RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 KIF1BO60333 1816 aa25.12■■□□□ 1.61
COPS6-205ENST00000465027 ESCO1Q5FWF5 840 aa25.09■■□□□ 1.61
COPS6-205ENST00000465027 PXDNQ92626 1479 aa25.09■■□□□ 1.61
COPS6-205ENST00000465027 NUTM2FA1L443 756 aa25.06■■□□□ 1.6
COPS6-205ENST00000465027 VGFO15240 615 aaPredicted RBP25.06■■□□□ 1.6
COPS6-205ENST00000465027 FOXO3O43524 673 aa25.06■■□□□ 1.6
COPS6-205ENST00000465027 GJD4Q96KN9 370 aaPredicted RBP25.06■■□□□ 1.6
COPS6-205ENST00000465027 HFM1A2PYH4 1435 aa25.05■■□□□ 1.6
COPS6-205ENST00000465027 PRAG1Q86YV5 1406 aa25.05■■□□□ 1.6
COPS6-205ENST00000465027 MARF1Q9Y4F3 1742 aaKnown RBP25.05■■□□□ 1.6
COPS6-205ENST00000465027 NPHP3Q7Z494 1330 aa25.05■■□□□ 1.6
COPS6-205ENST00000465027 FOXD1Q16676 465 aa25.03■■□□□ 1.6
COPS6-205ENST00000465027 CDC42BPGQ6DT37 1551 aa25.02■■□□□ 1.6
COPS6-205ENST00000465027 CCDC125Q86Z20 511 aa25.01■■□□□ 1.59
COPS6-205ENST00000465027 GLI3P10071 1580 aa25.01■■□□□ 1.59
COPS6-205ENST00000465027 DEFB132Q7Z7B7 95 aa25■■□□□ 1.59
COPS6-205ENST00000465027 PPLO60437 1756 aa24.99■■□□□ 1.59
COPS6-205ENST00000465027 NAIPQ13075 1403 aa24.99■■□□□ 1.59
COPS6-205ENST00000465027 WAPLQ7Z5K2 1190 aa24.99■■□□□ 1.59
COPS6-205ENST00000465027 RALGAPBQ86X10 1494 aa24.99■■□□□ 1.59
COPS6-205ENST00000465027 STK26Q9P289 416 aa24.98■■□□□ 1.59
COPS6-205ENST00000465027 RPGRIP1LQ68CZ1 1315 aa24.96■■□□□ 1.59
COPS6-205ENST00000465027 UNC5CLQ8IV45 518 aa24.96■■□□□ 1.59
COPS6-205ENST00000465027 BLMP54132 1417 aaPredicted RBP24.95■■□□□ 1.59
COPS6-205ENST00000465027 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.95■■□□□ 1.59
COPS6-205ENST00000465027 SLIT2O94813 1529 aa24.95■■□□□ 1.58
COPS6-205ENST00000465027 BRWD3Q6RI45 1802 aa24.95■■□□□ 1.58
COPS6-205ENST00000465027 PLEKHH1Q9ULM0 1364 aa24.94■■□□□ 1.58
COPS6-205ENST00000465027 PLEKHG5O94827 1062 aa24.94■■□□□ 1.58
COPS6-205ENST00000465027 ADGRF5Q8IZF2 1346 aa24.93■■□□□ 1.58
COPS6-205ENST00000465027 SPATA31A3Q5VYP0 1347 aa24.91■■□□□ 1.58
COPS6-205ENST00000465027 SEPT12Q8IYM1 358 aa24.9■■□□□ 1.58
COPS6-205ENST00000465027 LRPPRCP42704 1394 aaKnown RBP24.9■■□□□ 1.58
COPS6-205ENST00000465027 TMEM132EQ6IEE7 984 aa24.89■■□□□ 1.58
COPS6-205ENST00000465027 CABLES1Q8TDN4 633 aa24.89■■□□□ 1.58
COPS6-205ENST00000465027 USP32Q8NFA0 1604 aa24.89■■□□□ 1.57
COPS6-205ENST00000465027 SLC4A1APQ9BWU0 796 aaKnown RBP24.88■■□□□ 1.57
COPS6-205ENST00000465027 KRT28Q7Z3Y7 464 aa24.87■■□□□ 1.57
COPS6-205ENST00000465027 TECPR2O15040 1411 aa24.86■■□□□ 1.57
COPS6-205ENST00000465027 FMN2Q9NZ56 1722 aa24.86■■□□□ 1.57
COPS6-205ENST00000465027 RRBP1Q9P2E9 1410 aaKnown RBP24.86■■□□□ 1.57
COPS6-205ENST00000465027 RGL3Q3MIN7 710 aa24.85■■□□□ 1.57
COPS6-205ENST00000465027 PSDA5PKW4 1024 aaPredicted RBP24.83■■□□□ 1.57
COPS6-205ENST00000465027 SF3B2Q13435 895 aaKnown RBP24.83■■□□□ 1.57
COPS6-205ENST00000465027 CCDC144AA2RUR9 1427 aa24.83■■□□□ 1.57
COPS6-205ENST00000465027 HAP1P54257 671 aaPredicted RBP24.82■■□□□ 1.56
COPS6-205ENST00000465027 VPS72Q15906 364 aa24.82■■□□□ 1.56
COPS6-205ENST00000465027 CCDC9Q9Y3X0 531 aaKnown RBP24.82■■□□□ 1.56
COPS6-205ENST00000465027 KIF1AQ12756 1690 aa24.81■■□□□ 1.56
COPS6-205ENST00000465027 PLCH1Q4KWH8 1693 aa24.81■■□□□ 1.56
COPS6-205ENST00000465027 ABCC11Q96J66 1382 aa24.8■■□□□ 1.56
COPS6-205ENST00000465027 KNDC1Q76NI1 1749 aa24.8■■□□□ 1.56
COPS6-205ENST00000465027 RGPD8O14715 1765 aaPredicted RBP24.8■■□□□ 1.56
COPS6-205ENST00000465027 LRP5O75197 1615 aa24.79■■□□□ 1.56
COPS6-205ENST00000465027 TNS3Q68CZ2 1445 aa24.79■■□□□ 1.56
COPS6-205ENST00000465027 KRT27Q7Z3Y8 459 aa24.79■■□□□ 1.56
COPS6-205ENST00000465027 LMOD2Q6P5Q4 547 aa24.77■■□□□ 1.56
COPS6-205ENST00000465027 PHF8Q9UPP1 1060 aa24.77■■□□□ 1.56
COPS6-205ENST00000465027 IFT172Q9UG01 1749 aa24.77■■□□□ 1.56
COPS6-205ENST00000465027 SPATA31E1Q6ZUB1 1445 aa24.77■■□□□ 1.56
COPS6-205ENST00000465027 YTHDC2Q9H6S0 1430 aaKnown RBP24.77■■□□□ 1.56
COPS6-205ENST00000465027 ABCA3Q99758 1704 aa24.76■■□□□ 1.55
COPS6-205ENST00000465027 ONECUT3O60422 494 aaPredicted RBP24.75■■□□□ 1.55
COPS6-205ENST00000465027 A0A0G2JS52 829 aa24.74■■□□□ 1.55
COPS6-205ENST00000465027 FAM83GA6ND36 823 aa24.74■■□□□ 1.55
COPS6-205ENST00000465027 MYT1Q01538 1121 aa24.74■■□□□ 1.55
COPS6-205ENST00000465027 NWD2Q9ULI1 1742 aa24.74■■□□□ 1.55
COPS6-205ENST00000465027 PIK3C2GO75747 1445 aa24.73■■□□□ 1.55
COPS6-205ENST00000465027 ANKRD30BQ9BXX2 1392 aa24.72■■□□□ 1.55
COPS6-205ENST00000465027 HRCP23327 699 aa24.72■■□□□ 1.55
COPS6-205ENST00000465027 SAFB2Q14151 953 aaKnown RBP eCLIP24.72■■□□□ 1.55
COPS6-205ENST00000465027 PSME1Q06323 249 aa24.71■■□□□ 1.55
COPS6-205ENST00000465027 FAM98CQ17RN3 349 aaKnown RBP24.71■■□□□ 1.55
COPS6-205ENST00000465027 FAM182BQ5T319 152 aa24.71■■□□□ 1.55
COPS6-205ENST00000465027 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.54
COPS6-205ENST00000465027 SBNO1A3KN83 1393 aa24.69■■□□□ 1.54
COPS6-205ENST00000465027 BAG6P46379 1132 aa24.69■■□□□ 1.54
COPS6-205ENST00000465027 PMFBP1Q8TBY8 1022 aa24.69■■□□□ 1.54
COPS6-205ENST00000465027 EN1Q05925 392 aaPredicted RBP24.68■■□□□ 1.54
COPS6-205ENST00000465027 NRAPQ86VF7 1730 aa24.67■■□□□ 1.54
COPS6-205ENST00000465027 ARHGEF10O15013 1369 aa24.66■■□□□ 1.54
COPS6-205ENST00000465027 BTG4Q9NY30 223 aa24.65■■□□□ 1.54
COPS6-205ENST00000465027 R3HDM1Q15032 1099 aaKnown RBP24.64■■□□□ 1.54
COPS6-205ENST00000465027 CFAP70Q5T0N1 1121 aa24.64■■□□□ 1.54
COPS6-205ENST00000465027 PRAM1Q96QH2 718 aa24.64■■□□□ 1.54
COPS6-205ENST00000465027 SIRT1Q96EB6 747 aa24.63■■□□□ 1.53
COPS6-205ENST00000465027 C14orf93Q9H972 538 aaKnown RBP24.63■■□□□ 1.53
COPS6-205ENST00000465027 MPHOSPH9Q99550 1183 aa24.61■■□□□ 1.53
COPS6-205ENST00000465027 TRPM3Q9HCF6 1732 aaPredicted RBP24.59■■□□□ 1.53
COPS6-205ENST00000465027 RGPD1P0DJD0 1748 aa24.58■■□□□ 1.53
COPS6-205ENST00000465027 DHX57Q6P158 1386 aaKnown RBP24.58■■□□□ 1.53
COPS6-205ENST00000465027 EZH2Q15910 746 aaKnown RBP24.56■■□□□ 1.52
COPS6-205ENST00000465027 HIRIP3Q9BW71 556 aaPredicted RBP24.56■■□□□ 1.52
COPS6-205ENST00000465027 COL14A1Q05707 1796 aaKnown RBP24.56■■□□□ 1.52
COPS6-205ENST00000465027 SPATA31A5Q5VU36 1347 aa24.56■■□□□ 1.52
COPS6-205ENST00000465027 SPATA31A7Q8IWB4 1347 aa24.56■■□□□ 1.52
COPS6-205ENST00000465027 TNS1Q9HBL0 1735 aaKnown RBP24.55■■□□□ 1.52
COPS6-205ENST00000465027 POGKQ9P215 609 aa24.55■■□□□ 1.52
COPS6-205ENST00000465027 ALS2Q96Q42 1657 aa24.55■■□□□ 1.52
COPS6-205ENST00000465027 ANKARQ7Z5J8 1434 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms