RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 ADAMTS2O95450 1211 aa13.55□□□□□ -0.24
PTPDC1-203ENST00000467049 PPARGC1BQ86YN6 1023 aaKnown RBP13.55□□□□□ -0.24
PTPDC1-203ENST00000467049 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
PTPDC1-203ENST00000467049 ATRNO75882 1429 aa13.54□□□□□ -0.24
PTPDC1-203ENST00000467049 MYOM2P54296 1465 aa13.54□□□□□ -0.24
PTPDC1-203ENST00000467049 TRPC5Q9UL62 973 aaPredicted RBP13.54□□□□□ -0.24
PTPDC1-203ENST00000467049 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.54□□□□□ -0.24
PTPDC1-203ENST00000467049 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
PTPDC1-203ENST00000467049 USP21Q9UK80 565 aa13.53□□□□□ -0.24
PTPDC1-203ENST00000467049 PXDNQ92626 1479 aa13.53□□□□□ -0.24
PTPDC1-203ENST00000467049 TECPR2O15040 1411 aa13.52□□□□□ -0.25
PTPDC1-203ENST00000467049 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
PTPDC1-203ENST00000467049 FMN2Q9NZ56 1722 aa13.51□□□□□ -0.25
PTPDC1-203ENST00000467049 KIF1AQ12756 1690 aa13.51□□□□□ -0.25
PTPDC1-203ENST00000467049 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
PTPDC1-203ENST00000467049 LRPPRCP42704 1394 aaKnown RBP13.49□□□□□ -0.25
PTPDC1-203ENST00000467049 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
PTPDC1-203ENST00000467049 SPATA31E1Q6ZUB1 1445 aa13.48□□□□□ -0.25
PTPDC1-203ENST00000467049 ANKRD30BQ9BXX2 1392 aa13.47□□□□□ -0.25
PTPDC1-203ENST00000467049 FOXD1Q16676 465 aa13.47□□□□□ -0.25
PTPDC1-203ENST00000467049 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
PTPDC1-203ENST00000467049 ABCC11Q96J66 1382 aa13.46□□□□□ -0.25
PTPDC1-203ENST00000467049 CCDC144AA2RUR9 1427 aa13.46□□□□□ -0.25
PTPDC1-203ENST00000467049 ADGRF5Q8IZF2 1346 aa13.45□□□□□ -0.26
PTPDC1-203ENST00000467049 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
PTPDC1-203ENST00000467049 USP32Q8NFA0 1604 aa13.45□□□□□ -0.26
PTPDC1-203ENST00000467049 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
PTPDC1-203ENST00000467049 PIK3C2GO75747 1445 aa13.44□□□□□ -0.26
PTPDC1-203ENST00000467049 GLI3P10071 1580 aa13.44□□□□□ -0.26
PTPDC1-203ENST00000467049 SLIT2O94813 1529 aa13.43□□□□□ -0.26
PTPDC1-203ENST00000467049 BRWD3Q6RI45 1802 aa13.43□□□□□ -0.26
PTPDC1-203ENST00000467049 FOXO3O43524 673 aa13.43□□□□□ -0.26
PTPDC1-203ENST00000467049 NWD2Q9ULI1 1742 aa13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 GJD4Q96KN9 370 aaPredicted RBP13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 SPATA31A3Q5VYP0 1347 aa13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 PLEKHH1Q9ULM0 1364 aa13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 SIRT1Q96EB6 747 aa13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 STK26Q9P289 416 aa13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
PTPDC1-203ENST00000467049 PLCH1Q4KWH8 1693 aa13.41□□□□□ -0.26
PTPDC1-203ENST00000467049 XPCQ01831 940 aaPredicted RBP13.41□□□□□ -0.26
PTPDC1-203ENST00000467049 RALGAPBQ86X10 1494 aa13.41□□□□□ -0.26
PTPDC1-203ENST00000467049 UNC5CLQ8IV45 518 aa13.4□□□□□ -0.26
PTPDC1-203ENST00000467049 NRXN1Q9ULB1 1477 aa13.4□□□□□ -0.26
PTPDC1-203ENST00000467049 TNS3Q68CZ2 1445 aa13.39□□□□□ -0.27
PTPDC1-203ENST00000467049 RGL3Q3MIN7 710 aa13.39□□□□□ -0.27
PTPDC1-203ENST00000467049 NUTM2FA1L443 756 aa13.38□□□□□ -0.27
PTPDC1-203ENST00000467049 TMEM132EQ6IEE7 984 aa13.38□□□□□ -0.27
PTPDC1-203ENST00000467049 MPHOSPH9Q99550 1183 aa13.38□□□□□ -0.27
PTPDC1-203ENST00000467049 BLMP54132 1417 aaPredicted RBP13.38□□□□□ -0.27
PTPDC1-203ENST00000467049 KRT28Q7Z3Y7 464 aa13.38□□□□□ -0.27
PTPDC1-203ENST00000467049 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
PTPDC1-203ENST00000467049 ACIN1Q9UKV3 1341 aaKnown RBP13.37□□□□□ -0.27
PTPDC1-203ENST00000467049 DLC1Q96QB1 1528 aa13.37□□□□□ -0.27
PTPDC1-203ENST00000467049 C14orf93Q9H972 538 aaKnown RBP13.36□□□□□ -0.27
PTPDC1-203ENST00000467049 ADGRB2O60241 1585 aa13.36□□□□□ -0.27
PTPDC1-203ENST00000467049 PSME1Q06323 249 aa13.36□□□□□ -0.27
PTPDC1-203ENST00000467049 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
PTPDC1-203ENST00000467049 NRAPQ86VF7 1730 aa13.35□□□□□ -0.27
PTPDC1-203ENST00000467049 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
PTPDC1-203ENST00000467049 TRPM3Q9HCF6 1732 aaPredicted RBP13.34□□□□□ -0.27
PTPDC1-203ENST00000467049 ANKARQ7Z5J8 1434 aa13.34□□□□□ -0.27
PTPDC1-203ENST00000467049 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
PTPDC1-203ENST00000467049 VPS72Q15906 364 aa13.34□□□□□ -0.27
PTPDC1-203ENST00000467049 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
PTPDC1-203ENST00000467049 LRP5O75197 1615 aa13.32□□□□□ -0.28
PTPDC1-203ENST00000467049 ONECUT3O60422 494 aaPredicted RBP13.31□□□□□ -0.28
PTPDC1-203ENST00000467049 HAP1P54257 671 aaPredicted RBP13.31□□□□□ -0.28
PTPDC1-203ENST00000467049 SEPT12Q8IYM1 358 aa13.31□□□□□ -0.28
PTPDC1-203ENST00000467049 COL14A1Q05707 1796 aaKnown RBP13.31□□□□□ -0.28
PTPDC1-203ENST00000467049 CRYBG1Q9Y4K1 1723 aa13.3□□□□□ -0.28
PTPDC1-203ENST00000467049 CFAP70Q5T0N1 1121 aa13.3□□□□□ -0.28
PTPDC1-203ENST00000467049 ADGRB1O14514 1584 aa13.3□□□□□ -0.28
PTPDC1-203ENST00000467049 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
PTPDC1-203ENST00000467049 EIF3AQ14152 1382 aaKnown RBP13.29□□□□□ -0.28
PTPDC1-203ENST00000467049 RGPD1P0DJD0 1748 aa13.29□□□□□ -0.28
PTPDC1-203ENST00000467049 CABLES1Q8TDN4 633 aa13.29□□□□□ -0.28
PTPDC1-203ENST00000467049 PRAM1Q96QH2 718 aa13.29□□□□□ -0.28
PTPDC1-203ENST00000467049 EP400Q96L91 3159 aa13.28□□□□□ -0.28
PTPDC1-203ENST00000467049 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
PTPDC1-203ENST00000467049 ITSN1Q15811 1721 aa13.27□□□□□ -0.28
PTPDC1-203ENST00000467049 KRT27Q7Z3Y8 459 aa13.27□□□□□ -0.28
PTPDC1-203ENST00000467049 DEFB132Q7Z7B7 95 aa13.27□□□□□ -0.28
PTPDC1-203ENST00000467049 POGKQ9P215 609 aa13.27□□□□□ -0.29
PTPDC1-203ENST00000467049 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
PTPDC1-203ENST00000467049 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
PTPDC1-203ENST00000467049 SAFB2Q14151 953 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTPDC1-203ENST00000467049 LMOD2Q6P5Q4 547 aa13.25□□□□□ -0.29
PTPDC1-203ENST00000467049 THSD7AQ9UPZ6 1657 aa13.25□□□□□ -0.29
PTPDC1-203ENST00000467049 GPRASP1Q5JY77 1395 aa13.25□□□□□ -0.29
PTPDC1-203ENST00000467049 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
PTPDC1-203ENST00000467049 ARHGEF28Q8N1W1 1705 aaKnown RBP13.24□□□□□ -0.29
PTPDC1-203ENST00000467049 TNS1Q9HBL0 1735 aaKnown RBP13.24□□□□□ -0.29
PTPDC1-203ENST00000467049 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
PTPDC1-203ENST00000467049 BAG6P46379 1132 aa13.23□□□□□ -0.29
PTPDC1-203ENST00000467049 PRR36Q9H6K5 1346 aa13.22□□□□□ -0.29
PTPDC1-203ENST00000467049 PHRF1Q9P1Y6 1649 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms