RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 BOLA1Q9Y3E2 137 aa14.38□□□□□ -0.11
ATG3-203ENST00000465980 IQSEC2Q5JU85 1478 aa14.38□□□□□ -0.11
ATG3-203ENST00000465980 KANK1Q14678 1352 aa14.37□□□□□ -0.11
ATG3-203ENST00000465980 ANKLE2Q86XL3 938 aa14.37□□□□□ -0.11
ATG3-203ENST00000465980 PPARGC1BQ86YN6 1023 aaKnown RBP14.37□□□□□ -0.11
ATG3-203ENST00000465980 THEMISQ8N1K5 641 aaPredicted RBP14.37□□□□□ -0.11
ATG3-203ENST00000465980 ADGRL2O95490 1459 aa14.37□□□□□ -0.11
ATG3-203ENST00000465980 PIK3C2BO00750 1634 aa14.37□□□□□ -0.11
ATG3-203ENST00000465980 NPHP4O75161 1426 aaPredicted RBP14.35□□□□□ -0.11
ATG3-203ENST00000465980 VWDEQ8N2E2 1590 aa14.34□□□□□ -0.11
ATG3-203ENST00000465980 ARHGAP31Q2M1Z3 1444 aa14.34□□□□□ -0.11
ATG3-203ENST00000465980 STRCP1A6NGW2 1772 aa14.33□□□□□ -0.12
ATG3-203ENST00000465980 EFCAB6Q5THR3 1501 aa14.33□□□□□ -0.12
ATG3-203ENST00000465980 MED14O60244 1454 aa14.32□□□□□ -0.12
ATG3-203ENST00000465980 MYO5BQ9ULV0 1848 aa14.32□□□□□ -0.12
ATG3-203ENST00000465980 SYNMO15061 1565 aa14.32□□□□□ -0.12
ATG3-203ENST00000465980 UBAP1LF5GYI3 381 aa14.32□□□□□ -0.12
ATG3-203ENST00000465980 MARVELD3Q96A59 401 aa14.32□□□□□ -0.12
ATG3-203ENST00000465980 ANKRD50Q9ULJ7 1429 aa14.32□□□□□ -0.12
ATG3-203ENST00000465980 LMTK2Q8IWU2 1503 aa14.31□□□□□ -0.12
ATG3-203ENST00000465980 EFCAB3Q8N7B9 438 aa14.31□□□□□ -0.12
ATG3-203ENST00000465980 CPS1P31327 1500 aa14.31□□□□□ -0.12
ATG3-203ENST00000465980 RIOK3O14730 519 aaKnown RBP14.3□□□□□ -0.12
ATG3-203ENST00000465980 SCAF11Q99590 1463 aaKnown RBP14.3□□□□□ -0.12
ATG3-203ENST00000465980 TET3O43151 1660 aa14.3□□□□□ -0.12
ATG3-203ENST00000465980 GCC2Q8IWJ2 1684 aa14.3□□□□□ -0.12
ATG3-203ENST00000465980 ITGAEP38570 1179 aa14.29□□□□□ -0.12
ATG3-203ENST00000465980 UNC13BO14795 1591 aa14.29□□□□□ -0.12
ATG3-203ENST00000465980 SLIT1O75093 1534 aa14.28□□□□□ -0.12
ATG3-203ENST00000465980 KDM5AP29375 1690 aaKnown RBP14.27□□□□□ -0.12
ATG3-203ENST00000465980 ARHGAP23Q9P227 1491 aa14.27□□□□□ -0.12
ATG3-203ENST00000465980 EMP3P54852 163 aa14.27□□□□□ -0.13
ATG3-203ENST00000465980 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
ATG3-203ENST00000465980 TRIM26Q12899 539 aaPredicted RBP14.26□□□□□ -0.13
ATG3-203ENST00000465980 ADGRB3O60242 1522 aa14.25□□□□□ -0.13
ATG3-203ENST00000465980 LTKP29376 864 aa14.25□□□□□ -0.13
ATG3-203ENST00000465980 TXNDC2Q86VQ3 553 aa14.25□□□□□ -0.13
ATG3-203ENST00000465980 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
ATG3-203ENST00000465980 E9PCH4 1651 aa14.25□□□□□ -0.13
ATG3-203ENST00000465980 NOS1P29475 1434 aa14.24□□□□□ -0.13
ATG3-203ENST00000465980 SOX12O15370 315 aa14.24□□□□□ -0.13
ATG3-203ENST00000465980 IDI1Q13907 227 aa14.24□□□□□ -0.13
ATG3-203ENST00000465980 IQGAP3Q86VI3 1631 aa14.23□□□□□ -0.13
ATG3-203ENST00000465980 XIRP1Q702N8 1843 aaKnown RBP14.23□□□□□ -0.13
ATG3-203ENST00000465980 PIP4K2BP78356 416 aa14.23□□□□□ -0.13
ATG3-203ENST00000465980 EID1Q9Y6B2 187 aa14.23□□□□□ -0.13
ATG3-203ENST00000465980 ROCK1Q13464 1354 aa14.22□□□□□ -0.13
ATG3-203ENST00000465980 DISP3Q9P2K9 1392 aa14.22□□□□□ -0.13
ATG3-203ENST00000465980 TMEM2Q9UHN6 1383 aa14.22□□□□□ -0.13
ATG3-203ENST00000465980 RPRD2Q5VT52 1461 aaKnown RBP14.22□□□□□ -0.13
ATG3-203ENST00000465980 LRRC7Q96NW7 1537 aa14.21□□□□□ -0.13
ATG3-203ENST00000465980 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.13
ATG3-203ENST00000465980 ZFP91Q96JP5 570 aaPredicted RBP14.21□□□□□ -0.13
ATG3-203ENST00000465980 ALKQ9UM73 1620 aa14.2□□□□□ -0.14
ATG3-203ENST00000465980 HOXB3P14651 431 aaPredicted RBP14.2□□□□□ -0.14
ATG3-203ENST00000465980 TOM1O60784 492 aa14.19□□□□□ -0.14
ATG3-203ENST00000465980 TMEM131LA2VDJ0 1609 aa14.19□□□□□ -0.14
ATG3-203ENST00000465980 SPNS2Q8IVW8 549 aa14.18□□□□□ -0.14
ATG3-203ENST00000465980 HS3ST6Q96QI5 342 aa14.18□□□□□ -0.14
ATG3-203ENST00000465980 DOK7Q18PE1 504 aa14.17□□□□□ -0.14
ATG3-203ENST00000465980 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
ATG3-203ENST00000465980 TAOK2Q9UL54 1235 aa14.17□□□□□ -0.14
ATG3-203ENST00000465980 SPHKAPQ2M3C7 1700 aa14.17□□□□□ -0.14
ATG3-203ENST00000465980 NUP155O75694 1391 aa14.17□□□□□ -0.14
ATG3-203ENST00000465980 CHGAP10645 457 aaKnown RBP14.16□□□□□ -0.14
ATG3-203ENST00000465980 MICALL2Q8IY33 904 aa14.16□□□□□ -0.14
ATG3-203ENST00000465980 BCANQ96GW7 911 aa14.16□□□□□ -0.14
ATG3-203ENST00000465980 SLC26A8Q96RN1 970 aa14.16□□□□□ -0.14
ATG3-203ENST00000465980 FAM205CA6NFA0 338 aa14.15□□□□□ -0.14
ATG3-203ENST00000465980 HSPA1LP34931 641 aa14.15□□□□□ -0.14
ATG3-203ENST00000465980 MMRN1Q13201 1228 aa14.15□□□□□ -0.14
ATG3-203ENST00000465980 PCGF6Q9BYE7 350 aa14.15□□□□□ -0.14
ATG3-203ENST00000465980 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
ATG3-203ENST00000465980 RIMS2Q9UQ26 1411 aa14.14□□□□□ -0.15
ATG3-203ENST00000465980 PPP1R15AO75807 674 aaPredicted RBP14.13□□□□□ -0.15
ATG3-203ENST00000465980 HOXB1P14653 301 aaPredicted RBP14.13□□□□□ -0.15
ATG3-203ENST00000465980 ZNF710Q8N1W2 664 aa14.13□□□□□ -0.15
ATG3-203ENST00000465980 ZFYVE9O95405 1425 aa14.13□□□□□ -0.15
ATG3-203ENST00000465980 CHD2O14647 1828 aaKnown RBP14.13□□□□□ -0.15
ATG3-203ENST00000465980 POTEB3A0JP26 581 aa14.12□□□□□ -0.15
ATG3-203ENST00000465980 POTEBQ6S5H4 581 aa14.12□□□□□ -0.15
ATG3-203ENST00000465980 ILDR2Q71H61 639 aa14.12□□□□□ -0.15
ATG3-203ENST00000465980 MS4A4AQ96JQ5 239 aa14.12□□□□□ -0.15
ATG3-203ENST00000465980 NWD1Q149M9 1564 aa14.11□□□□□ -0.15
ATG3-203ENST00000465980 RIMBP2O15034 1052 aa14.1□□□□□ -0.15
ATG3-203ENST00000465980 NUTM2DQ5VT03 806 aaPredicted RBP14.1□□□□□ -0.15
ATG3-203ENST00000465980 RBM33Q96EV2 1170 aaKnown RBP14.1□□□□□ -0.15
ATG3-203ENST00000465980 PHF8Q9UPP1 1060 aa14.1□□□□□ -0.15
ATG3-203ENST00000465980 MED1Q15648 1581 aaPredicted RBP14.09□□□□□ -0.15
ATG3-203ENST00000465980 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
ATG3-203ENST00000465980 PLEKHG1Q9ULL1 1385 aa14.09□□□□□ -0.15
ATG3-203ENST00000465980 NAIPQ13075 1403 aa14.08□□□□□ -0.15
ATG3-203ENST00000465980 KCNA6P17658 529 aa14.08□□□□□ -0.16
ATG3-203ENST00000465980 PROSER2Q86WR7 435 aaPredicted RBP14.08□□□□□ -0.16
ATG3-203ENST00000465980 KRTAP3-3Q9BYR6 98 aa14.08□□□□□ -0.16
ATG3-203ENST00000465980 KRTAP3-2Q9BYR7 98 aa14.08□□□□□ -0.16
ATG3-203ENST00000465980 KIF1BO60333 1816 aa14.08□□□□□ -0.16
ATG3-203ENST00000465980 NKTRP30414 1462 aaKnown RBP14.07□□□□□ -0.16
ATG3-203ENST00000465980 CLTCL1P53675 1640 aa14.07□□□□□ -0.16
ATG3-203ENST00000465980 TMEM92Q6UXU6 159 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms