCA7-206ENST00000467411 ITSN1Q15811 1721 aa13.86□□□□□ -0.19
CDCA7-206ENST00000467411 THEMISQ8N1K5 641 aaPredicted RBP13.85□□□□□ -0.19
CDCA7-206ENST00000467411 TBX22Q9Y458 520 aa13.85□□□□□ -0.19
CDCA7-206ENST00000467411 CPSF1Q10570 1443 aaKnown RBP13.85□□□□□ -0.19
CDCA7-206ENST00000467411 NWD1Q149M9 1564 aa13.84□□□□□ -0.19
CDCA7-206ENST00000467411 PPP2R1AP30153 589 aa13.84□□□□□ -0.19
CDCA7-206ENST00000467411 USP54Q70EL1 1684 aa13.83□□□□□ -0.2
CDCA7-206ENST00000467411 A0A1W2PP64 1363 aa13.83□□□□□ -0.2
CDCA7-206ENST00000467411 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.2
CDCA7-206ENST00000467411 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
CDCA7-206ENST00000467411 TMC1Q8TDI8 760 aa13.81□□□□□ -0.2
CDCA7-206ENST00000467411 SLC12A5Q9H2X9 1139 aa13.81□□□□□ -0.2
CDCA7-206ENST00000467411 FMN2Q9NZ56 1722 aa13.81□□□□□ -0.2
CDCA7-206ENST00000467411 CC2D1BQ5T0F9 858 aaKnown RBP13.81□□□□□ -0.2
CDCA7-206ENST00000467411 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
CDCA7-206ENST00000467411 STK26Q9P289 416 aa13.8□□□□□ -0.2
CDCA7-206ENST00000467411 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
CDCA7-206ENST00000467411 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
CDCA7-206ENST00000467411 CGNL1Q0VF96 1302 aa13.8□□□□□ -0.2
CDCA7-206ENST00000467411 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDCA7-206ENST00000467411 TXNDC2Q86VQ3 553 aa13.79□□□□□ -0.2
CDCA7-206ENST00000467411 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
CDCA7-206ENST00000467411 NALCNQ8IZF0 1738 aa13.79□□□□□ -0.2
CDCA7-206ENST00000467411 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
CDCA7-206ENST00000467411 FAM9BQ8IZU0 186 aa13.79□□□□□ -0.2
CDCA7-206ENST00000467411 POGKQ9P215 609 aa13.79□□□□□ -0.2
CDCA7-206ENST00000467411 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
CDCA7-206ENST00000467411 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
CDCA7-206ENST00000467411 WAPLQ7Z5K2 1190 aa13.77□□□□□ -0.21
CDCA7-206ENST00000467411 MINK1Q8N4C8 1332 aaPredicted RBP13.76□□□□□ -0.21
CDCA7-206ENST00000467411 EDC4Q6P2E9 1401 aaKnown RBP13.76□□□□□ -0.21
CDCA7-206ENST00000467411 LRRC7Q96NW7 1537 aa13.76□□□□□ -0.21
CDCA7-206ENST00000467411 ANKARQ7Z5J8 1434 aa13.75□□□□□ -0.21
CDCA7-206ENST00000467411 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
CDCA7-206ENST00000467411 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
CDCA7-206ENST00000467411 SSH2Q76I76 1423 aa13.74□□□□□ -0.21
CDCA7-206ENST00000467411 SRPK2P78362 688 aaKnown RBP13.73□□□□□ -0.21
CDCA7-206ENST00000467411 NKTRP30414 1462 aaKnown RBP13.73□□□□□ -0.21
CDCA7-206ENST00000467411 IQSEC2Q5JU85 1478 aa13.73□□□□□ -0.21
CDCA7-206ENST00000467411 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
CDCA7-206ENST00000467411 MARF1Q9Y4F3 1742 aaKnown RBP13.72□□□□□ -0.21
CDCA7-206ENST00000467411 PNPLA6Q8IY17 1366 aa13.72□□□□□ -0.21
CDCA7-206ENST00000467411 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.21
CDCA7-206ENST00000467411 NPHP4O75161 1426 aaPredicted RBP13.71□□□□□ -0.21
CDCA7-206ENST00000467411 RNF123Q5XPI4 1314 aa13.71□□□□□ -0.22
CDCA7-206ENST00000467411 PRR36Q9H6K5 1346 aa13.71□□□□□ -0.22
CDCA7-206ENST00000467411 PLEKHG3A1L390 1219 aa13.71□□□□□ -0.22
CDCA7-206ENST00000467411 SAFB2Q14151 953 aaKnown RBP eCLIP13.71□□□□□ -0.22
CDCA7-206ENST00000467411 ZNF521Q96K83 1311 aa13.7□□□□□ -0.22
CDCA7-206ENST00000467411 FYB1O15117 783 aa13.7□□□□□ -0.22
CDCA7-206ENST00000467411 PDE3BQ13370 1112 aa13.7□□□□□ -0.22
CDCA7-206ENST00000467411 AMOTL2Q9Y2J4 779 aa13.7□□□□□ -0.22
CDCA7-206ENST00000467411 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
CDCA7-206ENST00000467411 ANKLE2Q86XL3 938 aa13.69□□□□□ -0.22
CDCA7-206ENST00000467411 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
CDCA7-206ENST00000467411 AATKQ6ZMQ8 1374 aa13.69□□□□□ -0.22
CDCA7-206ENST00000467411 MAP2P11137 1827 aaKnown RBP13.69□□□□□ -0.22
CDCA7-206ENST00000467411 NUDT16Q96DE0 195 aaKnown RBP13.69□□□□□ -0.22
CDCA7-206ENST00000467411 MORC1Q86VD1 984 aa13.68□□□□□ -0.22
CDCA7-206ENST00000467411 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
CDCA7-206ENST00000467411 NGEFQ8N5V2 710 aa13.68□□□□□ -0.22
CDCA7-206ENST00000467411 ADAMTS8Q9UP79 889 aa13.68□□□□□ -0.22
CDCA7-206ENST00000467411 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
CDCA7-206ENST00000467411 SLC26A8Q96RN1 970 aa13.67□□□□□ -0.22
CDCA7-206ENST00000467411 NUDCQ9Y266 331 aa13.67□□□□□ -0.22
CDCA7-206ENST00000467411 USP6P35125 1406 aa13.66□□□□□ -0.22
CDCA7-206ENST00000467411 OVOS2A0A0J9YW53 1432 aa13.66□□□□□ -0.22
CDCA7-206ENST00000467411 OVOS2Q6IE36 1432 aa13.66□□□□□ -0.22
CDCA7-206ENST00000467411 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
CDCA7-206ENST00000467411 PIK3C2AO00443 1686 aa13.65□□□□□ -0.22
CDCA7-206ENST00000467411 CDK12Q9NYV4 1490 aaPredicted RBP13.65□□□□□ -0.22
CDCA7-206ENST00000467411 RGPD1P0DJD0 1748 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms