RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 POTECB2RU33 542 aa8.67□□□□□ -1.02
VPS50-209ENST00000467326 ZNF697Q5TEC3 545 aa8.67□□□□□ -1.02
VPS50-209ENST00000467326 FAM187AA6NFU0 413 aa8.66□□□□□ -1.02
VPS50-209ENST00000467326 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
VPS50-209ENST00000467326 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
VPS50-209ENST00000467326 NEUROD2Q15784 382 aa8.65□□□□□ -1.02
VPS50-209ENST00000467326 SCUBE3Q8IX30 993 aa8.65□□□□□ -1.02
VPS50-209ENST00000467326 HLA-CQ95604 372 aa8.65□□□□□ -1.02
VPS50-209ENST00000467326 SLC27A5Q9Y2P5 690 aa8.65□□□□□ -1.02
VPS50-209ENST00000467326 ADH1BP00325 375 aa8.64□□□□□ -1.03
VPS50-209ENST00000467326 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
VPS50-209ENST00000467326 DIXDC1Q155Q3 683 aa8.63□□□□□ -1.03
VPS50-209ENST00000467326 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
VPS50-209ENST00000467326 TBC1D2Q9BYX2 928 aa8.63□□□□□ -1.03
VPS50-209ENST00000467326 Q3C1V9 767 aa8.62□□□□□ -1.03
VPS50-209ENST00000467326 RNF19BQ6ZMZ0 732 aa8.62□□□□□ -1.03
VPS50-209ENST00000467326 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
VPS50-209ENST00000467326 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
VPS50-209ENST00000467326 FDX1P10109 184 aa8.61□□□□□ -1.03
VPS50-209ENST00000467326 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
VPS50-209ENST00000467326 THAP11Q96EK4 314 aa8.61□□□□□ -1.03
VPS50-209ENST00000467326 SPSB2Q99619 263 aa8.61□□□□□ -1.03
VPS50-209ENST00000467326 GDF9O60383 454 aa8.6□□□□□ -1.03
VPS50-209ENST00000467326 S1PR4O95977 384 aa8.6□□□□□ -1.03
VPS50-209ENST00000467326 DDRGK1Q96HY6 314 aa8.6□□□□□ -1.03
VPS50-209ENST00000467326 SALL2Q9Y467 1007 aaPredicted RBP8.6□□□□□ -1.03
VPS50-209ENST00000467326 TNFRSF10AO00220 468 aa8.59□□□□□ -1.03
VPS50-209ENST00000467326 NDUFV2P19404 249 aa8.59□□□□□ -1.03
VPS50-209ENST00000467326 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
VPS50-209ENST00000467326 FAM117AQ9C073 453 aa8.59□□□□□ -1.03
VPS50-209ENST00000467326 SLC6A16Q9GZN6 736 aa8.59□□□□□ -1.03
VPS50-209ENST00000467326 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
VPS50-209ENST00000467326 RSBN1LQ6PCB5 846 aaPredicted RBP8.58□□□□□ -1.04
VPS50-209ENST00000467326 BRICD5Q6PL45 260 aa8.58□□□□□ -1.04
VPS50-209ENST00000467326 EMID1Q96A84 441 aaPredicted RBP8.58□□□□□ -1.04
VPS50-209ENST00000467326 GJA5P36382 358 aa8.57□□□□□ -1.04
VPS50-209ENST00000467326 AAASQ9NRG9 546 aa8.57□□□□□ -1.04
VPS50-209ENST00000467326 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
VPS50-209ENST00000467326 PPEF1O14829 653 aaPredicted RBP8.56□□□□□ -1.04
VPS50-209ENST00000467326 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
VPS50-209ENST00000467326 CRIPAKQ8N1N5 446 aa8.56□□□□□ -1.04
VPS50-209ENST00000467326 RSPH6AQ9H0K4 717 aa8.56□□□□□ -1.04
VPS50-209ENST00000467326 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
VPS50-209ENST00000467326 C6orf229H3BNL8 230 aa8.55□□□□□ -1.04
VPS50-209ENST00000467326 SPTLC1O15269 473 aa8.55□□□□□ -1.04
VPS50-209ENST00000467326 CLK2P49760 499 aaKnown RBP8.55□□□□□ -1.04
VPS50-209ENST00000467326 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
VPS50-209ENST00000467326 USB1Q9BQ65 265 aaKnown RBP8.55□□□□□ -1.04
VPS50-209ENST00000467326 PRDM9Q9NQV7 894 aa8.55□□□□□ -1.04
VPS50-209ENST00000467326 CD2BP2O95400 341 aaKnown RBP8.54□□□□□ -1.04
VPS50-209ENST00000467326 INSM1Q01101 510 aaPredicted RBP8.54□□□□□ -1.04
VPS50-209ENST00000467326 CTC1Q2NKJ3 1217 aa8.54□□□□□ -1.04
VPS50-209ENST00000467326 RETREG3Q86VR2 466 aa8.54□□□□□ -1.04
VPS50-209ENST00000467326 SYMPKQ92797 1274 aaKnown RBP8.54□□□□□ -1.04
VPS50-209ENST00000467326 STK17AQ9UEE5 414 aa8.54□□□□□ -1.04
VPS50-209ENST00000467326 LIMD1Q9UGP4 676 aa8.54□□□□□ -1.04
VPS50-209ENST00000467326 WFS1O76024 890 aa8.53□□□□□ -1.04
VPS50-209ENST00000467326 RPIAP49247 311 aa8.53□□□□□ -1.04
VPS50-209ENST00000467326 SH3D19Q5HYK7 790 aa8.53□□□□□ -1.04
VPS50-209ENST00000467326 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
VPS50-209ENST00000467326 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
VPS50-209ENST00000467326 MTMR2Q13614 643 aa8.52□□□□□ -1.05
VPS50-209ENST00000467326 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.05
VPS50-209ENST00000467326 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
VPS50-209ENST00000467326 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
VPS50-209ENST00000467326 AXIN1O15169 862 aa8.51□□□□□ -1.05
VPS50-209ENST00000467326 FOXC1Q12948 553 aa8.51□□□□□ -1.05
VPS50-209ENST00000467326 CYP4X1Q8N118 509 aa8.51□□□□□ -1.05
VPS50-209ENST00000467326 POLR3EQ9NVU0 708 aa8.51□□□□□ -1.05
VPS50-209ENST00000467326 PCDHB15Q9Y5E8 787 aa8.51□□□□□ -1.05
VPS50-209ENST00000467326 C11orf95C9JLR9 678 aaPredicted RBP8.5□□□□□ -1.05
VPS50-209ENST00000467326 AVPP01185 164 aa8.5□□□□□ -1.05
VPS50-209ENST00000467326 TUSC1Q2TAM9 212 aa8.5□□□□□ -1.05
VPS50-209ENST00000467326 PRPF38BQ5VTL8 546 aaKnown RBP8.5□□□□□ -1.05
VPS50-209ENST00000467326 FCF1Q9Y324 198 aaKnown RBP8.5□□□□□ -1.05
VPS50-209ENST00000467326 DXOO77932 396 aaKnown RBP8.49□□□□□ -1.05
VPS50-209ENST00000467326 HRCP23327 699 aa8.49□□□□□ -1.05
VPS50-209ENST00000467326 MMP16P51512 607 aa8.49□□□□□ -1.05
VPS50-209ENST00000467326 IL27Q8NEV9 243 aa8.49□□□□□ -1.05
VPS50-209ENST00000467326 CABLES1Q8TDN4 633 aa8.49□□□□□ -1.05
VPS50-209ENST00000467326 JUNDP17535 347 aa8.48□□□□□ -1.05
VPS50-209ENST00000467326 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
VPS50-209ENST00000467326 QPCTQ16769 361 aa8.48□□□□□ -1.05
VPS50-209ENST00000467326 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
VPS50-209ENST00000467326 PKD2L1Q9P0L9 805 aa8.47□□□□□ -1.05
VPS50-209ENST00000467326 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.06
VPS50-209ENST00000467326 NUTM2BA6NNL0 878 aaPredicted RBP8.46□□□□□ -1.06
VPS50-209ENST00000467326 NUTM2EB1AL46 878 aaPredicted RBP8.46□□□□□ -1.06
VPS50-209ENST00000467326 CFAP99D6REC4 459 aa8.46□□□□□ -1.06
VPS50-209ENST00000467326 LILRB3O75022 631 aa8.46□□□□□ -1.06
VPS50-209ENST00000467326 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.06
VPS50-209ENST00000467326 NUTM2DQ5VT03 806 aaPredicted RBP8.46□□□□□ -1.06
VPS50-209ENST00000467326 NUTM2AQ8IVF1 878 aaPredicted RBP8.46□□□□□ -1.06
VPS50-209ENST00000467326 KRTAP4-6Q9BYQ5 205 aa8.46□□□□□ -1.06
VPS50-209ENST00000467326 ATP1B4Q9UN42 357 aaPredicted RBP8.46□□□□□ -1.06
VPS50-209ENST00000467326 ZBTB24O43167 697 aaPredicted RBP8.45□□□□□ -1.06
VPS50-209ENST00000467326 WIPF1O43516 503 aa8.45□□□□□ -1.06
VPS50-209ENST00000467326 PLA2G2CQ5R387 149 aa8.45□□□□□ -1.06
VPS50-209ENST00000467326 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
VPS50-209ENST00000467326 TOR4AQ9NXH8 423 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms