RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 TRHP20396 242 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-210ENST00000464987 MORC1Q86VD1 984 aa24.6■■□□□ 1.53
TSPAN4-210ENST00000464987 DMRT2Q9Y5R5 561 aa24.6■■□□□ 1.53
TSPAN4-210ENST00000464987 POLR3AO14802 1390 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-210ENST00000464987 TMEM131LA2VDJ0 1609 aa24.59■■□□□ 1.53
TSPAN4-210ENST00000464987 FBXO31Q5XUX0 539 aaPredicted RBP24.58■■□□□ 1.52
TSPAN4-210ENST00000464987 TRMT2AQ8IZ69 625 aaKnown RBP24.58■■□□□ 1.52
TSPAN4-210ENST00000464987 FAM69CQ0P6D2 419 aa24.57■■□□□ 1.52
TSPAN4-210ENST00000464987 CABP2Q9NPB3 220 aa24.57■■□□□ 1.52
TSPAN4-210ENST00000464987 STK26Q9P289 416 aa24.57■■□□□ 1.52
TSPAN4-210ENST00000464987 SLC52A1Q9NWF4 448 aa24.57■■□□□ 1.52
TSPAN4-210ENST00000464987 SKAP1Q86WV1 359 aa24.56■■□□□ 1.52
TSPAN4-210ENST00000464987 EVC2Q86UK5 1308 aa24.55■■□□□ 1.52
TSPAN4-210ENST00000464987 USP32Q8NFA0 1604 aa24.55■■□□□ 1.52
TSPAN4-210ENST00000464987 DIP2BQ9P265 1576 aa24.54■■□□□ 1.52
TSPAN4-210ENST00000464987 ZFYVE9O95405 1425 aa24.52■■□□□ 1.52
TSPAN4-210ENST00000464987 CGNL1Q0VF96 1302 aa24.5■■□□□ 1.51
TSPAN4-210ENST00000464987 NKTRP30414 1462 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-210ENST00000464987 ERICH6Q7L0X2 663 aa24.5■■□□□ 1.51
TSPAN4-210ENST00000464987 MTHFSP49914 203 aa24.5■■□□□ 1.51
TSPAN4-210ENST00000464987 ANKRD36BQ8N2N9 1353 aa24.5■■□□□ 1.51
TSPAN4-210ENST00000464987 TCERG1O14776 1098 aaKnown RBP24.48■■□□□ 1.51
TSPAN4-210ENST00000464987 BCAR3O75815 825 aa24.48■■□□□ 1.51
TSPAN4-210ENST00000464987 PTPRMP28827 1452 aa24.47■■□□□ 1.51
TSPAN4-210ENST00000464987 NEUROD2Q15784 382 aa24.47■■□□□ 1.51
TSPAN4-210ENST00000464987 RRP7AQ9Y3A4 280 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-210ENST00000464987 E9PSI1 815 aa24.47■■□□□ 1.51
TSPAN4-210ENST00000464987 WWC1Q8IX03 1113 aa24.47■■□□□ 1.51
TSPAN4-210ENST00000464987 PUS7Q96PZ0 661 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-210ENST00000464987 SRPK2P78362 688 aaKnown RBP24.45■■□□□ 1.5
TSPAN4-210ENST00000464987 MINK1Q8N4C8 1332 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-210ENST00000464987 A0A1W2PP64 1363 aa24.44■■□□□ 1.5
TSPAN4-210ENST00000464987 PAK3O75914 559 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-210ENST00000464987 CLTCQ00610 1675 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-210ENST00000464987 PRAM1Q96QH2 718 aa24.43■■□□□ 1.5
TSPAN4-210ENST00000464987 YTHDC2Q9H6S0 1430 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-210ENST00000464987 PDE4AP27815 886 aa24.42■■□□□ 1.5
TSPAN4-210ENST00000464987 KDM2BQ8NHM5 1336 aa24.42■■□□□ 1.5
TSPAN4-210ENST00000464987 IQSEC2Q5JU85 1478 aa24.42■■□□□ 1.5
TSPAN4-210ENST00000464987 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.42■■□□□ 1.5
TSPAN4-210ENST00000464987 RUNDC1Q96C34 613 aa24.42■■□□□ 1.5
TSPAN4-210ENST00000464987 ALKQ9UM73 1620 aa24.41■■□□□ 1.5
TSPAN4-210ENST00000464987 TCP11L2Q8N4U5 519 aa24.41■■□□□ 1.5
TSPAN4-210ENST00000464987 ANP32AP39687 249 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-210ENST00000464987 NOP58Q9Y2X3 529 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-210ENST00000464987 NGEFQ8N5V2 710 aa24.39■■□□□ 1.49
TSPAN4-210ENST00000464987 STAG3Q9UJ98 1225 aa24.39■■□□□ 1.49
TSPAN4-210ENST00000464987 BACH2Q9BYV9 841 aa24.38■■□□□ 1.49
TSPAN4-210ENST00000464987 GGNBP2Q9H3C7 697 aa24.38■■□□□ 1.49
TSPAN4-210ENST00000464987 MLECQ14165 292 aa24.38■■□□□ 1.49
TSPAN4-210ENST00000464987 POGKQ9P215 609 aa24.38■■□□□ 1.49
TSPAN4-210ENST00000464987 NSD2O96028 1365 aa24.37■■□□□ 1.49
TSPAN4-210ENST00000464987 IPO9Q96P70 1041 aaKnown RBP24.37■■□□□ 1.49
TSPAN4-210ENST00000464987 ABCC11Q96J66 1382 aa24.37■■□□□ 1.49
TSPAN4-210ENST00000464987 CD163L1Q9NR16 1453 aa24.37■■□□□ 1.49
TSPAN4-210ENST00000464987 MS4A1P11836 297 aa24.36■■□□□ 1.49
TSPAN4-210ENST00000464987 NPM2Q86SE8 214 aaKnown RBP24.36■■□□□ 1.49
TSPAN4-210ENST00000464987 CFAP53Q96M91 514 aa24.36■■□□□ 1.49
TSPAN4-210ENST00000464987 REREQ9P2R6 1566 aa24.35■■□□□ 1.49
TSPAN4-210ENST00000464987 AGLP35573 1532 aa24.34■■□□□ 1.49
TSPAN4-210ENST00000464987 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
TSPAN4-210ENST00000464987 U2AF1L5P0DN76 240 aaPredicted RBP24.33■■□□□ 1.48
TSPAN4-210ENST00000464987 U2AF1Q01081 240 aaKnown RBP eCLIP24.33■■□□□ 1.48
TSPAN4-210ENST00000464987 ANKRD26Q9UPS8 1709 aa24.32■■□□□ 1.48
TSPAN4-210ENST00000464987 CENPQQ7L2Z9 268 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-210ENST00000464987 A2ML1A8K2U0 1454 aa24.32■■□□□ 1.48
TSPAN4-210ENST00000464987 ATAD2Q6PL18 1390 aa24.32■■□□□ 1.48
TSPAN4-210ENST00000464987 NINLQ9Y2I6 1382 aa24.32■■□□□ 1.48
TSPAN4-210ENST00000464987 FYB1O15117 783 aa24.31■■□□□ 1.48
TSPAN4-210ENST00000464987 CDK19Q9BWU1 502 aa24.31■■□□□ 1.48
TSPAN4-210ENST00000464987 SPATA31D1Q6ZQQ2 1576 aa24.3■■□□□ 1.48
TSPAN4-210ENST00000464987 SETD1AO15047 1707 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-210ENST00000464987 ARHGEF40Q8TER5 1519 aa24.29■■□□□ 1.48
TSPAN4-210ENST00000464987 NLRP1Q9C000 1473 aa24.29■■□□□ 1.48
TSPAN4-210ENST00000464987 WAPLQ7Z5K2 1190 aa24.29■■□□□ 1.48
TSPAN4-210ENST00000464987 CABP1Q9NZU7 370 aa24.27■■□□□ 1.48
TSPAN4-210ENST00000464987 ADGRB2O60241 1585 aa24.27■■□□□ 1.48
TSPAN4-210ENST00000464987 PANK1Q8TE04 598 aa24.27■■□□□ 1.48
TSPAN4-210ENST00000464987 TERF2IPQ9NYB0 399 aa24.27■■□□□ 1.48
TSPAN4-210ENST00000464987 WDR63Q8IWG1 891 aa24.26■■□□□ 1.47
TSPAN4-210ENST00000464987 RIMS2Q9UQ26 1411 aa24.26■■□□□ 1.47
TSPAN4-210ENST00000464987 COL3A1P02461 1466 aaPredicted RBP24.26■■□□□ 1.47
TSPAN4-210ENST00000464987 KIF13AQ9H1H9 1805 aa24.26■■□□□ 1.47
TSPAN4-210ENST00000464987 PPP6R1Q9UPN7 881 aa24.25■■□□□ 1.47
TSPAN4-210ENST00000464987 KIF20BQ96Q89 1820 aa24.25■■□□□ 1.47
TSPAN4-210ENST00000464987 U2SURPO15042 1029 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-210ENST00000464987 RARSP54136 660 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-210ENST00000464987 CCDC27Q2M243 656 aa24.25■■□□□ 1.47
TSPAN4-210ENST00000464987 FRAT1Q92837 279 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-210ENST00000464987 ZBTB47Q9UFB7 747 aaPredicted RBP24.25■■□□□ 1.47
TSPAN4-210ENST00000464987 COG6Q9Y2V7 657 aa24.25■■□□□ 1.47
TSPAN4-210ENST00000464987 BCL2L13Q9BXK5 485 aa24.24■■□□□ 1.47
TSPAN4-210ENST00000464987 TNNQ9UQP3 1299 aa24.23■■□□□ 1.47
TSPAN4-210ENST00000464987 CANXP27824 592 aaKnown RBP24.23■■□□□ 1.47
TSPAN4-210ENST00000464987 IGHDP01880 384 aa24.22■■□□□ 1.47
TSPAN4-210ENST00000464987 PDE3AQ14432 1141 aa24.22■■□□□ 1.47
TSPAN4-210ENST00000464987 PLEKHF1Q96S99 279 aa24.22■■□□□ 1.47
TSPAN4-210ENST00000464987 FBLN1P23142 703 aa24.22■■□□□ 1.47
TSPAN4-210ENST00000464987 NRXN3Q9Y4C0 1643 aa24.22■■□□□ 1.47
TSPAN4-210ENST00000464987 HDGFL2Q7Z4V5 671 aaPredicted RBP24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms