RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 UPF1Q92900 1129 aaKnown RBP eCLIP33.87■■■■□ 3.01
USP42-205ENST00000465073 LRPPRCP42704 1394 aaKnown RBP33.87■■■■□ 3.01
USP42-205ENST00000465073 TECPR2O15040 1411 aa33.86■■■■□ 3.01
USP42-205ENST00000465073 QTRT2Q9H974 415 aaKnown RBP33.86■■■■□ 3.01
USP42-205ENST00000465073 ADAMTS2O95450 1211 aa33.85■■■■□ 3.01
USP42-205ENST00000465073 ESCO1Q5FWF5 840 aa33.85■■■■□ 3.01
USP42-205ENST00000465073 NGLY1Q96IV0 654 aa33.85■■■■□ 3.01
USP42-205ENST00000465073 ABCC11Q96J66 1382 aa33.85■■■■□ 3.01
USP42-205ENST00000465073 CDC42BPGQ6DT37 1551 aa33.85■■■■□ 3.01
USP42-205ENST00000465073 WAPLQ7Z5K2 1190 aa33.83■■■■□ 3.01
USP42-205ENST00000465073 NPHP3Q7Z494 1330 aa33.83■■■■□ 3.01
USP42-205ENST00000465073 RBM6P78332 1123 aaKnown RBP33.82■■■■□ 3.01
USP42-205ENST00000465073 TMEM132EQ6IEE7 984 aa33.82■■■■□ 3
USP42-205ENST00000465073 PIK3C2GO75747 1445 aa33.81■■■■□ 3
USP42-205ENST00000465073 IFT172Q9UG01 1749 aa33.8■■■■□ 3
USP42-205ENST00000465073 FOXO3O43524 673 aa33.75■■■□□ 2.99
USP42-205ENST00000465073 YTHDC2Q9H6S0 1430 aaKnown RBP33.74■■■□□ 2.99
USP42-205ENST00000465073 SIRT1Q96EB6 747 aa33.74■■■□□ 2.99
USP42-205ENST00000465073 C14orf93Q9H972 538 aaKnown RBP33.74■■■□□ 2.99
USP42-205ENST00000465073 PLEKHH1Q9ULM0 1364 aa33.74■■■□□ 2.99
USP42-205ENST00000465073 PXDNQ92626 1479 aa33.72■■■□□ 2.99
USP42-205ENST00000465073 NUTM2FA1L443 756 aa33.72■■■□□ 2.99
USP42-205ENST00000465073 USP21Q9UK80 565 aa33.72■■■□□ 2.99
USP42-205ENST00000465073 FNBP4Q8N3X1 1017 aaPredicted RBP33.71■■■□□ 2.99
USP42-205ENST00000465073 KNDC1Q76NI1 1749 aa33.71■■■□□ 2.99
USP42-205ENST00000465073 COL22A1Q8NFW1 1626 aaPredicted RBP33.71■■■□□ 2.99
USP42-205ENST00000465073 RGS12O14924 1447 aa33.71■■■□□ 2.99
USP42-205ENST00000465073 XPCQ01831 940 aaPredicted RBP33.69■■■□□ 2.98
USP42-205ENST00000465073 TRPC5Q9UL62 973 aaPredicted RBP33.68■■■□□ 2.98
USP42-205ENST00000465073 MYOM2P54296 1465 aa33.68■■■□□ 2.98
USP42-205ENST00000465073 NRXN1Q9ULB1 1477 aa33.67■■■□□ 2.98
USP42-205ENST00000465073 DHX57Q6P158 1386 aaKnown RBP33.66■■■□□ 2.98
USP42-205ENST00000465073 CFAP70Q5T0N1 1121 aa33.65■■■□□ 2.98
USP42-205ENST00000465073 RAB3GAP2Q9H2M9 1393 aa33.64■■■□□ 2.98
USP42-205ENST00000465073 FMN2Q9NZ56 1722 aa33.6■■■□□ 2.97
USP42-205ENST00000465073 ATRNO75882 1429 aa33.59■■■□□ 2.97
USP42-205ENST00000465073 SPATA31A3Q5VYP0 1347 aa33.57■■■□□ 2.96
USP42-205ENST00000465073 KRT28Q7Z3Y7 464 aa33.56■■■□□ 2.96
USP42-205ENST00000465073 PRAM1Q96QH2 718 aa33.56■■■□□ 2.96
USP42-205ENST00000465073 KIF1AQ12756 1690 aa33.55■■■□□ 2.96
USP42-205ENST00000465073 BCL9LQ86UU0 1499 aa33.54■■■□□ 2.96
USP42-205ENST00000465073 PHF8Q9UPP1 1060 aa33.54■■■□□ 2.96
USP42-205ENST00000465073 ATAD2Q6PL18 1390 aa33.52■■■□□ 2.96
USP42-205ENST00000465073 POGKQ9P215 609 aa33.51■■■□□ 2.96
USP42-205ENST00000465073 PSME1Q06323 249 aa33.5■■■□□ 2.95
USP42-205ENST00000465073 SAFB2Q14151 953 aaKnown RBP eCLIP33.5■■■□□ 2.95
USP42-205ENST00000465073 MARF1Q9Y4F3 1742 aaKnown RBP33.48■■■□□ 2.95
USP42-205ENST00000465073 DLC1Q96QB1 1528 aa33.48■■■□□ 2.95
USP42-205ENST00000465073 GJD4Q96KN9 370 aaPredicted RBP33.46■■■□□ 2.95
USP42-205ENST00000465073 HRCP23327 699 aa33.45■■■□□ 2.95
USP42-205ENST00000465073 STAC3Q96MF2 364 aa33.45■■■□□ 2.95
USP42-205ENST00000465073 UNC5CLQ8IV45 518 aa33.44■■■□□ 2.94
USP42-205ENST00000465073 TNS3Q68CZ2 1445 aa33.43■■■□□ 2.94
USP42-205ENST00000465073 DCAF11Q8TEB1 546 aa33.43■■■□□ 2.94
USP42-205ENST00000465073 KDM2AQ9Y2K7 1162 aa33.43■■■□□ 2.94
USP42-205ENST00000465073 SBNO1A3KN83 1393 aa33.42■■■□□ 2.94
USP42-205ENST00000465073 ADGRB1O14514 1584 aa33.42■■■□□ 2.94
USP42-205ENST00000465073 ANKARQ7Z5J8 1434 aa33.42■■■□□ 2.94
USP42-205ENST00000465073 HAP1P54257 671 aaPredicted RBP33.41■■■□□ 2.94
USP42-205ENST00000465073 TRAK1Q9UPV9 953 aa33.41■■■□□ 2.94
USP42-205ENST00000465073 RGPD8O14715 1765 aaPredicted RBP33.41■■■□□ 2.94
USP42-205ENST00000465073 SLIT2O94813 1529 aa33.4■■■□□ 2.94
USP42-205ENST00000465073 ARHGEF10O15013 1369 aa33.38■■■□□ 2.93
USP42-205ENST00000465073 USP32Q8NFA0 1604 aa33.36■■■□□ 2.93
USP42-205ENST00000465073 ADGRB2O60241 1585 aa33.36■■■□□ 2.93
USP42-205ENST00000465073 LMOD2Q6P5Q4 547 aa33.36■■■□□ 2.93
USP42-205ENST00000465073 PMFBP1Q8TBY8 1022 aa33.36■■■□□ 2.93
USP42-205ENST00000465073 CABLES1Q8TDN4 633 aa33.36■■■□□ 2.93
USP42-205ENST00000465073 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.35■■■□□ 2.93
USP42-205ENST00000465073 HIRIP3Q9BW71 556 aaPredicted RBP33.34■■■□□ 2.93
USP42-205ENST00000465073 EIF3AQ14152 1382 aaKnown RBP33.34■■■□□ 2.93
USP42-205ENST00000465073 CCDC125Q86Z20 511 aa33.33■■■□□ 2.93
USP42-205ENST00000465073 RALGAPBQ86X10 1494 aa33.33■■■□□ 2.93
USP42-205ENST00000465073 MINK1Q8N4C8 1332 aaPredicted RBP33.32■■■□□ 2.92
USP42-205ENST00000465073 PLEKHG5O94827 1062 aa33.3■■■□□ 2.92
USP42-205ENST00000465073 WASLO00401 505 aaPredicted RBP33.29■■■□□ 2.92
USP42-205ENST00000465073 VPS72Q15906 364 aa33.28■■■□□ 2.92
USP42-205ENST00000465073 GPRASP1Q5JY77 1395 aa33.27■■■□□ 2.92
USP42-205ENST00000465073 GLI3P10071 1580 aa33.27■■■□□ 2.92
USP42-205ENST00000465073 PRR36Q9H6K5 1346 aa33.26■■■□□ 2.92
USP42-205ENST00000465073 TULP4Q9NRJ4 1543 aa33.24■■■□□ 2.91
USP42-205ENST00000465073 EP400Q96L91 3159 aa33.24■■■□□ 2.91
USP42-205ENST00000465073 FAM83GA6ND36 823 aa33.23■■■□□ 2.91
USP42-205ENST00000465073 CCDC9Q9Y3X0 531 aaKnown RBP33.2■■■□□ 2.91
USP42-205ENST00000465073 ONECUT3O60422 494 aaPredicted RBP33.19■■■□□ 2.9
USP42-205ENST00000465073 SEPT12Q8IYM1 358 aa33.19■■■□□ 2.9
USP42-205ENST00000465073 NGDNQ8NEJ9 315 aaKnown RBP33.19■■■□□ 2.9
USP42-205ENST00000465073 NWD2Q9ULI1 1742 aa33.19■■■□□ 2.9
USP42-205ENST00000465073 ABCA3Q99758 1704 aa33.19■■■□□ 2.9
USP42-205ENST00000465073 ZRANB1Q9UGI0 708 aa33.18■■■□□ 2.9
USP42-205ENST00000465073 TRPM3Q9HCF6 1732 aaPredicted RBP33.17■■■□□ 2.9
USP42-205ENST00000465073 PLCH1Q4KWH8 1693 aa33.17■■■□□ 2.9
USP42-205ENST00000465073 BLMP54132 1417 aaPredicted RBP33.13■■■□□ 2.89
USP42-205ENST00000465073 NUDT16Q96DE0 195 aaKnown RBP33.13■■■□□ 2.89
USP42-205ENST00000465073 ALS2Q96Q42 1657 aa33.12■■■□□ 2.89
USP42-205ENST00000465073 PAK3O75914 559 aaPredicted RBP33.12■■■□□ 2.89
USP42-205ENST00000465073 BTG4Q9NY30 223 aa33.11■■■□□ 2.89
USP42-205ENST00000465073 ARHGEF28Q8N1W1 1705 aaKnown RBP33.1■■■□□ 2.89
USP42-205ENST00000465073 KRT27Q7Z3Y8 459 aa33.08■■■□□ 2.89
USP42-205ENST00000465073 CDK19Q9BWU1 502 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms