RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ROCK2O75116 1388 aaKnown RBP19.59■□□□□ 0.73
LIMD1-203ENST00000465039 SLAIN2Q9P270 581 aa19.59■□□□□ 0.73
LIMD1-203ENST00000465039 ILDR1Q86SU0 546 aaPredicted RBP19.58■□□□□ 0.72
LIMD1-203ENST00000465039 EIF3AQ14152 1382 aaKnown RBP19.57■□□□□ 0.72
LIMD1-203ENST00000465039 PRAM1Q96QH2 718 aa19.57■□□□□ 0.72
LIMD1-203ENST00000465039 PLEKHH1Q9ULM0 1364 aa19.57■□□□□ 0.72
LIMD1-203ENST00000465039 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
LIMD1-203ENST00000465039 NBPF1Q3BBV0 1214 aa19.56■□□□□ 0.72
LIMD1-203ENST00000465039 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
LIMD1-203ENST00000465039 FMN2Q9NZ56 1722 aa19.56■□□□□ 0.72
LIMD1-203ENST00000465039 NBPF8Q3BBV2 869 aa19.55■□□□□ 0.72
LIMD1-203ENST00000465039 WAPLQ7Z5K2 1190 aa19.55■□□□□ 0.72
LIMD1-203ENST00000465039 POGKQ9P215 609 aa19.55■□□□□ 0.72
LIMD1-203ENST00000465039 ANKARQ7Z5J8 1434 aa19.53■□□□□ 0.72
LIMD1-203ENST00000465039 C1orf167Q5SNV9 1468 aa19.53■□□□□ 0.72
LIMD1-203ENST00000465039 AHDC1Q5TGY3 1603 aaPredicted RBP19.52■□□□□ 0.72
LIMD1-203ENST00000465039 SBNO2Q9Y2G9 1366 aa19.52■□□□□ 0.72
LIMD1-203ENST00000465039 PIP4K2BP78356 416 aa19.51■□□□□ 0.71
LIMD1-203ENST00000465039 CENPJQ9HC77 1338 aaPredicted RBP19.51■□□□□ 0.71
LIMD1-203ENST00000465039 TULP4Q9NRJ4 1543 aa19.49■□□□□ 0.71
LIMD1-203ENST00000465039 KIF1AQ12756 1690 aa19.49■□□□□ 0.71
LIMD1-203ENST00000465039 QRICH2Q9H0J4 1663 aa19.49■□□□□ 0.71
LIMD1-203ENST00000465039 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
LIMD1-203ENST00000465039 NHSL1Q5SYE7 1610 aa19.48■□□□□ 0.71
LIMD1-203ENST00000465039 CARD11Q9BXL7 1154 aa19.48■□□□□ 0.71
LIMD1-203ENST00000465039 BRINP3Q76B58 766 aa19.47■□□□□ 0.71
LIMD1-203ENST00000465039 SLC24A1O60721 1099 aa19.45■□□□□ 0.7
LIMD1-203ENST00000465039 WASLO00401 505 aaPredicted RBP19.44■□□□□ 0.7
LIMD1-203ENST00000465039 ITSN1Q15811 1721 aa19.44■□□□□ 0.7
LIMD1-203ENST00000465039 COL16A1Q07092 1604 aaPredicted RBP19.43■□□□□ 0.7
LIMD1-203ENST00000465039 PHLPP1O60346 1717 aa19.43■□□□□ 0.7
LIMD1-203ENST00000465039 SAFB2Q14151 953 aaKnown RBP eCLIP19.43■□□□□ 0.7
LIMD1-203ENST00000465039 MINK1Q8N4C8 1332 aaPredicted RBP19.43■□□□□ 0.7
LIMD1-203ENST00000465039 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
LIMD1-203ENST00000465039 HSPA1LP34931 641 aa19.42■□□□□ 0.7
LIMD1-203ENST00000465039 ATP7BP35670 1465 aa19.41■□□□□ 0.7
LIMD1-203ENST00000465039 NPHP3Q7Z494 1330 aa19.4■□□□□ 0.7
LIMD1-203ENST00000465039 TOPAZ1Q8N9V7 1692 aa19.4■□□□□ 0.7
LIMD1-203ENST00000465039 EVC2Q86UK5 1308 aa19.38■□□□□ 0.69
LIMD1-203ENST00000465039 USP47Q96K76 1375 aa19.37■□□□□ 0.69
LIMD1-203ENST00000465039 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
LIMD1-203ENST00000465039 HIRIP3Q9BW71 556 aaPredicted RBP19.37■□□□□ 0.69
LIMD1-203ENST00000465039 SOS2Q07890 1332 aaPredicted RBP19.36■□□□□ 0.69
LIMD1-203ENST00000465039 PUS7Q96PZ0 661 aaKnown RBP19.36■□□□□ 0.69
LIMD1-203ENST00000465039 ORAI2Q96SN7 254 aa19.36■□□□□ 0.69
LIMD1-203ENST00000465039 RGPD8O14715 1765 aaPredicted RBP19.36■□□□□ 0.69
LIMD1-203ENST00000465039 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
LIMD1-203ENST00000465039 PXDNQ92626 1479 aa19.35■□□□□ 0.69
LIMD1-203ENST00000465039 JCADQ9P266 1359 aa19.35■□□□□ 0.69
LIMD1-203ENST00000465039 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
LIMD1-203ENST00000465039 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
LIMD1-203ENST00000465039 PHF8Q9UPP1 1060 aa19.34■□□□□ 0.69
LIMD1-203ENST00000465039 CCDC61Q9Y6R9 512 aa19.34■□□□□ 0.69
LIMD1-203ENST00000465039 ATAD2Q6PL18 1390 aa19.33■□□□□ 0.69
LIMD1-203ENST00000465039 LRRC59Q96AG4 307 aaKnown RBP19.32■□□□□ 0.68
LIMD1-203ENST00000465039 NUDT16Q96DE0 195 aaKnown RBP19.32■□□□□ 0.68
LIMD1-203ENST00000465039 POLR3AO14802 1390 aaPredicted RBP19.32■□□□□ 0.68
LIMD1-203ENST00000465039 BRD4O60885 1362 aaPredicted RBP19.31■□□□□ 0.68
LIMD1-203ENST00000465039 PLEKHG3A1L390 1219 aa19.3■□□□□ 0.68
LIMD1-203ENST00000465039 SRPK2P78362 688 aaKnown RBP19.3■□□□□ 0.68
LIMD1-203ENST00000465039 TESK2Q96S53 571 aa19.3■□□□□ 0.68
LIMD1-203ENST00000465039 SBNO1A3KN83 1393 aa19.3■□□□□ 0.68
LIMD1-203ENST00000465039 COL22A1Q8NFW1 1626 aaPredicted RBP19.29■□□□□ 0.68
LIMD1-203ENST00000465039 SPATA31A6Q5VVP1 1343 aa19.29■□□□□ 0.68
LIMD1-203ENST00000465039 ST20-MTHFSA0A0A6YYL1 179 aa19.29■□□□□ 0.68
LIMD1-203ENST00000465039 NUTM2FA1L443 756 aa19.29■□□□□ 0.68
LIMD1-203ENST00000465039 NINLQ9Y2I6 1382 aa19.29■□□□□ 0.68
LIMD1-203ENST00000465039 FOXO3O43524 673 aa19.28■□□□□ 0.68
LIMD1-203ENST00000465039 PPIP5K1Q6PFW1 1433 aa19.27■□□□□ 0.68
LIMD1-203ENST00000465039 PSME1Q06323 249 aa19.27■□□□□ 0.68
LIMD1-203ENST00000465039 CDCA8Q53HL2 280 aa19.26■□□□□ 0.67
LIMD1-203ENST00000465039 PNPLA6Q8IY17 1366 aa19.26■□□□□ 0.67
LIMD1-203ENST00000465039 TNS3Q68CZ2 1445 aa19.25■□□□□ 0.67
LIMD1-203ENST00000465039 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
LIMD1-203ENST00000465039 ARHGEF10O15013 1369 aa19.25■□□□□ 0.67
LIMD1-203ENST00000465039 EIF4G2P78344 907 aaKnown RBP eCLIP19.25■□□□□ 0.67
LIMD1-203ENST00000465039 CABP2Q9NPB3 220 aa19.24■□□□□ 0.67
LIMD1-203ENST00000465039 SPATA31A3Q5VYP0 1347 aa19.24■□□□□ 0.67
LIMD1-203ENST00000465039 TMF1P82094 1093 aa19.23■□□□□ 0.67
LIMD1-203ENST00000465039 NGDNQ8NEJ9 315 aaKnown RBP19.23■□□□□ 0.67
LIMD1-203ENST00000465039 MED1Q15648 1581 aaPredicted RBP19.23■□□□□ 0.67
LIMD1-203ENST00000465039 KRT28Q7Z3Y7 464 aa19.22■□□□□ 0.67
LIMD1-203ENST00000465039 ALS2Q96Q42 1657 aa19.21■□□□□ 0.67
LIMD1-203ENST00000465039 PMFBP1Q8TBY8 1022 aa19.21■□□□□ 0.67
LIMD1-203ENST00000465039 DDX17Q92841 729 aaKnown RBP19.21■□□□□ 0.67
LIMD1-203ENST00000465039 ACEP12821 1306 aa19.2■□□□□ 0.66
LIMD1-203ENST00000465039 AKAP12Q02952 1782 aa19.19■□□□□ 0.66
LIMD1-203ENST00000465039 USP6P35125 1406 aa19.19■□□□□ 0.66
LIMD1-203ENST00000465039 CPSF1Q10570 1443 aaKnown RBP19.19■□□□□ 0.66
LIMD1-203ENST00000465039 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
LIMD1-203ENST00000465039 DISP3Q9P2K9 1392 aa19.18■□□□□ 0.66
LIMD1-203ENST00000465039 CABP1Q9NZU7 370 aa19.17■□□□□ 0.66
LIMD1-203ENST00000465039 MON2Q7Z3U7 1717 aa19.17■□□□□ 0.66
LIMD1-203ENST00000465039 SSH2Q76I76 1423 aa19.17■□□□□ 0.66
LIMD1-203ENST00000465039 NRKQ7Z2Y5 1582 aa19.15■□□□□ 0.66
LIMD1-203ENST00000465039 XPCQ01831 940 aaPredicted RBP19.15■□□□□ 0.66
LIMD1-203ENST00000465039 LRP6O75581 1613 aa19.14■□□□□ 0.66
LIMD1-203ENST00000465039 HSPA5P11021 654 aaKnown RBP19.14■□□□□ 0.65
LIMD1-203ENST00000465039 TERF2IPQ9NYB0 399 aa19.14■□□□□ 0.65
LIMD1-203ENST00000465039 CD163L1Q9NR16 1453 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms