RNA–Protein interactions for RNA: ENST00000464876.5

ABCA2-212, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 3,438 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-212ENST00000464876 MVPQ14764 893 aaKnown RBP17.48■□□□□ 0.39
ABCA2-212ENST00000464876 LNPKQ9C0E8 428 aa17.48■□□□□ 0.39
ABCA2-212ENST00000464876 TRIM44Q96DX7 344 aaPredicted RBP17.47■□□□□ 0.39
ABCA2-212ENST00000464876 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
ABCA2-212ENST00000464876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.47■□□□□ 0.39
ABCA2-212ENST00000464876 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
ABCA2-212ENST00000464876 NGEFQ8N5V2 710 aa17.46■□□□□ 0.38
ABCA2-212ENST00000464876 SHROOM2Q13796 1616 aa17.45■□□□□ 0.38
ABCA2-212ENST00000464876 NPM1P06748 294 aaKnown RBP eCLIP17.45■□□□□ 0.38
ABCA2-212ENST00000464876 STK26Q9P289 416 aa17.44■□□□□ 0.38
ABCA2-212ENST00000464876 NINLQ9Y2I6 1382 aa17.44■□□□□ 0.38
ABCA2-212ENST00000464876 KANK1Q14678 1352 aa17.44■□□□□ 0.38
ABCA2-212ENST00000464876 CDC42BPBQ9Y5S2 1711 aa17.43■□□□□ 0.38
ABCA2-212ENST00000464876 TRAPPC8Q9Y2L5 1435 aa17.43■□□□□ 0.38
ABCA2-212ENST00000464876 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
ABCA2-212ENST00000464876 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
ABCA2-212ENST00000464876 TRIM27P14373 513 aa17.41■□□□□ 0.38
ABCA2-212ENST00000464876 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
ABCA2-212ENST00000464876 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
ABCA2-212ENST00000464876 GRPEL1Q9HAV7 217 aa17.41■□□□□ 0.38
ABCA2-212ENST00000464876 VSIG10Q8N0Z9 540 aa17.41■□□□□ 0.38
ABCA2-212ENST00000464876 NOB1Q9ULX3 412 aaKnown RBP17.41■□□□□ 0.38
ABCA2-212ENST00000464876 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
ABCA2-212ENST00000464876 MRE11P49959 708 aa17.4■□□□□ 0.38
ABCA2-212ENST00000464876 DUOX2Q9NRD8 1548 aa17.4■□□□□ 0.38
ABCA2-212ENST00000464876 NCLP19338 710 aaKnown RBP17.39■□□□□ 0.37
ABCA2-212ENST00000464876 HSP90AA2PQ14568 343 aaPredicted RBP17.39■□□□□ 0.37
ABCA2-212ENST00000464876 GLIPR1L2Q4G1C9 344 aa17.39■□□□□ 0.37
ABCA2-212ENST00000464876 TMEM57Q8N5G2 664 aa17.39■□□□□ 0.37
ABCA2-212ENST00000464876 DDX11L8A8MPP1 907 aa17.39■□□□□ 0.37
ABCA2-212ENST00000464876 SLC24A1O60721 1099 aa17.39■□□□□ 0.37
ABCA2-212ENST00000464876 CYB5RLQ6IPT4 315 aa17.39■□□□□ 0.37
ABCA2-212ENST00000464876 GGNBP2Q9H3C7 697 aa17.39■□□□□ 0.37
ABCA2-212ENST00000464876 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
ABCA2-212ENST00000464876 ELL2O00472 640 aaPredicted RBP17.38■□□□□ 0.37
ABCA2-212ENST00000464876 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
ABCA2-212ENST00000464876 POLR3AO14802 1390 aaPredicted RBP17.38■□□□□ 0.37
ABCA2-212ENST00000464876 SYNMO15061 1565 aa17.38■□□□□ 0.37
ABCA2-212ENST00000464876 ZCCHC11Q5TAX3 1644 aaKnown RBP17.38■□□□□ 0.37
ABCA2-212ENST00000464876 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
ABCA2-212ENST00000464876 NLRP1Q9C000 1473 aa17.38■□□□□ 0.37
ABCA2-212ENST00000464876 MAST1Q9Y2H9 1570 aa17.38■□□□□ 0.37
ABCA2-212ENST00000464876 ANKRD45Q5TZF3 282 aa17.37■□□□□ 0.37
ABCA2-212ENST00000464876 SCAPERQ9BY12 1400 aa17.37■□□□□ 0.37
ABCA2-212ENST00000464876 PLCH2O75038 1416 aa17.36■□□□□ 0.37
ABCA2-212ENST00000464876 SRPK2P78362 688 aaKnown RBP17.36■□□□□ 0.37
ABCA2-212ENST00000464876 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
ABCA2-212ENST00000464876 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
ABCA2-212ENST00000464876 PREX2Q70Z35 1606 aa17.36■□□□□ 0.37
ABCA2-212ENST00000464876 UNC13BO14795 1591 aa17.36■□□□□ 0.37
ABCA2-212ENST00000464876 ERVK-7P63135 1459 aa17.36■□□□□ 0.37
ABCA2-212ENST00000464876 FSD2A1L4K1 749 aa17.35■□□□□ 0.37
ABCA2-212ENST00000464876 AAMPQ13685 434 aa17.35■□□□□ 0.37
ABCA2-212ENST00000464876 LAMC1P11047 1609 aa17.35■□□□□ 0.37
ABCA2-212ENST00000464876 ESPNB1AK53 854 aa17.35■□□□□ 0.37
ABCA2-212ENST00000464876 STAC3Q96MF2 364 aa17.35■□□□□ 0.37
ABCA2-212ENST00000464876 ATP10AO60312 1499 aa17.35■□□□□ 0.37
ABCA2-212ENST00000464876 GBP4Q96PP9 640 aa17.35■□□□□ 0.37
ABCA2-212ENST00000464876 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
ABCA2-212ENST00000464876 RIPK4P57078 832 aa17.34■□□□□ 0.37
ABCA2-212ENST00000464876 CLCN1P35523 988 aa17.34■□□□□ 0.37
ABCA2-212ENST00000464876 RBM42Q9BTD8 480 aaKnown RBP17.34■□□□□ 0.37
ABCA2-212ENST00000464876 MADDQ8WXG6 1647 aa17.33■□□□□ 0.36
ABCA2-212ENST00000464876 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
ABCA2-212ENST00000464876 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
ABCA2-212ENST00000464876 APBB1O00213 710 aa17.31■□□□□ 0.36
ABCA2-212ENST00000464876 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
ABCA2-212ENST00000464876 GAS2L3Q86XJ1 694 aa17.31■□□□□ 0.36
ABCA2-212ENST00000464876 ASXL2Q76L83 1435 aa17.31■□□□□ 0.36
ABCA2-212ENST00000464876 IPO8O15397 1037 aaKnown RBP17.3■□□□□ 0.36
ABCA2-212ENST00000464876 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
ABCA2-212ENST00000464876 NOS1P29475 1434 aa17.29■□□□□ 0.36
ABCA2-212ENST00000464876 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
ABCA2-212ENST00000464876 GOLGA6L22H0YM25 854 aa17.28■□□□□ 0.36
ABCA2-212ENST00000464876 CHD1LQ86WJ1 897 aa17.28■□□□□ 0.36
ABCA2-212ENST00000464876 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
ABCA2-212ENST00000464876 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
ABCA2-212ENST00000464876 FBLN1P23142 703 aa17.28■□□□□ 0.36
ABCA2-212ENST00000464876 ARID3AQ99856 593 aa17.28■□□□□ 0.36
ABCA2-212ENST00000464876 SSFA2P28290 1259 aa17.28■□□□□ 0.36
ABCA2-212ENST00000464876 RNF17Q9BXT8 1623 aaKnown RBP17.27■□□□□ 0.36
ABCA2-212ENST00000464876 PTPRTO14522 1441 aa17.27■□□□□ 0.36
ABCA2-212ENST00000464876 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.36
ABCA2-212ENST00000464876 HDAC1Q13547 482 aaPredicted RBP17.27■□□□□ 0.36
ABCA2-212ENST00000464876 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
ABCA2-212ENST00000464876 RAPGEF3O95398 923 aa17.26■□□□□ 0.35
ABCA2-212ENST00000464876 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
ABCA2-212ENST00000464876 FANCAO15360 1455 aa17.26■□□□□ 0.35
ABCA2-212ENST00000464876 SMC5Q8IY18 1101 aa17.26■□□□□ 0.35
ABCA2-212ENST00000464876 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
ABCA2-212ENST00000464876 UHRF1BP1LA0JNW5 1464 aa17.26■□□□□ 0.35
ABCA2-212ENST00000464876 EVC2Q86UK5 1308 aa17.26■□□□□ 0.35
ABCA2-212ENST00000464876 CCDC27Q2M243 656 aa17.25■□□□□ 0.35
ABCA2-212ENST00000464876 FOXD4L5Q5VV16 416 aaPredicted RBP17.25■□□□□ 0.35
ABCA2-212ENST00000464876 FOXD4L4Q8WXT5 416 aaPredicted RBP17.25■□□□□ 0.35
ABCA2-212ENST00000464876 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
ABCA2-212ENST00000464876 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
ABCA2-212ENST00000464876 CLTCL1P53675 1640 aa17.25■□□□□ 0.35
ABCA2-212ENST00000464876 HMOX1P09601 288 aa17.24■□□□□ 0.35
ABCA2-212ENST00000464876 ZBTB40Q9NUA8 1239 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms