RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 SIRT1Q96EB6 747 aa18.7■□□□□ 0.58
PDCD11-202ENST00000466959 ROBO2Q9HCK4 1378 aa18.69■□□□□ 0.58
PDCD11-202ENST00000466959 HSPA5P11021 654 aaKnown RBP18.68■□□□□ 0.58
PDCD11-202ENST00000466959 RGS17Q9UGC6 210 aaPredicted RBP18.67■□□□□ 0.58
PDCD11-202ENST00000466959 CENPJQ9HC77 1338 aaPredicted RBP18.67■□□□□ 0.58
PDCD11-202ENST00000466959 PRAM1Q96QH2 718 aa18.66■□□□□ 0.58
PDCD11-202ENST00000466959 ST20-MTHFSA0A0A6YYL1 179 aa18.65■□□□□ 0.58
PDCD11-202ENST00000466959 POGKQ9P215 609 aa18.65■□□□□ 0.58
PDCD11-202ENST00000466959 PLEKHH1Q9ULM0 1364 aa18.65■□□□□ 0.58
PDCD11-202ENST00000466959 SBNO2Q9Y2G9 1366 aa18.64■□□□□ 0.57
PDCD11-202ENST00000466959 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.63■□□□□ 0.57
PDCD11-202ENST00000466959 WAPLQ7Z5K2 1190 aa18.63■□□□□ 0.57
PDCD11-202ENST00000466959 ADGRB2O60241 1585 aa18.62■□□□□ 0.57
PDCD11-202ENST00000466959 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
PDCD11-202ENST00000466959 XIRP1Q702N8 1843 aaKnown RBP18.61■□□□□ 0.57
PDCD11-202ENST00000466959 SAFB2Q14151 953 aaKnown RBP eCLIP18.6■□□□□ 0.57
PDCD11-202ENST00000466959 PROSER2Q86WR7 435 aaPredicted RBP18.6■□□□□ 0.57
PDCD11-202ENST00000466959 TESK2Q96S53 571 aa18.6■□□□□ 0.57
PDCD11-202ENST00000466959 NCOA3Q9Y6Q9 1424 aa18.59■□□□□ 0.57
PDCD11-202ENST00000466959 POTEAQ6S8J7 498 aa18.59■□□□□ 0.57
PDCD11-202ENST00000466959 HIRIP3Q9BW71 556 aaPredicted RBP18.59■□□□□ 0.57
PDCD11-202ENST00000466959 TULP4Q9NRJ4 1543 aa18.58■□□□□ 0.56
PDCD11-202ENST00000466959 ADGRL3Q9HAR2 1447 aa18.57■□□□□ 0.56
PDCD11-202ENST00000466959 MINK1Q8N4C8 1332 aaPredicted RBP18.57■□□□□ 0.56
PDCD11-202ENST00000466959 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
PDCD11-202ENST00000466959 TMEM94Q12767 1356 aa18.56■□□□□ 0.56
PDCD11-202ENST00000466959 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
PDCD11-202ENST00000466959 TMF1P82094 1093 aa18.54■□□□□ 0.56
PDCD11-202ENST00000466959 RBM33Q96EV2 1170 aaKnown RBP18.53■□□□□ 0.56
PDCD11-202ENST00000466959 FMN2Q9NZ56 1722 aa18.53■□□□□ 0.56
PDCD11-202ENST00000466959 EVC2Q86UK5 1308 aa18.52■□□□□ 0.56
PDCD11-202ENST00000466959 DCCP43146 1447 aa18.51■□□□□ 0.55
PDCD11-202ENST00000466959 C14orf37Q86TY3 774 aa18.51■□□□□ 0.55
PDCD11-202ENST00000466959 WASLO00401 505 aaPredicted RBP18.5■□□□□ 0.55
PDCD11-202ENST00000466959 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
PDCD11-202ENST00000466959 CDCA8Q53HL2 280 aa18.49■□□□□ 0.55
PDCD11-202ENST00000466959 MSH6P52701 1360 aa18.49■□□□□ 0.55
PDCD11-202ENST00000466959 C11orf95C9JLR9 678 aaPredicted RBP18.48■□□□□ 0.55
PDCD11-202ENST00000466959 PUS7Q96PZ0 661 aaKnown RBP18.48■□□□□ 0.55
PDCD11-202ENST00000466959 CDK19Q9BWU1 502 aa18.48■□□□□ 0.55
PDCD11-202ENST00000466959 C19orf44Q9H6X5 657 aa18.48■□□□□ 0.55
PDCD11-202ENST00000466959 CCDC7Q96M83 1385 aa18.47■□□□□ 0.55
PDCD11-202ENST00000466959 USP32Q8NFA0 1604 aa18.47■□□□□ 0.55
PDCD11-202ENST00000466959 ROBO1Q9Y6N7 1651 aa18.47■□□□□ 0.55
PDCD11-202ENST00000466959 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
PDCD11-202ENST00000466959 ITSN1Q15811 1721 aa18.46■□□□□ 0.55
PDCD11-202ENST00000466959 JCADQ9P266 1359 aa18.46■□□□□ 0.55
PDCD11-202ENST00000466959 MYOM1P52179 1685 aa18.46■□□□□ 0.55
PDCD11-202ENST00000466959 TOPAZ1Q8N9V7 1692 aa18.46■□□□□ 0.55
PDCD11-202ENST00000466959 ANKARQ7Z5J8 1434 aa18.46■□□□□ 0.55
PDCD11-202ENST00000466959 ATP7BP35670 1465 aa18.46■□□□□ 0.54
PDCD11-202ENST00000466959 RGPD8O14715 1765 aaPredicted RBP18.45■□□□□ 0.54
PDCD11-202ENST00000466959 SRPK2P78362 688 aaKnown RBP18.45■□□□□ 0.54
PDCD11-202ENST00000466959 WASHC2AQ641Q2 1341 aa18.45■□□□□ 0.54
PDCD11-202ENST00000466959 ATAD2Q6PL18 1390 aa18.44■□□□□ 0.54
PDCD11-202ENST00000466959 MEX3CQ5U5Q3 659 aaKnown RBP18.44■□□□□ 0.54
PDCD11-202ENST00000466959 CABP2Q9NPB3 220 aa18.44■□□□□ 0.54
PDCD11-202ENST00000466959 ATF3P18847 181 aa18.43■□□□□ 0.54
PDCD11-202ENST00000466959 CADPS2Q86UW7 1296 aa18.42■□□□□ 0.54
PDCD11-202ENST00000466959 MST1RQ04912 1400 aa18.41■□□□□ 0.54
PDCD11-202ENST00000466959 ZNF772Q68DY9 489 aaPredicted RBP18.41■□□□□ 0.54
PDCD11-202ENST00000466959 NUDT16Q96DE0 195 aaKnown RBP18.41■□□□□ 0.54
PDCD11-202ENST00000466959 SLAIN2Q9P270 581 aa18.41■□□□□ 0.54
PDCD11-202ENST00000466959 PRR36Q9H6K5 1346 aa18.41■□□□□ 0.54
PDCD11-202ENST00000466959 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
PDCD11-202ENST00000466959 NINLQ9Y2I6 1382 aa18.4■□□□□ 0.54
PDCD11-202ENST00000466959 C1orf167Q5SNV9 1468 aa18.39■□□□□ 0.53
PDCD11-202ENST00000466959 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
PDCD11-202ENST00000466959 PPIP5K1Q6PFW1 1433 aa18.38■□□□□ 0.53
PDCD11-202ENST00000466959 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
PDCD11-202ENST00000466959 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
PDCD11-202ENST00000466959 UPF1Q92900 1129 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDCD11-202ENST00000466959 CCDC61Q9Y6R9 512 aa18.37■□□□□ 0.53
PDCD11-202ENST00000466959 SPATA31A6Q5VVP1 1343 aa18.37■□□□□ 0.53
PDCD11-202ENST00000466959 AKAP12Q02952 1782 aa18.36■□□□□ 0.53
PDCD11-202ENST00000466959 TMC1Q8TDI8 760 aa18.34■□□□□ 0.53
PDCD11-202ENST00000466959 PLEKHG3A1L390 1219 aa18.33■□□□□ 0.52
PDCD11-202ENST00000466959 SLC12A5Q9H2X9 1139 aa18.33■□□□□ 0.52
PDCD11-202ENST00000466959 CABP1Q9NZU7 370 aa18.33■□□□□ 0.52
PDCD11-202ENST00000466959 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
PDCD11-202ENST00000466959 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
PDCD11-202ENST00000466959 ANKRD36BQ8N2N9 1353 aa18.31■□□□□ 0.52
PDCD11-202ENST00000466959 RXRBP28702 533 aa18.31■□□□□ 0.52
PDCD11-202ENST00000466959 ESCO1Q5FWF5 840 aa18.31■□□□□ 0.52
PDCD11-202ENST00000466959 PHF8Q9UPP1 1060 aa18.31■□□□□ 0.52
PDCD11-202ENST00000466959 POLR3AO14802 1390 aaPredicted RBP18.3■□□□□ 0.52
PDCD11-202ENST00000466959 ORAI2Q96SN7 254 aa18.3■□□□□ 0.52
PDCD11-202ENST00000466959 CPSF1Q10570 1443 aaKnown RBP18.3■□□□□ 0.52
PDCD11-202ENST00000466959 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
PDCD11-202ENST00000466959 A0A1W2PP64 1363 aa18.29■□□□□ 0.52
PDCD11-202ENST00000466959 ACEP12821 1306 aa18.28■□□□□ 0.52
PDCD11-202ENST00000466959 DDX10Q13206 875 aaKnown RBP18.28■□□□□ 0.52
PDCD11-202ENST00000466959 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
PDCD11-202ENST00000466959 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
PDCD11-202ENST00000466959 NRKQ7Z2Y5 1582 aa18.28■□□□□ 0.52
PDCD11-202ENST00000466959 LRP6O75581 1613 aa18.27■□□□□ 0.52
PDCD11-202ENST00000466959 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.52
PDCD11-202ENST00000466959 NHSL1Q5SYE7 1610 aa18.27■□□□□ 0.52
PDCD11-202ENST00000466959 BRINP3Q76B58 766 aa18.27■□□□□ 0.52
PDCD11-202ENST00000466959 NGDNQ8NEJ9 315 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms