RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 NUP155O75694 1391 aa14.26□□□□□ -0.13
ABCF3-205ENST00000466416 ESCO1Q5FWF5 840 aa14.26□□□□□ -0.13
ABCF3-205ENST00000466416 SEPT12Q8IYM1 358 aa14.26□□□□□ -0.13
ABCF3-205ENST00000466416 BAG6P46379 1132 aa14.25□□□□□ -0.13
ABCF3-205ENST00000466416 IQGAP3Q86VI3 1631 aa14.25□□□□□ -0.13
ABCF3-205ENST00000466416 LRPPRCP42704 1394 aaKnown RBP14.24□□□□□ -0.13
ABCF3-205ENST00000466416 PSDA5PKW4 1024 aaPredicted RBP14.24□□□□□ -0.13
ABCF3-205ENST00000466416 ONECUT3O60422 494 aaPredicted RBP14.24□□□□□ -0.13
ABCF3-205ENST00000466416 ROBO2Q9HCK4 1378 aa14.23□□□□□ -0.13
ABCF3-205ENST00000466416 FOXO3O43524 673 aa14.23□□□□□ -0.13
ABCF3-205ENST00000466416 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
ABCF3-205ENST00000466416 SLIT2O94813 1529 aa14.23□□□□□ -0.13
ABCF3-205ENST00000466416 LOC105371045A0A1W2PR82 267 aa14.22□□□□□ -0.13
ABCF3-205ENST00000466416 VPS72Q15906 364 aa14.22□□□□□ -0.13
ABCF3-205ENST00000466416 HFM1A2PYH4 1435 aa14.22□□□□□ -0.13
ABCF3-205ENST00000466416 GLI3P10071 1580 aa14.22□□□□□ -0.13
ABCF3-205ENST00000466416 SPHKAPQ2M3C7 1700 aa14.21□□□□□ -0.13
ABCF3-205ENST00000466416 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.21□□□□□ -0.13
ABCF3-205ENST00000466416 PXDNQ92626 1479 aa14.21□□□□□ -0.13
ABCF3-205ENST00000466416 VGFO15240 615 aaPredicted RBP14.21□□□□□ -0.13
ABCF3-205ENST00000466416 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.14
ABCF3-205ENST00000466416 ROCK1Q13464 1354 aa14.21□□□□□ -0.14
ABCF3-205ENST00000466416 XPCQ01831 940 aaPredicted RBP14.2□□□□□ -0.14
ABCF3-205ENST00000466416 PRAG1Q86YV5 1406 aa14.2□□□□□ -0.14
ABCF3-205ENST00000466416 YY1P25490 414 aa14.18□□□□□ -0.14
ABCF3-205ENST00000466416 SPATA31A3Q5VYP0 1347 aa14.17□□□□□ -0.14
ABCF3-205ENST00000466416 NEXMIFQ5QGS0 1516 aa14.17□□□□□ -0.14
ABCF3-205ENST00000466416 CCDC9Q9Y3X0 531 aaKnown RBP14.17□□□□□ -0.14
ABCF3-205ENST00000466416 BRWD3Q6RI45 1802 aa14.16□□□□□ -0.14
ABCF3-205ENST00000466416 HAP1P54257 671 aaPredicted RBP14.15□□□□□ -0.14
ABCF3-205ENST00000466416 EN1Q05925 392 aaPredicted RBP14.15□□□□□ -0.14
ABCF3-205ENST00000466416 R3HDM1Q15032 1099 aaKnown RBP14.15□□□□□ -0.14
ABCF3-205ENST00000466416 RPGRIP1LQ68CZ1 1315 aa14.15□□□□□ -0.15
ABCF3-205ENST00000466416 KRT28Q7Z3Y7 464 aa14.13□□□□□ -0.15
ABCF3-205ENST00000466416 CDC42BPGQ6DT37 1551 aa14.13□□□□□ -0.15
ABCF3-205ENST00000466416 A0A0G2JS52 829 aa14.12□□□□□ -0.15
ABCF3-205ENST00000466416 MYT1Q01538 1121 aa14.12□□□□□ -0.15
ABCF3-205ENST00000466416 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
ABCF3-205ENST00000466416 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
ABCF3-205ENST00000466416 PSME1Q06323 249 aa14.11□□□□□ -0.15
ABCF3-205ENST00000466416 NAIPQ13075 1403 aa14.1□□□□□ -0.15
ABCF3-205ENST00000466416 USP32Q8NFA0 1604 aa14.1□□□□□ -0.15
ABCF3-205ENST00000466416 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
ABCF3-205ENST00000466416 FAM98CQ17RN3 349 aaKnown RBP14.09□□□□□ -0.15
ABCF3-205ENST00000466416 CABLES1Q8TDN4 633 aa14.09□□□□□ -0.15
ABCF3-205ENST00000466416 DISP2A7MBM2 1401 aa14.08□□□□□ -0.15
ABCF3-205ENST00000466416 FAM83GA6ND36 823 aa14.08□□□□□ -0.16
ABCF3-205ENST00000466416 CLTCL1P53675 1640 aa14.08□□□□□ -0.16
ABCF3-205ENST00000466416 EZH2Q15910 746 aaKnown RBP14.07□□□□□ -0.16
ABCF3-205ENST00000466416 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
ABCF3-205ENST00000466416 NWD2Q9ULI1 1742 aa14.07□□□□□ -0.16
ABCF3-205ENST00000466416 TNS3Q68CZ2 1445 aa14.07□□□□□ -0.16
ABCF3-205ENST00000466416 CAMKK2Q96RR4 588 aa14.06□□□□□ -0.16
ABCF3-205ENST00000466416 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
ABCF3-205ENST00000466416 KIF1BO60333 1816 aa14.05□□□□□ -0.16
ABCF3-205ENST00000466416 SBNO1A3KN83 1393 aa14.05□□□□□ -0.16
ABCF3-205ENST00000466416 ARHGEF10O15013 1369 aa14.05□□□□□ -0.16
ABCF3-205ENST00000466416 LMOD2Q6P5Q4 547 aa14.04□□□□□ -0.16
ABCF3-205ENST00000466416 BTG4Q9NY30 223 aa14.04□□□□□ -0.16
ABCF3-205ENST00000466416 STK26Q9P289 416 aa14.04□□□□□ -0.16
ABCF3-205ENST00000466416 ABCC11Q96J66 1382 aa14.04□□□□□ -0.16
ABCF3-205ENST00000466416 TECPR2O15040 1411 aa14.04□□□□□ -0.16
ABCF3-205ENST00000466416 PLEKHG5O94827 1062 aa14.03□□□□□ -0.16
ABCF3-205ENST00000466416 ITGAEP38570 1179 aa14.03□□□□□ -0.16
ABCF3-205ENST00000466416 FAM182BQ5T319 152 aa14.03□□□□□ -0.16
ABCF3-205ENST00000466416 PARD3Q8TEW0 1356 aa14.03□□□□□ -0.16
ABCF3-205ENST00000466416 RGPD1P0DJD0 1748 aa14.03□□□□□ -0.16
ABCF3-205ENST00000466416 KIF1AQ12756 1690 aa14.02□□□□□ -0.16
ABCF3-205ENST00000466416 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.17
ABCF3-205ENST00000466416 PLCH1Q4KWH8 1693 aa14.01□□□□□ -0.17
ABCF3-205ENST00000466416 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
ABCF3-205ENST00000466416 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
ABCF3-205ENST00000466416 NBPF8Q3BBV2 869 aa14.01□□□□□ -0.17
ABCF3-205ENST00000466416 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
ABCF3-205ENST00000466416 SIRT1Q96EB6 747 aa14.01□□□□□ -0.17
ABCF3-205ENST00000466416 PPP1R1BQ9UD71 204 aaPredicted RBP14.01□□□□□ -0.17
ABCF3-205ENST00000466416 TRIM37O94972 964 aa14□□□□□ -0.17
ABCF3-205ENST00000466416 APBA3O96018 575 aa14□□□□□ -0.17
ABCF3-205ENST00000466416 SPON1Q9HCB6 807 aa14□□□□□ -0.17
ABCF3-205ENST00000466416 PLEKHH1Q9ULM0 1364 aa13.99□□□□□ -0.17
ABCF3-205ENST00000466416 NINLQ9Y2I6 1382 aa13.98□□□□□ -0.17
ABCF3-205ENST00000466416 ADGRF5Q8IZF2 1346 aa13.97□□□□□ -0.17
ABCF3-205ENST00000466416 KCNQ2O43526 872 aa13.97□□□□□ -0.17
ABCF3-205ENST00000466416 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
ABCF3-205ENST00000466416 FMN2Q9NZ56 1722 aa13.97□□□□□ -0.17
ABCF3-205ENST00000466416 ADGRB2O60241 1585 aa13.96□□□□□ -0.17
ABCF3-205ENST00000466416 NRXN1Q9ULB1 1477 aa13.96□□□□□ -0.17
ABCF3-205ENST00000466416 IFFO2Q5TF58 517 aa13.96□□□□□ -0.17
ABCF3-205ENST00000466416 PPLO60437 1756 aa13.95□□□□□ -0.18
ABCF3-205ENST00000466416 NRAPQ86VF7 1730 aa13.94□□□□□ -0.18
ABCF3-205ENST00000466416 TNS1Q9HBL0 1735 aaKnown RBP13.94□□□□□ -0.18
ABCF3-205ENST00000466416 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
ABCF3-205ENST00000466416 ANKRD30BQ9BXX2 1392 aa13.94□□□□□ -0.18
ABCF3-205ENST00000466416 SPATA31A1Q5TZJ5 1347 aa13.93□□□□□ -0.18
ABCF3-205ENST00000466416 YTHDC2Q9H6S0 1430 aaKnown RBP13.93□□□□□ -0.18
ABCF3-205ENST00000466416 ZNF784Q8NCA9 323 aaPredicted RBP13.93□□□□□ -0.18
ABCF3-205ENST00000466416 COL14A1Q05707 1796 aaKnown RBP13.93□□□□□ -0.18
ABCF3-205ENST00000466416 THSD7AQ9UPZ6 1657 aa13.92□□□□□ -0.18
ABCF3-205ENST00000466416 PMFBP1Q8TBY8 1022 aa13.92□□□□□ -0.18
ABCF3-205ENST00000466416 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms