RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 TMF1P82094 1093 aa15□□□□□ -0.01
NUP188-204ENST00000467044 C14orf37Q86TY3 774 aa15□□□□□ -0.01
NUP188-204ENST00000467044 STRCP1A6NGW2 1772 aa15□□□□□ -0.01
NUP188-204ENST00000467044 EVC2Q86UK5 1308 aa14.97□□□□□ -0.01
NUP188-204ENST00000467044 NKTRP30414 1462 aaKnown RBP14.97□□□□□ -0.01
NUP188-204ENST00000467044 C11orf95C9JLR9 678 aaPredicted RBP14.97□□□□□ -0.01
NUP188-204ENST00000467044 SBNO2Q9Y2G9 1366 aa14.97□□□□□ -0.01
NUP188-204ENST00000467044 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.96□□□□□ -0.01
NUP188-204ENST00000467044 DISP3Q9P2K9 1392 aa14.96□□□□□ -0.02
NUP188-204ENST00000467044 SRPK2P78362 688 aaKnown RBP14.95□□□□□ -0.02
NUP188-204ENST00000467044 CDCA8Q53HL2 280 aa14.95□□□□□ -0.02
NUP188-204ENST00000467044 CDK19Q9BWU1 502 aa14.95□□□□□ -0.02
NUP188-204ENST00000467044 TMEM94Q12767 1356 aa14.95□□□□□ -0.02
NUP188-204ENST00000467044 WASLO00401 505 aaPredicted RBP14.94□□□□□ -0.02
NUP188-204ENST00000467044 CABP2Q9NPB3 220 aa14.94□□□□□ -0.02
NUP188-204ENST00000467044 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
NUP188-204ENST00000467044 WASHC2AQ641Q2 1341 aa14.92□□□□□ -0.02
NUP188-204ENST00000467044 NUTM2FA1L443 756 aa14.92□□□□□ -0.02
NUP188-204ENST00000467044 CCDC7Q96M83 1385 aa14.92□□□□□ -0.02
NUP188-204ENST00000467044 LRRC7Q96NW7 1537 aa14.92□□□□□ -0.02
NUP188-204ENST00000467044 TULP4Q9NRJ4 1543 aa14.92□□□□□ -0.02
NUP188-204ENST00000467044 NALCNQ8IZF0 1738 aa14.91□□□□□ -0.02
NUP188-204ENST00000467044 ADGRL3Q9HAR2 1447 aa14.91□□□□□ -0.02
NUP188-204ENST00000467044 C19orf44Q9H6X5 657 aa14.9□□□□□ -0.02
NUP188-204ENST00000467044 NCOA3Q9Y6Q9 1424 aa14.9□□□□□ -0.02
NUP188-204ENST00000467044 TMC1Q8TDI8 760 aa14.89□□□□□ -0.03
NUP188-204ENST00000467044 XIRP1Q702N8 1843 aaKnown RBP14.89□□□□□ -0.03
NUP188-204ENST00000467044 ADGRB2O60241 1585 aa14.89□□□□□ -0.03
NUP188-204ENST00000467044 MSH6P52701 1360 aa14.88□□□□□ -0.03
NUP188-204ENST00000467044 ATF3P18847 181 aa14.88□□□□□ -0.03
NUP188-204ENST00000467044 DDX10Q13206 875 aaKnown RBP14.88□□□□□ -0.03
NUP188-204ENST00000467044 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
NUP188-204ENST00000467044 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
NUP188-204ENST00000467044 PUS7Q96PZ0 661 aaKnown RBP14.87□□□□□ -0.03
NUP188-204ENST00000467044 ATAD2Q6PL18 1390 aa14.85□□□□□ -0.03
NUP188-204ENST00000467044 CDC42BPGQ6DT37 1551 aa14.85□□□□□ -0.03
NUP188-204ENST00000467044 FMN2Q9NZ56 1722 aa14.85□□□□□ -0.03
NUP188-204ENST00000467044 CADPS2Q86UW7 1296 aa14.84□□□□□ -0.03
NUP188-204ENST00000467044 SLC12A5Q9H2X9 1139 aa14.84□□□□□ -0.03
NUP188-204ENST00000467044 CABP1Q9NZU7 370 aa14.84□□□□□ -0.03
NUP188-204ENST00000467044 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
NUP188-204ENST00000467044 PRR36Q9H6K5 1346 aa14.84□□□□□ -0.03
NUP188-204ENST00000467044 RGPD8O14715 1765 aaPredicted RBP14.83□□□□□ -0.03
NUP188-204ENST00000467044 DCCP43146 1447 aa14.82□□□□□ -0.04
NUP188-204ENST00000467044 PPIP5K1Q6PFW1 1433 aa14.82□□□□□ -0.04
NUP188-204ENST00000467044 ATP7BP35670 1465 aa14.82□□□□□ -0.04
NUP188-204ENST00000467044 ESCO1Q5FWF5 840 aa14.81□□□□□ -0.04
NUP188-204ENST00000467044 PMFBP1Q8TBY8 1022 aa14.81□□□□□ -0.04
NUP188-204ENST00000467044 PANK3Q9H999 370 aa14.81□□□□□ -0.04
NUP188-204ENST00000467044 ANKARQ7Z5J8 1434 aa14.81□□□□□ -0.04
NUP188-204ENST00000467044 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
NUP188-204ENST00000467044 MYOM1P52179 1685 aa14.8□□□□□ -0.04
NUP188-204ENST00000467044 ITSN1Q15811 1721 aa14.79□□□□□ -0.04
NUP188-204ENST00000467044 HDGFL2Q7Z4V5 671 aaPredicted RBP14.79□□□□□ -0.04
NUP188-204ENST00000467044 ORAI2Q96SN7 254 aa14.79□□□□□ -0.04
NUP188-204ENST00000467044 TERF2IPQ9NYB0 399 aa14.79□□□□□ -0.04
NUP188-204ENST00000467044 NINLQ9Y2I6 1382 aa14.79□□□□□ -0.04
NUP188-204ENST00000467044 C1orf167Q5SNV9 1468 aa14.78□□□□□ -0.04
NUP188-204ENST00000467044 MST1RQ04912 1400 aa14.78□□□□□ -0.04
NUP188-204ENST00000467044 NGDNQ8NEJ9 315 aaKnown RBP14.78□□□□□ -0.04
NUP188-204ENST00000467044 SLAIN2Q9P270 581 aa14.78□□□□□ -0.04
NUP188-204ENST00000467044 PHF8Q9UPP1 1060 aa14.78□□□□□ -0.04
NUP188-204ENST00000467044 PLEKHG3A1L390 1219 aa14.77□□□□□ -0.05
NUP188-204ENST00000467044 CERKQ8TCT0 537 aa14.77□□□□□ -0.05
NUP188-204ENST00000467044 TOPAZ1Q8N9V7 1692 aa14.77□□□□□ -0.05
NUP188-204ENST00000467044 ACEP12821 1306 aa14.76□□□□□ -0.05
NUP188-204ENST00000467044 ANKRD36BQ8N2N9 1353 aa14.75□□□□□ -0.05
NUP188-204ENST00000467044 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
NUP188-204ENST00000467044 DIEXFQ68CQ4 756 aaKnown RBP14.75□□□□□ -0.05
NUP188-204ENST00000467044 A0A1W2PP64 1363 aa14.74□□□□□ -0.05
NUP188-204ENST00000467044 TOM1O60784 492 aa14.74□□□□□ -0.05
NUP188-204ENST00000467044 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
NUP188-204ENST00000467044 CARD14Q9BXL6 1004 aa14.74□□□□□ -0.05
NUP188-204ENST00000467044 KNSTRNQ9Y448 316 aa14.74□□□□□ -0.05
NUP188-204ENST00000467044 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
NUP188-204ENST00000467044 UBAP1LF5GYI3 381 aa14.73□□□□□ -0.05
NUP188-204ENST00000467044 FOXO3O43524 673 aa14.73□□□□□ -0.05
NUP188-204ENST00000467044 PSME1Q06323 249 aa14.73□□□□□ -0.05
NUP188-204ENST00000467044 CD163L1Q9NR16 1453 aa14.72□□□□□ -0.05
NUP188-204ENST00000467044 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
NUP188-204ENST00000467044 AKAP12Q02952 1782 aa14.71□□□□□ -0.05
NUP188-204ENST00000467044 PER1O15534 1290 aaPredicted RBP14.71□□□□□ -0.05
NUP188-204ENST00000467044 PIP4K2BP78356 416 aa14.71□□□□□ -0.05
NUP188-204ENST00000467044 BRINP3Q76B58 766 aa14.71□□□□□ -0.05
NUP188-204ENST00000467044 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.71□□□□□ -0.05
NUP188-204ENST00000467044 CPSF1Q10570 1443 aaKnown RBP14.71□□□□□ -0.05
NUP188-204ENST00000467044 NSD3Q9BZ95 1437 aa14.71□□□□□ -0.05
NUP188-204ENST00000467044 POLR3AO14802 1390 aaPredicted RBP14.71□□□□□ -0.06
NUP188-204ENST00000467044 IQSEC2Q5JU85 1478 aa14.7□□□□□ -0.06
NUP188-204ENST00000467044 XPCQ01831 940 aaPredicted RBP14.7□□□□□ -0.06
NUP188-204ENST00000467044 DDX17Q92841 729 aaKnown RBP14.7□□□□□ -0.06
NUP188-204ENST00000467044 KIF1AQ12756 1690 aa14.7□□□□□ -0.06
NUP188-204ENST00000467044 PAK3O75914 559 aaPredicted RBP14.69□□□□□ -0.06
NUP188-204ENST00000467044 KRT28Q7Z3Y7 464 aa14.69□□□□□ -0.06
NUP188-204ENST00000467044 USP6P35125 1406 aa14.68□□□□□ -0.06
NUP188-204ENST00000467044 CC2D1BQ5T0F9 858 aaKnown RBP14.68□□□□□ -0.06
NUP188-204ENST00000467044 MON2Q7Z3U7 1717 aa14.68□□□□□ -0.06
NUP188-204ENST00000467044 CGNL1Q0VF96 1302 aa14.67□□□□□ -0.06
NUP188-204ENST00000467044 NPHP3Q7Z494 1330 aa14.67□□□□□ -0.06
NUP188-204ENST00000467044 TTC21BQ7Z4L5 1316 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms