RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
DDR1-242ENST00000465966 RRBP1Q9P2E9 1410 aaKnown RBP12.86□□□□□ -0.35
DDR1-242ENST00000465966 FOXO3O43524 673 aa12.85□□□□□ -0.35
DDR1-242ENST00000465966 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
DDR1-242ENST00000465966 NALCNQ8IZF0 1738 aa12.85□□□□□ -0.35
DDR1-242ENST00000465966 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
DDR1-242ENST00000465966 BCL9LQ86UU0 1499 aa12.84□□□□□ -0.35
DDR1-242ENST00000465966 LAMC1P11047 1609 aa12.84□□□□□ -0.35
DDR1-242ENST00000465966 PRAG1Q86YV5 1406 aa12.83□□□□□ -0.36
DDR1-242ENST00000465966 XPCQ01831 940 aaPredicted RBP12.83□□□□□ -0.36
DDR1-242ENST00000465966 UNC5CLQ8IV45 518 aa12.83□□□□□ -0.36
DDR1-242ENST00000465966 MYOM2P54296 1465 aa12.83□□□□□ -0.36
DDR1-242ENST00000465966 CLTCL1P53675 1640 aa12.82□□□□□ -0.36
DDR1-242ENST00000465966 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
DDR1-242ENST00000465966 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
DDR1-242ENST00000465966 BLMP54132 1417 aaPredicted RBP12.8□□□□□ -0.36
DDR1-242ENST00000465966 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
DDR1-242ENST00000465966 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
DDR1-242ENST00000465966 PXDNQ92626 1479 aa12.79□□□□□ -0.36
DDR1-242ENST00000465966 STK26Q9P289 416 aa12.79□□□□□ -0.36
DDR1-242ENST00000465966 WAPLQ7Z5K2 1190 aa12.78□□□□□ -0.36
DDR1-242ENST00000465966 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
DDR1-242ENST00000465966 NAIPQ13075 1403 aa12.78□□□□□ -0.36
DDR1-242ENST00000465966 PSME1Q06323 249 aa12.77□□□□□ -0.37
DDR1-242ENST00000465966 SEPT12Q8IYM1 358 aa12.77□□□□□ -0.37
DDR1-242ENST00000465966 CCDC9Q9Y3X0 531 aaKnown RBP12.77□□□□□ -0.37
DDR1-242ENST00000465966 SRCAPQ6ZRS2 3230 aa12.77□□□□□ -0.37
DDR1-242ENST00000465966 RALGAPBQ86X10 1494 aa12.77□□□□□ -0.37
DDR1-242ENST00000465966 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.37
DDR1-242ENST00000465966 KRT28Q7Z3Y7 464 aa12.76□□□□□ -0.37
DDR1-242ENST00000465966 DEFB132Q7Z7B7 95 aa12.76□□□□□ -0.37
DDR1-242ENST00000465966 CCDC144AA2RUR9 1427 aa12.75□□□□□ -0.37
DDR1-242ENST00000465966 KIF1BO60333 1816 aa12.75□□□□□ -0.37
DDR1-242ENST00000465966 SLIT2O94813 1529 aa12.75□□□□□ -0.37
DDR1-242ENST00000465966 VPS72Q15906 364 aa12.75□□□□□ -0.37
DDR1-242ENST00000465966 RGL3Q3MIN7 710 aa12.75□□□□□ -0.37
DDR1-242ENST00000465966 ABCC11Q96J66 1382 aa12.74□□□□□ -0.37
DDR1-242ENST00000465966 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
DDR1-242ENST00000465966 KRT27Q7Z3Y8 459 aa12.74□□□□□ -0.37
DDR1-242ENST00000465966 TECPR2O15040 1411 aa12.73□□□□□ -0.37
DDR1-242ENST00000465966 ANKRD30BQ9BXX2 1392 aa12.73□□□□□ -0.37
DDR1-242ENST00000465966 A0A0G2JS52 829 aa12.73□□□□□ -0.37
DDR1-242ENST00000465966 MYT1Q01538 1121 aa12.73□□□□□ -0.37
DDR1-242ENST00000465966 TMEM132EQ6IEE7 984 aa12.73□□□□□ -0.37
DDR1-242ENST00000465966 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
DDR1-242ENST00000465966 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
DDR1-242ENST00000465966 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
DDR1-242ENST00000465966 BAG6P46379 1132 aa12.72□□□□□ -0.37
DDR1-242ENST00000465966 SIRT1Q96EB6 747 aa12.72□□□□□ -0.37
DDR1-242ENST00000465966 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
DDR1-242ENST00000465966 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
DDR1-242ENST00000465966 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
DDR1-242ENST00000465966 TNS3Q68CZ2 1445 aa12.7□□□□□ -0.38
DDR1-242ENST00000465966 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
DDR1-242ENST00000465966 GLI3P10071 1580 aa12.69□□□□□ -0.38
DDR1-242ENST00000465966 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
DDR1-242ENST00000465966 YTHDC2Q9H6S0 1430 aaKnown RBP12.68□□□□□ -0.38
DDR1-242ENST00000465966 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
DDR1-242ENST00000465966 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
DDR1-242ENST00000465966 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
DDR1-242ENST00000465966 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
DDR1-242ENST00000465966 PPLO60437 1756 aa12.66□□□□□ -0.38
DDR1-242ENST00000465966 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
DDR1-242ENST00000465966 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
DDR1-242ENST00000465966 HRCP23327 699 aa12.66□□□□□ -0.38
DDR1-242ENST00000465966 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
DDR1-242ENST00000465966 KIF1AQ12756 1690 aa12.66□□□□□ -0.38
DDR1-242ENST00000465966 EP400Q96L91 3159 aa12.66□□□□□ -0.38
DDR1-242ENST00000465966 PIK3C2GO75747 1445 aa12.65□□□□□ -0.38
DDR1-242ENST00000465966 SPATA31E1Q6ZUB1 1445 aa12.65□□□□□ -0.38
DDR1-242ENST00000465966 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.38
DDR1-242ENST00000465966 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
DDR1-242ENST00000465966 POGKQ9P215 609 aa12.65□□□□□ -0.38
DDR1-242ENST00000465966 SAFB2Q14151 953 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDR1-242ENST00000465966 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
DDR1-242ENST00000465966 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
DDR1-242ENST00000465966 MPHOSPH9Q99550 1183 aa12.64□□□□□ -0.39
DDR1-242ENST00000465966 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
DDR1-242ENST00000465966 NRXN1Q9ULB1 1477 aa12.63□□□□□ -0.39
DDR1-242ENST00000465966 GPRASP1Q5JY77 1395 aa12.62□□□□□ -0.39
DDR1-242ENST00000465966 CFAP70Q5T0N1 1121 aa12.62□□□□□ -0.39
DDR1-242ENST00000465966 LRP5O75197 1615 aa12.62□□□□□ -0.39
DDR1-242ENST00000465966 R3HDM1Q15032 1099 aaKnown RBP12.61□□□□□ -0.39
DDR1-242ENST00000465966 FMN2Q9NZ56 1722 aa12.61□□□□□ -0.39
DDR1-242ENST00000465966 ACIN1Q9UKV3 1341 aaKnown RBP12.61□□□□□ -0.39
DDR1-242ENST00000465966 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
DDR1-242ENST00000465966 KNDC1Q76NI1 1749 aa12.59□□□□□ -0.39
DDR1-242ENST00000465966 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
DDR1-242ENST00000465966 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
DDR1-242ENST00000465966 SPATA31A5Q5VU36 1347 aa12.59□□□□□ -0.39
DDR1-242ENST00000465966 SPATA31A7Q8IWB4 1347 aa12.59□□□□□ -0.39
DDR1-242ENST00000465966 EIF3AQ14152 1382 aaKnown RBP12.58□□□□□ -0.4
DDR1-242ENST00000465966 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
DDR1-242ENST00000465966 FAM182BQ5T319 152 aa12.58□□□□□ -0.4
DDR1-242ENST00000465966 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
DDR1-242ENST00000465966 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
DDR1-242ENST00000465966 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
DDR1-242ENST00000465966 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
DDR1-242ENST00000465966 BRWD3Q6RI45 1802 aa12.57□□□□□ -0.4
DDR1-242ENST00000465966 DISP2A7MBM2 1401 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms