RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 TRPC5Q9UL62 973 aaPredicted RBP11.77□□□□□ -0.52
SCAF11-205ENST00000465950 KANK4Q5T7N3 995 aaPredicted RBP11.77□□□□□ -0.53
SCAF11-205ENST00000465950 PMFBP1Q8TBY8 1022 aa11.77□□□□□ -0.53
SCAF11-205ENST00000465950 LMOD1P29536 600 aaPredicted RBP11.77□□□□□ -0.53
SCAF11-205ENST00000465950 HSPA2P54652 639 aa11.77□□□□□ -0.53
SCAF11-205ENST00000465950 ST5P78524 1137 aa11.77□□□□□ -0.53
SCAF11-205ENST00000465950 CCDC136Q96JN2 1154 aa11.76□□□□□ -0.53
SCAF11-205ENST00000465950 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
SCAF11-205ENST00000465950 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
SCAF11-205ENST00000465950 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-205ENST00000465950 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
SCAF11-205ENST00000465950 ERBINQ96RT1 1412 aa11.75□□□□□ -0.53
SCAF11-205ENST00000465950 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-205ENST00000465950 AKAP17AQ02040 695 aaKnown RBP11.75□□□□□ -0.53
SCAF11-205ENST00000465950 VPS53Q5VIR6 699 aa11.75□□□□□ -0.53
SCAF11-205ENST00000465950 SLF2Q8IX21 1173 aa11.75□□□□□ -0.53
SCAF11-205ENST00000465950 A2MP01023 1474 aa11.74□□□□□ -0.53
SCAF11-205ENST00000465950 CPLX2Q6PUV4 134 aaKnown RBP11.74□□□□□ -0.53
SCAF11-205ENST00000465950 GNAI1P63096 354 aa11.74□□□□□ -0.53
SCAF11-205ENST00000465950 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
SCAF11-205ENST00000465950 YEATS2Q9ULM3 1422 aa11.74□□□□□ -0.53
SCAF11-205ENST00000465950 DDB1Q16531 1140 aa11.73□□□□□ -0.53
SCAF11-205ENST00000465950 TBX22Q9Y458 520 aa11.73□□□□□ -0.53
SCAF11-205ENST00000465950 TOMM22Q9NS69 142 aa11.73□□□□□ -0.53
SCAF11-205ENST00000465950 CHAF1AQ13111 956 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-205ENST00000465950 RPGRQ92834 1020 aaKnown RBP11.73□□□□□ -0.53
SCAF11-205ENST00000465950 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
SCAF11-205ENST00000465950 MAGI2Q86UL8 1455 aa11.73□□□□□ -0.53
SCAF11-205ENST00000465950 GOLGA6L6A8MZA4 724 aa11.73□□□□□ -0.53
SCAF11-205ENST00000465950 RFC4P35249 363 aa11.73□□□□□ -0.53
SCAF11-205ENST00000465950 ST20-MTHFSA0A0A6YYL1 179 aa11.72□□□□□ -0.53
SCAF11-205ENST00000465950 NRDCO43847 1150 aa11.72□□□□□ -0.53
SCAF11-205ENST00000465950 MTHFSP49914 203 aa11.72□□□□□ -0.53
SCAF11-205ENST00000465950 NUTM2GQ5VZR2 741 aa11.72□□□□□ -0.53
SCAF11-205ENST00000465950 ZNF530Q6P9A1 599 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-205ENST00000465950 CCDC43Q96MW1 224 aaKnown RBP11.72□□□□□ -0.53
SCAF11-205ENST00000465950 MYO1BO43795 1136 aa11.72□□□□□ -0.53
SCAF11-205ENST00000465950 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
SCAF11-205ENST00000465950 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
SCAF11-205ENST00000465950 ARHGEF10O15013 1369 aa11.72□□□□□ -0.53
SCAF11-205ENST00000465950 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
SCAF11-205ENST00000465950 KIAA1107Q9UPP5 1409 aa11.72□□□□□ -0.53
SCAF11-205ENST00000465950 API5Q9BZZ5 524 aaKnown RBP11.71□□□□□ -0.53
SCAF11-205ENST00000465950 TBC1D2BQ9UPU7 963 aa11.71□□□□□ -0.53
SCAF11-205ENST00000465950 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.54
SCAF11-205ENST00000465950 MPHOSPH6Q99547 160 aaKnown RBP11.71□□□□□ -0.54
SCAF11-205ENST00000465950 G3BP1Q13283 466 aaKnown RBP eCLIP11.7□□□□□ -0.54
SCAF11-205ENST00000465950 CERKQ8TCT0 537 aa11.7□□□□□ -0.54
SCAF11-205ENST00000465950 HDAC9Q9UKV0 1011 aa11.7□□□□□ -0.54
SCAF11-205ENST00000465950 R3HCC1Q9Y3T6 440 aaKnown RBP11.7□□□□□ -0.54
SCAF11-205ENST00000465950 NUP160Q12769 1436 aa11.7□□□□□ -0.54
SCAF11-205ENST00000465950 ZMYM3Q14202 1370 aa11.7□□□□□ -0.54
SCAF11-205ENST00000465950 MFAP1P55081 439 aaKnown RBP11.7□□□□□ -0.54
SCAF11-205ENST00000465950 TSPYL4Q9UJ04 414 aa11.7□□□□□ -0.54
SCAF11-205ENST00000465950 EIF4G3O43432 1585 aaKnown RBP11.7□□□□□ -0.54
SCAF11-205ENST00000465950 ZC3H6P61129 1189 aaKnown RBP11.7□□□□□ -0.54
SCAF11-205ENST00000465950 GPR162Q16538 588 aa11.7□□□□□ -0.54
SCAF11-205ENST00000465950 L3MBTL2Q969R5 705 aa11.7□□□□□ -0.54
SCAF11-205ENST00000465950 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
SCAF11-205ENST00000465950 EIF2S2P20042 333 aaKnown RBP11.7□□□□□ -0.54
SCAF11-205ENST00000465950 USP21Q9UK80 565 aa11.7□□□□□ -0.54
SCAF11-205ENST00000465950 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
SCAF11-205ENST00000465950 PRXQ9BXM0 1461 aa11.69□□□□□ -0.54
SCAF11-205ENST00000465950 SLC4A10Q6U841 1118 aa11.69□□□□□ -0.54
SCAF11-205ENST00000465950 JDP2Q8WYK2 163 aa11.69□□□□□ -0.54
SCAF11-205ENST00000465950 SIN3AQ96ST3 1273 aa11.69□□□□□ -0.54
SCAF11-205ENST00000465950 SUPT6HQ7KZ85 1726 aaKnown RBP11.69□□□□□ -0.54
SCAF11-205ENST00000465950 TTC21AQ8NDW8 1320 aa11.69□□□□□ -0.54
SCAF11-205ENST00000465950 HSPA5P11021 654 aaKnown RBP11.68□□□□□ -0.54
SCAF11-205ENST00000465950 IGHMBP2P38935 993 aaKnown RBP11.68□□□□□ -0.54
SCAF11-205ENST00000465950 FOXO3O43524 673 aa11.68□□□□□ -0.54
SCAF11-205ENST00000465950 CCDC30Q5VVM6 783 aa11.68□□□□□ -0.54
SCAF11-205ENST00000465950 ATF7IPQ6VMQ6 1270 aa11.68□□□□□ -0.54
SCAF11-205ENST00000465950 NINLQ9Y2I6 1382 aa11.68□□□□□ -0.54
SCAF11-205ENST00000465950 ERICH2A1L162 156 aa11.68□□□□□ -0.54
SCAF11-205ENST00000465950 AIDAQ96BJ3 306 aa11.68□□□□□ -0.54
SCAF11-205ENST00000465950 HOOK2Q96ED9 719 aa11.68□□□□□ -0.54
SCAF11-205ENST00000465950 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
SCAF11-205ENST00000465950 GOLGA6L4A6NEF3 574 aa11.67□□□□□ -0.54
SCAF11-205ENST00000465950 PDE6BP35913 854 aa11.67□□□□□ -0.54
SCAF11-205ENST00000465950 MPHOSPH8Q99549 860 aa11.67□□□□□ -0.54
SCAF11-205ENST00000465950 TRAPPC8Q9Y2L5 1435 aa11.67□□□□□ -0.54
SCAF11-205ENST00000465950 RBM5P52756 815 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCAF11-205ENST00000465950 TFCP2L1Q9NZI6 479 aa11.67□□□□□ -0.54
SCAF11-205ENST00000465950 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-205ENST00000465950 RWDD1Q9H446 243 aaPredicted RBP11.66□□□□□ -0.54
SCAF11-205ENST00000465950 ZFYVE16Q7Z3T8 1539 aa11.66□□□□□ -0.54
SCAF11-205ENST00000465950 TRDNQ13061 729 aa11.66□□□□□ -0.54
SCAF11-205ENST00000465950 RUFY2Q8WXA3 655 aa11.66□□□□□ -0.54
SCAF11-205ENST00000465950 BCL2L13Q9BXK5 485 aa11.66□□□□□ -0.54
SCAF11-205ENST00000465950 ZNF287Q9HBT7 754 aa11.66□□□□□ -0.54
SCAF11-205ENST00000465950 CCDC87Q9NVE4 849 aa11.66□□□□□ -0.54
SCAF11-205ENST00000465950 RAD21O60216 631 aa11.65□□□□□ -0.54
SCAF11-205ENST00000465950 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
SCAF11-205ENST00000465950 UNC13AQ9UPW8 1703 aa11.65□□□□□ -0.54
SCAF11-205ENST00000465950 SOGA3Q5TF21 947 aa11.65□□□□□ -0.54
SCAF11-205ENST00000465950 TMEM132EQ6IEE7 984 aa11.65□□□□□ -0.54
SCAF11-205ENST00000465950 DNAI2Q9GZS0 605 aa11.65□□□□□ -0.54
SCAF11-205ENST00000465950 ADAMTS12P58397 1594 aa11.65□□□□□ -0.54
SCAF11-205ENST00000465950 DHX16O60231 1041 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms