RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TULP4Q9NRJ4 1543 aa16.75■□□□□ 0.27
VPS16-206ENST00000466415 WAPLQ7Z5K2 1190 aa16.75■□□□□ 0.27
VPS16-206ENST00000466415 ROBO2Q9HCK4 1378 aa16.75■□□□□ 0.27
VPS16-206ENST00000466415 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
VPS16-206ENST00000466415 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
VPS16-206ENST00000466415 NWD1Q149M9 1564 aa16.7■□□□□ 0.26
VPS16-206ENST00000466415 ANP32CO43423 234 aa16.7■□□□□ 0.26
VPS16-206ENST00000466415 KCNA6P17658 529 aa16.7■□□□□ 0.26
VPS16-206ENST00000466415 MYOM1P52179 1685 aa16.69■□□□□ 0.26
VPS16-206ENST00000466415 ADGRB2O60241 1585 aa16.69■□□□□ 0.26
VPS16-206ENST00000466415 ATAD2Q6PL18 1390 aa16.69■□□□□ 0.26
VPS16-206ENST00000466415 PUS7Q96PZ0 661 aaKnown RBP16.69■□□□□ 0.26
VPS16-206ENST00000466415 CABP2Q9NPB3 220 aa16.68■□□□□ 0.26
VPS16-206ENST00000466415 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
VPS16-206ENST00000466415 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
VPS16-206ENST00000466415 STRCQ7RTU9 1775 aa16.66■□□□□ 0.26
VPS16-206ENST00000466415 NINLQ9Y2I6 1382 aa16.66■□□□□ 0.26
VPS16-206ENST00000466415 NKTRP30414 1462 aaKnown RBP16.66■□□□□ 0.26
VPS16-206ENST00000466415 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.65■□□□□ 0.26
VPS16-206ENST00000466415 WASLO00401 505 aaPredicted RBP16.65■□□□□ 0.26
VPS16-206ENST00000466415 PANK3Q9H999 370 aa16.65■□□□□ 0.26
VPS16-206ENST00000466415 MIER1Q8N108 512 aa16.64■□□□□ 0.25
VPS16-206ENST00000466415 C14orf37Q86TY3 774 aa16.62■□□□□ 0.25
VPS16-206ENST00000466415 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
VPS16-206ENST00000466415 NALCNQ8IZF0 1738 aa16.6■□□□□ 0.25
VPS16-206ENST00000466415 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
VPS16-206ENST00000466415 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
VPS16-206ENST00000466415 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
VPS16-206ENST00000466415 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
VPS16-206ENST00000466415 CNGB1Q14028 1251 aaPredicted RBP16.59■□□□□ 0.25
VPS16-206ENST00000466415 SLC12A5Q9H2X9 1139 aa16.59■□□□□ 0.25
VPS16-206ENST00000466415 ANKRD36BQ8N2N9 1353 aa16.59■□□□□ 0.25
VPS16-206ENST00000466415 ATP7BP35670 1465 aa16.59■□□□□ 0.25
VPS16-206ENST00000466415 HDGFL2Q7Z4V5 671 aaPredicted RBP16.58■□□□□ 0.24
VPS16-206ENST00000466415 NUDT16Q96DE0 195 aaKnown RBP16.58■□□□□ 0.24
VPS16-206ENST00000466415 TERF2IPQ9NYB0 399 aa16.58■□□□□ 0.24
VPS16-206ENST00000466415 KTN1Q86UP2 1357 aaKnown RBP16.58■□□□□ 0.24
VPS16-206ENST00000466415 PPIP5K1Q6PFW1 1433 aa16.58■□□□□ 0.24
VPS16-206ENST00000466415 NSD3Q9BZ95 1437 aa16.56■□□□□ 0.24
VPS16-206ENST00000466415 ITSN1Q15811 1721 aa16.56■□□□□ 0.24
VPS16-206ENST00000466415 FMN2Q9NZ56 1722 aa16.56■□□□□ 0.24
VPS16-206ENST00000466415 ANKARQ7Z5J8 1434 aa16.55■□□□□ 0.24
VPS16-206ENST00000466415 A0A1W2PP64 1363 aa16.55■□□□□ 0.24
VPS16-206ENST00000466415 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
VPS16-206ENST00000466415 PRKRIP1Q9H875 184 aaPredicted RBP16.55■□□□□ 0.24
VPS16-206ENST00000466415 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
VPS16-206ENST00000466415 CCDC61Q9Y6R9 512 aa16.55■□□□□ 0.24
VPS16-206ENST00000466415 STRCP1A6NGW2 1772 aa16.55■□□□□ 0.24
VPS16-206ENST00000466415 TOPAZ1Q8N9V7 1692 aa16.55■□□□□ 0.24
VPS16-206ENST00000466415 NUTM2FA1L443 756 aa16.54■□□□□ 0.24
VPS16-206ENST00000466415 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
VPS16-206ENST00000466415 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
VPS16-206ENST00000466415 NCOA3Q9Y6Q9 1424 aa16.53■□□□□ 0.24
VPS16-206ENST00000466415 TMEM94Q12767 1356 aa16.53■□□□□ 0.24
VPS16-206ENST00000466415 PRR36Q9H6K5 1346 aa16.53■□□□□ 0.24
VPS16-206ENST00000466415 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
VPS16-206ENST00000466415 USP32Q8NFA0 1604 aa16.52■□□□□ 0.24
VPS16-206ENST00000466415 ZNF335Q9H4Z2 1342 aaPredicted RBP16.52■□□□□ 0.24
VPS16-206ENST00000466415 RALBP1Q15311 655 aa16.52■□□□□ 0.24
VPS16-206ENST00000466415 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
VPS16-206ENST00000466415 CD163L1Q9NR16 1453 aa16.51■□□□□ 0.23
VPS16-206ENST00000466415 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
VPS16-206ENST00000466415 NPC1L1Q9UHC9 1359 aa16.51■□□□□ 0.23
VPS16-206ENST00000466415 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
VPS16-206ENST00000466415 DCCP43146 1447 aa16.49■□□□□ 0.23
VPS16-206ENST00000466415 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
VPS16-206ENST00000466415 NSD2O96028 1365 aa16.49■□□□□ 0.23
VPS16-206ENST00000466415 MSH6P52701 1360 aa16.49■□□□□ 0.23
VPS16-206ENST00000466415 PARD3Q8TEW0 1356 aa16.49■□□□□ 0.23
VPS16-206ENST00000466415 ATF3P18847 181 aa16.48■□□□□ 0.23
VPS16-206ENST00000466415 C19orf44Q9H6X5 657 aa16.48■□□□□ 0.23
VPS16-206ENST00000466415 LRRC7Q96NW7 1537 aa16.48■□□□□ 0.23
VPS16-206ENST00000466415 MYBBP1AQ9BQG0 1328 aaKnown RBP16.47■□□□□ 0.23
VPS16-206ENST00000466415 CPSF1Q10570 1443 aaKnown RBP16.47■□□□□ 0.23
VPS16-206ENST00000466415 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
VPS16-206ENST00000466415 AKAP12Q02952 1782 aa16.47■□□□□ 0.23
VPS16-206ENST00000466415 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
VPS16-206ENST00000466415 MON2Q7Z3U7 1717 aa16.46■□□□□ 0.23
VPS16-206ENST00000466415 NGDNQ8NEJ9 315 aaKnown RBP16.46■□□□□ 0.23
VPS16-206ENST00000466415 ZNF692Q9BU19 519 aaPredicted RBP16.46■□□□□ 0.23
VPS16-206ENST00000466415 ACEP12821 1306 aa16.45■□□□□ 0.22
VPS16-206ENST00000466415 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
VPS16-206ENST00000466415 CADPS2Q86UW7 1296 aa16.44■□□□□ 0.22
VPS16-206ENST00000466415 KIF20BQ96Q89 1820 aa16.44■□□□□ 0.22
VPS16-206ENST00000466415 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
VPS16-206ENST00000466415 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
VPS16-206ENST00000466415 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
VPS16-206ENST00000466415 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
VPS16-206ENST00000466415 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
VPS16-206ENST00000466415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.42■□□□□ 0.22
VPS16-206ENST00000466415 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
VPS16-206ENST00000466415 USP6P35125 1406 aa16.42■□□□□ 0.22
VPS16-206ENST00000466415 NRKQ7Z2Y5 1582 aa16.42■□□□□ 0.22
VPS16-206ENST00000466415 C1orf167Q5SNV9 1468 aa16.42■□□□□ 0.22
VPS16-206ENST00000466415 KIF1AQ12756 1690 aa16.41■□□□□ 0.22
VPS16-206ENST00000466415 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
VPS16-206ENST00000466415 NLRP13Q86W25 1043 aa16.41■□□□□ 0.22
VPS16-206ENST00000466415 MST1RQ04912 1400 aa16.41■□□□□ 0.22
VPS16-206ENST00000466415 ANKRD26Q9UPS8 1709 aa16.41■□□□□ 0.22
VPS16-206ENST00000466415 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms