RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 MAP4K4O95819 1239 aaPredicted RBP5.91□□□□□ -1.46
CLCA3P-202ENST00000466454 KIF12Q96FN5 646 aa5.91□□□□□ -1.46
CLCA3P-202ENST00000466454 DNMT1P26358 1616 aaKnown RBP5.91□□□□□ -1.46
CLCA3P-202ENST00000466454 KLHL42Q9P2K6 505 aa5.91□□□□□ -1.46
CLCA3P-202ENST00000466454 TCF3P15923 654 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 VTI1AQ96AJ9 217 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 C8orf37Q96NL8 207 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 RPS6KL1Q9Y6S9 549 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 IQGAP2Q13576 1575 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 PPFIA4O75335 1185 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 MCCP23508 829 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 ERICH6BQ5W0A0 696 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 DDRGK1Q96HY6 314 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 TERF2IPQ9NYB0 399 aa5.9□□□□□ -1.46
CLCA3P-202ENST00000466454 PDS5BQ9NTI5 1447 aa5.9□□□□□ -1.47
CLCA3P-202ENST00000466454 CROCC2H7BZ55 1655 aa5.9□□□□□ -1.47
CLCA3P-202ENST00000466454 ADGBQ8N7X0 1667 aa5.9□□□□□ -1.47
CLCA3P-202ENST00000466454 PEX14O75381 377 aa5.9□□□□□ -1.47
CLCA3P-202ENST00000466454 PTMSP20962 102 aa5.9□□□□□ -1.47
CLCA3P-202ENST00000466454 GOPCQ9HD26 462 aa5.9□□□□□ -1.47
CLCA3P-202ENST00000466454 PATL2C9JE40 543 aaKnown RBP5.89□□□□□ -1.47
CLCA3P-202ENST00000466454 PARP9Q8IXQ6 854 aa5.89□□□□□ -1.47
CLCA3P-202ENST00000466454 COG6Q9Y2V7 657 aa5.89□□□□□ -1.47
CLCA3P-202ENST00000466454 GPIHBP1Q8IV16 184 aa5.89□□□□□ -1.47
CLCA3P-202ENST00000466454 RBM46Q8TBY0 533 aaKnown RBP5.89□□□□□ -1.47
CLCA3P-202ENST00000466454 OS9Q13438 667 aaPredicted RBP5.89□□□□□ -1.47
CLCA3P-202ENST00000466454 DNAJC14Q6Y2X3 702 aaPredicted RBP5.89□□□□□ -1.47
CLCA3P-202ENST00000466454 EPRSP07814 1512 aaKnown RBP5.88□□□□□ -1.47
CLCA3P-202ENST00000466454 ADGRL2O95490 1459 aa5.88□□□□□ -1.47
CLCA3P-202ENST00000466454 PARNO95453 639 aaKnown RBP5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 ZNF16P17020 682 aaPredicted RBP5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 GORABQ5T7V8 394 aa5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 PIP4P2Q8N4L2 257 aa5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 PPP1R1BQ9UD71 204 aaPredicted RBP5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 ITSN2Q9NZM3 1697 aa5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 UBXN4Q92575 508 aa5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 NAP1L2Q9ULW6 460 aaPredicted RBP5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 MBD5Q9P267 1494 aa5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 SPATA31E1Q6ZUB1 1445 aa5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 KIAA0556O60303 1618 aa5.87□□□□□ -1.47
CLCA3P-202ENST00000466454 KDM5DQ9BY66 1539 aa5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 RALBP1Q15311 655 aa5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 YTHDC1Q96MU7 727 aaKnown RBP5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 RPRD2Q5VT52 1461 aaKnown RBP5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 TEX14Q8IWB6 1497 aa5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 GPR37O15354 613 aa5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 TBC1D12O60347 775 aa5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 ZRANB1Q9UGI0 708 aa5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 NCOA1Q15788 1441 aa5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 KDM6BO15054 1643 aa5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 TSR1Q2NL82 804 aaKnown RBP5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 MS4A3Q96HJ5 214 aa5.86□□□□□ -1.47
CLCA3P-202ENST00000466454 DPYSL4O14531 572 aa5.85□□□□□ -1.47
CLCA3P-202ENST00000466454 SRPK2P78362 688 aaKnown RBP5.85□□□□□ -1.47
CLCA3P-202ENST00000466454 FOXD4Q12950 439 aaPredicted RBP5.85□□□□□ -1.47
CLCA3P-202ENST00000466454 EMILIN3Q9NT22 766 aa5.85□□□□□ -1.47
CLCA3P-202ENST00000466454 MCCD1P59942 119 aaPredicted RBP5.85□□□□□ -1.47
CLCA3P-202ENST00000466454 DPH6Q7L8W6 267 aa5.85□□□□□ -1.47
CLCA3P-202ENST00000466454 SBNO2Q9Y2G9 1366 aa5.85□□□□□ -1.47
CLCA3P-202ENST00000466454 RAPGEF6Q8TEU7 1601 aa5.84□□□□□ -1.47
CLCA3P-202ENST00000466454 TMEM106CQ9BVX2 250 aa5.84□□□□□ -1.47
CLCA3P-202ENST00000466454 MTUS2Q5JR59 1369 aa5.84□□□□□ -1.47
CLCA3P-202ENST00000466454 KIAA0586Q9BVV6 1533 aa5.84□□□□□ -1.47
CLCA3P-202ENST00000466454 LARGE2Q8N3Y3 721 aa5.84□□□□□ -1.47
CLCA3P-202ENST00000466454 ZNF579Q8NAF0 562 aaKnown RBP5.84□□□□□ -1.47
CLCA3P-202ENST00000466454 DISP1Q96F81 1524 aa5.84□□□□□ -1.47
CLCA3P-202ENST00000466454 CHRDL2Q6WN34 429 aa5.84□□□□□ -1.48
CLCA3P-202ENST00000466454 ZNF330Q9Y3S2 320 aaPredicted RBP5.84□□□□□ -1.48
CLCA3P-202ENST00000466454 CNTLNQ9NXG0 1405 aa5.84□□□□□ -1.48
CLCA3P-202ENST00000466454 IFT140Q96RY7 1462 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 MRC2Q9UBG0 1479 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 TONSLQ96HA7 1378 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 PMM1Q92871 262 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 KIF14Q15058 1648 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 SHANK2Q9UPX8 1470 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 ANKRD30BQ9BXX2 1392 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 CD44P16070 742 aaKnown RBP5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 FXR2P51116 673 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 PSME1Q06323 249 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 MAMSTRQ6ZN01 415 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 SIN3AQ96ST3 1273 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 USTQ9Y2C2 406 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 POM121CA8CG34 1229 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 CRISPLD2Q9H0B8 497 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 RYDENQ9NUL5 291 aaKnown RBP5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 DAPK1P53355 1430 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 UHRF1BP1Q6BDS2 1440 aa5.83□□□□□ -1.48
CLCA3P-202ENST00000466454 LAMC1P11047 1609 aa5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 E9PCH4 1651 aa5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 EVX2Q03828 476 aa5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 OXER1Q8TDS5 423 aa5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 DDX27Q96GQ7 796 aaKnown RBP5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 ARHGEF12Q9NZN5 1544 aa5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 FECHP22830 423 aa5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 ZC3H6P61129 1189 aaKnown RBP5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 NAALADL2Q58DX5 795 aa5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 ZMYM4Q5VZL5 1548 aa5.82□□□□□ -1.48
CLCA3P-202ENST00000466454 ANP32CO43423 234 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms