RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 MTMR2Q13614 643 aa7.05□□□□□ -1.28
MSH2-205ENST00000467323 TSC1Q92574 1164 aa7.05□□□□□ -1.28
MSH2-205ENST00000467323 IGSF5Q9NSI5 407 aa7.05□□□□□ -1.28
MSH2-205ENST00000467323 NUDT18Q6ZVK8 323 aa7.04□□□□□ -1.28
MSH2-205ENST00000467323 TXNDC2Q86VQ3 553 aa7.04□□□□□ -1.28
MSH2-205ENST00000467323 ARID4AP29374 1257 aaPredicted RBP7.03□□□□□ -1.28
MSH2-205ENST00000467323 GCGRP47871 477 aa7.03□□□□□ -1.28
MSH2-205ENST00000467323 TBC1D9Q6ZT07 1266 aa7.03□□□□□ -1.28
MSH2-205ENST00000467323 LRRN4Q8WUT4 740 aa7.03□□□□□ -1.28
MSH2-205ENST00000467323 MRRFQ96E11 262 aaKnown RBP7.03□□□□□ -1.28
MSH2-205ENST00000467323 SIRT1Q96EB6 747 aa7.03□□□□□ -1.28
MSH2-205ENST00000467323 FAM198AQ9UFP1 575 aa7.03□□□□□ -1.28
MSH2-205ENST00000467323 SLF2Q8IX21 1173 aa7.02□□□□□ -1.29
MSH2-205ENST00000467323 PNMA3Q9UL41 463 aa7.02□□□□□ -1.29
MSH2-205ENST00000467323 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
MSH2-205ENST00000467323 TMEM164Q5U3C3 297 aa7.01□□□□□ -1.29
MSH2-205ENST00000467323 PACS2Q86VP3 889 aa7.01□□□□□ -1.29
MSH2-205ENST00000467323 TATDN2Q93075 761 aa7.01□□□□□ -1.29
MSH2-205ENST00000467323 PCDHGC3Q9UN70 934 aa7.01□□□□□ -1.29
MSH2-205ENST00000467323 COLQQ9Y215 455 aaPredicted RBP7.01□□□□□ -1.29
MSH2-205ENST00000467323 DNAJC14Q6Y2X3 702 aaPredicted RBP7□□□□□ -1.29
MSH2-205ENST00000467323 NFATC2IPQ8NCF5 419 aa7□□□□□ -1.29
MSH2-205ENST00000467323 KIAA1522Q9P206 1035 aaPredicted RBP7□□□□□ -1.29
MSH2-205ENST00000467323 TSKSQ9UJT2 592 aa7□□□□□ -1.29
MSH2-205ENST00000467323 NOVA2Q9UNW9 492 aaKnown RBP7□□□□□ -1.29
MSH2-205ENST00000467323 GRIPAP1Q4V328 841 aa6.99□□□□□ -1.29
MSH2-205ENST00000467323 BCL2L13Q9BXK5 485 aa6.99□□□□□ -1.29
MSH2-205ENST00000467323 ZMIZ1Q9ULJ6 1067 aa6.99□□□□□ -1.29
MSH2-205ENST00000467323 PPP1R3GB7ZBB8 358 aa6.98□□□□□ -1.29
MSH2-205ENST00000467323 C6orf229H3BNL8 230 aa6.98□□□□□ -1.29
MSH2-205ENST00000467323 ZNF16P17020 682 aaPredicted RBP6.98□□□□□ -1.29
MSH2-205ENST00000467323 EPS8L1Q8TE68 723 aa6.98□□□□□ -1.29
MSH2-205ENST00000467323 STK32AQ8WU08 396 aa6.98□□□□□ -1.29
MSH2-205ENST00000467323 SOWAHDA6NJG2 315 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 FAM196BA6NMK8 535 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 CFAP99D6REC4 459 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 COL9A1P20849 921 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 SSFA2P28290 1259 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 GUCA2AQ02747 115 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 NR1H3Q13133 447 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 NR6A1Q15406 480 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 PHLDB3Q6NSJ2 640 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 SLC39A7Q92504 469 aa6.97□□□□□ -1.29
MSH2-205ENST00000467323 USP17L3A6NCW0 530 aa6.96□□□□□ -1.3
MSH2-205ENST00000467323 USP17L4A6NCW7 530 aa6.96□□□□□ -1.3
MSH2-205ENST00000467323 TRIM6-TRIM34B2RNG4 842 aa6.96□□□□□ -1.3
MSH2-205ENST00000467323 TCF3P15923 654 aa6.96□□□□□ -1.3
MSH2-205ENST00000467323 MARSP56192 900 aaKnown RBP6.96□□□□□ -1.3
MSH2-205ENST00000467323 PPP4R3BQ5MIZ7 849 aa6.96□□□□□ -1.3
MSH2-205ENST00000467323 USP17L2Q6R6M4 530 aa6.96□□□□□ -1.3
MSH2-205ENST00000467323 USP17L1Q7RTZ2 530 aa6.96□□□□□ -1.3
MSH2-205ENST00000467323 PLEKHM2Q8IWE5 1019 aa6.96□□□□□ -1.3
MSH2-205ENST00000467323 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.96□□□□□ -1.3
MSH2-205ENST00000467323 PSDA5PKW4 1024 aaPredicted RBP6.95□□□□□ -1.3
MSH2-205ENST00000467323 NUDT7P0C024 238 aa6.95□□□□□ -1.3
MSH2-205ENST00000467323 PTPREP23469 700 aa6.95□□□□□ -1.3
MSH2-205ENST00000467323 ZNF326Q5BKZ1 582 aaKnown RBP6.95□□□□□ -1.3
MSH2-205ENST00000467323 GIPC2Q8TF65 315 aa6.95□□□□□ -1.3
MSH2-205ENST00000467323 BCL11AQ9H165 835 aa6.95□□□□□ -1.3
MSH2-205ENST00000467323 BCL2L12Q9HB09 334 aa6.95□□□□□ -1.3
MSH2-205ENST00000467323 C7P10643 843 aa6.94□□□□□ -1.3
MSH2-205ENST00000467323 SKIP12755 728 aa6.94□□□□□ -1.3
MSH2-205ENST00000467323 CANXP27824 592 aaKnown RBP6.94□□□□□ -1.3
MSH2-205ENST00000467323 SLC4A3P48751 1232 aa6.94□□□□□ -1.3
MSH2-205ENST00000467323 LARP1Q6PKG0 1096 aaKnown RBP6.94□□□□□ -1.3
MSH2-205ENST00000467323 FAM177A1Q8N128 213 aaPredicted RBP6.94□□□□□ -1.3
MSH2-205ENST00000467323 FAM200AQ8TCP9 573 aa6.94□□□□□ -1.3
MSH2-205ENST00000467323 CLP1Q92989 425 aaKnown RBP6.94□□□□□ -1.3
MSH2-205ENST00000467323 HLA-CQ95604 372 aa6.94□□□□□ -1.3
MSH2-205ENST00000467323 C8orf37Q96NL8 207 aa6.94□□□□□ -1.3
MSH2-205ENST00000467323 USP17L5A8MUK1 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L15C9J2P7 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L10C9JJH3 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L13C9JLJ4 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L12C9JPN9 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L11C9JVI0 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L21D6R901 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L18D6R9N7 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L22D6RA61 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L17D6RBQ6 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L19D6RCP7 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L20D6RJB6 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 C3orf80F5H4A9 247 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 USP17L24Q0WX57 530 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 ZNF592Q92610 1267 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 DRC1Q96MC2 740 aa6.93□□□□□ -1.3
MSH2-205ENST00000467323 CDCA7Q9BWT1 371 aaPredicted RBP6.93□□□□□ -1.3
MSH2-205ENST00000467323 BIN2Q9UBW5 565 aaPredicted RBP6.93□□□□□ -1.3
MSH2-205ENST00000467323 ZBBXA8MT70 800 aa6.92□□□□□ -1.3
MSH2-205ENST00000467323 RIMBP2O15034 1052 aa6.92□□□□□ -1.3
MSH2-205ENST00000467323 VAMP1P23763 118 aa6.92□□□□□ -1.3
MSH2-205ENST00000467323 DOK7Q18PE1 504 aa6.92□□□□□ -1.3
MSH2-205ENST00000467323 ATP5J2-PTCD1G3V325 749 aa6.91□□□□□ -1.3
MSH2-205ENST00000467323 PIK3CDO00329 1044 aa6.91□□□□□ -1.3
MSH2-205ENST00000467323 LZTS3O60299 673 aaPredicted RBP6.91□□□□□ -1.3
MSH2-205ENST00000467323 SLC10A3P09131 477 aa6.91□□□□□ -1.3
MSH2-205ENST00000467323 ATP2B4P23634 1241 aa6.91□□□□□ -1.3
MSH2-205ENST00000467323 HDGFP51858 240 aaKnown RBP6.91□□□□□ -1.3
MSH2-205ENST00000467323 CCDC125Q86Z20 511 aa6.91□□□□□ -1.3
MSH2-205ENST00000467323 SREK1Q8WXA9 508 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms