RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 NLRP7Q8WX94 980 aa6.4□□□□□ -1.38
CCDC93-205ENST00000466171 SALL2Q9Y467 1007 aaPredicted RBP6.4□□□□□ -1.38
CCDC93-205ENST00000466171 FOXC1Q12948 553 aa6.39□□□□□ -1.39
CCDC93-205ENST00000466171 SLC27A5Q9Y2P5 690 aa6.39□□□□□ -1.39
CCDC93-205ENST00000466171 FCF1Q9Y324 198 aaKnown RBP6.39□□□□□ -1.39
CCDC93-205ENST00000466171 SNRPBP14678 240 aaKnown RBP6.38□□□□□ -1.39
CCDC93-205ENST00000466171 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
CCDC93-205ENST00000466171 Q3C1V9 767 aa6.38□□□□□ -1.39
CCDC93-205ENST00000466171 THAP11Q96EK4 314 aa6.38□□□□□ -1.39
CCDC93-205ENST00000466171 TOR4AQ9NXH8 423 aa6.38□□□□□ -1.39
CCDC93-205ENST00000466171 MAP2K5Q13163 448 aa6.37□□□□□ -1.39
CCDC93-205ENST00000466171 CTC1Q2NKJ3 1217 aa6.37□□□□□ -1.39
CCDC93-205ENST00000466171 MSS51Q4VC12 460 aa6.37□□□□□ -1.39
CCDC93-205ENST00000466171 BRICD5Q6PL45 260 aa6.37□□□□□ -1.39
CCDC93-205ENST00000466171 FAM181BA6NEQ2 426 aa6.36□□□□□ -1.39
CCDC93-205ENST00000466171 VSIG10Q8N0Z9 540 aa6.36□□□□□ -1.39
CCDC93-205ENST00000466171 CYP4X1Q8N118 509 aa6.36□□□□□ -1.39
CCDC93-205ENST00000466171 FAM160A2Q8N612 972 aaPredicted RBP6.36□□□□□ -1.39
CCDC93-205ENST00000466171 PHOX2BQ99453 314 aa6.36□□□□□ -1.39
CCDC93-205ENST00000466171 KDM2AQ9Y2K7 1162 aa6.35□□□□□ -1.39
CCDC93-205ENST00000466171 MINK1Q8N4C8 1332 aaPredicted RBP6.34□□□□□ -1.39
CCDC93-205ENST00000466171 KDM4AO75164 1064 aa6.34□□□□□ -1.39
CCDC93-205ENST00000466171 CD46P15529 392 aa6.34□□□□□ -1.39
CCDC93-205ENST00000466171 USP46P62068 366 aa6.34□□□□□ -1.39
CCDC93-205ENST00000466171 IRF6O14896 467 aa6.33□□□□□ -1.4
CCDC93-205ENST00000466171 RNF19BQ6ZMZ0 732 aa6.33□□□□□ -1.4
CCDC93-205ENST00000466171 KRI1Q8N9T8 703 aaKnown RBP6.33□□□□□ -1.4
CCDC93-205ENST00000466171 PRDM9Q9NQV7 894 aa6.33□□□□□ -1.4
CCDC93-205ENST00000466171 TTC24A2A3L6 582 aaPredicted RBP6.32□□□□□ -1.4
CCDC93-205ENST00000466171 MDM2Q00987 491 aaPredicted RBP6.32□□□□□ -1.4
CCDC93-205ENST00000466171 ZSCAN1Q8NBB4 408 aa6.32□□□□□ -1.4
CCDC93-205ENST00000466171 TRIM47Q96LD4 638 aa6.32□□□□□ -1.4
CCDC93-205ENST00000466171 USB1Q9BQ65 265 aaKnown RBP6.32□□□□□ -1.4
CCDC93-205ENST00000466171 ATP13A2Q9NQ11 1180 aa6.32□□□□□ -1.4
CCDC93-205ENST00000466171 CLCN1P35523 988 aa6.3□□□□□ -1.4
CCDC93-205ENST00000466171 GMPRP36959 345 aa6.3□□□□□ -1.4
CCDC93-205ENST00000466171 MMP16P51512 607 aa6.3□□□□□ -1.4
CCDC93-205ENST00000466171 WNT7AO00755 349 aa6.29□□□□□ -1.4
CCDC93-205ENST00000466171 TRIM32Q13049 653 aa6.29□□□□□ -1.4
CCDC93-205ENST00000466171 NUTM1Q86Y26 1132 aa6.29□□□□□ -1.4
CCDC93-205ENST00000466171 CCDC102AQ96A19 550 aa6.29□□□□□ -1.4
CCDC93-205ENST00000466171 REPIN1Q9BWE0 567 aaKnown RBP6.29□□□□□ -1.4
CCDC93-205ENST00000466171 GPCPD1Q9NPB8 672 aa6.29□□□□□ -1.4
CCDC93-205ENST00000466171 CCDC24Q8N4L8 307 aa6.28□□□□□ -1.4
CCDC93-205ENST00000466171 SNIP1Q8TAD8 396 aaKnown RBP6.28□□□□□ -1.4
CCDC93-205ENST00000466171 HOXA2O43364 376 aa6.27□□□□□ -1.41
CCDC93-205ENST00000466171 DXOO77932 396 aaKnown RBP6.27□□□□□ -1.41
CCDC93-205ENST00000466171 SENP2Q9HC62 589 aa6.26□□□□□ -1.41
CCDC93-205ENST00000466171 FAM217BQ9NTX9 383 aaPredicted RBP6.25□□□□□ -1.41
CCDC93-205ENST00000466171 SMPD1P17405 629 aa6.24□□□□□ -1.41
CCDC93-205ENST00000466171 JUNDP17535 347 aa6.24□□□□□ -1.41
CCDC93-205ENST00000466171 WNT7BP56706 349 aa6.24□□□□□ -1.41
CCDC93-205ENST00000466171 RETREG3Q86VR2 466 aa6.24□□□□□ -1.41
CCDC93-205ENST00000466171 MRGPRX2Q96LB1 330 aa6.24□□□□□ -1.41
CCDC93-205ENST00000466171 GSK3AP49840 483 aa6.23□□□□□ -1.41
CCDC93-205ENST00000466171 KCTD17Q8N5Z5 321 aa6.23□□□□□ -1.41
CCDC93-205ENST00000466171 SLC16A10Q8TF71 515 aa6.23□□□□□ -1.41
CCDC93-205ENST00000466171 HLA-CQ95604 372 aa6.23□□□□□ -1.41
CCDC93-205ENST00000466171 C6orf229H3BNL8 230 aa6.22□□□□□ -1.41
CCDC93-205ENST00000466171 FDX1P10109 184 aa6.22□□□□□ -1.41
CCDC93-205ENST00000466171 GUCA2AQ02747 115 aa6.22□□□□□ -1.41
CCDC93-205ENST00000466171 RC3H1Q5TC82 1133 aaKnown RBP6.22□□□□□ -1.41
CCDC93-205ENST00000466171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.22□□□□□ -1.41
CCDC93-205ENST00000466171 KIFC2Q96AC6 838 aa6.22□□□□□ -1.41
CCDC93-205ENST00000466171 NUDT12Q9BQG2 462 aa6.22□□□□□ -1.41
CCDC93-205ENST00000466171 NXF1Q9UBU9 619 aaKnown RBP6.22□□□□□ -1.41
CCDC93-205ENST00000466171 ERBB4Q15303 1308 aa6.22□□□□□ -1.41
CCDC93-205ENST00000466171 J3QL48 77 aa6.2□□□□□ -1.42
CCDC93-205ENST00000466171 SSTR3P32745 418 aaPredicted RBP6.2□□□□□ -1.42
CCDC93-205ENST00000466171 VEGFBP49765 207 aa6.2□□□□□ -1.42
CCDC93-205ENST00000466171 TTLL12Q14166 644 aaPredicted RBP6.2□□□□□ -1.42
CCDC93-205ENST00000466171 SYMPKQ92797 1274 aaKnown RBP6.2□□□□□ -1.42
CCDC93-205ENST00000466171 IRF7Q92985 503 aa6.2□□□□□ -1.42
CCDC93-205ENST00000466171 MS4A1P11836 297 aa6.19□□□□□ -1.42
CCDC93-205ENST00000466171 EHBP1Q8NDI1 1231 aa6.19□□□□□ -1.42
CCDC93-205ENST00000466171 ALDH1A1P00352 501 aa6.18□□□□□ -1.42
CCDC93-205ENST00000466171 SKOR1P84550 965 aa6.18□□□□□ -1.42
CCDC93-205ENST00000466171 KCNMA1Q12791 1236 aa6.18□□□□□ -1.42
CCDC93-205ENST00000466171 DIXDC1Q155Q3 683 aa6.18□□□□□ -1.42
CCDC93-205ENST00000466171 SPDYE5A6NIY4 337 aa6.17□□□□□ -1.42
CCDC93-205ENST00000466171 H3BM21 787 aa6.17□□□□□ -1.42
CCDC93-205ENST00000466171 CCNYL3P0C7X3 344 aa6.17□□□□□ -1.42
CCDC93-205ENST00000466171 BARGINQ6ZT62 677 aa6.17□□□□□ -1.42
CCDC93-205ENST00000466171 SPIRE2Q8WWL2 714 aa6.17□□□□□ -1.42
CCDC93-205ENST00000466171 HPS1Q92902 700 aa6.17□□□□□ -1.42
CCDC93-205ENST00000466171 WASF2Q9Y6W5 498 aa6.17□□□□□ -1.42
CCDC93-205ENST00000466171 PTPRNQ16849 979 aa6.16□□□□□ -1.42
CCDC93-205ENST00000466171 NPAS3Q8IXF0 933 aa6.16□□□□□ -1.42
CCDC93-205ENST00000466171 ZMYND10O75800 440 aa6.15□□□□□ -1.42
CCDC93-205ENST00000466171 MTMR2Q13614 643 aa6.15□□□□□ -1.42
CCDC93-205ENST00000466171 AMHR2Q16671 573 aa6.15□□□□□ -1.42
CCDC93-205ENST00000466171 XP32Q5T750 250 aa6.15□□□□□ -1.42
CCDC93-205ENST00000466171 PCDHGC3Q9UN70 934 aa6.15□□□□□ -1.42
CCDC93-205ENST00000466171 PLEKHG3A1L390 1219 aa6.14□□□□□ -1.43
CCDC93-205ENST00000466171 MOXD2PA6NHM9 499 aa6.14□□□□□ -1.43
CCDC93-205ENST00000466171 NDUFV2P19404 249 aa6.14□□□□□ -1.43
CCDC93-205ENST00000466171 PTCRAQ6ISU1 281 aaPredicted RBP6.14□□□□□ -1.43
CCDC93-205ENST00000466171 GIGYF2Q6Y7W6 1299 aaKnown RBP6.14□□□□□ -1.43
CCDC93-205ENST00000466171 PRR7Q8TB68 274 aa6.14□□□□□ -1.43
CCDC93-205ENST00000466171 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms