RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 MVPQ14764 893 aaKnown RBP15.96■□□□□ 0.15
CLCNKA-204ENST00000464764 FTSJ3Q8IY81 847 aaKnown RBP15.96■□□□□ 0.15
CLCNKA-204ENST00000464764 PLXNC1O60486 1568 aa15.96■□□□□ 0.15
CLCNKA-204ENST00000464764 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.14
CLCNKA-204ENST00000464764 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-204ENST00000464764 CHGAP10645 457 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-204ENST00000464764 CHMP5Q9NZZ3 219 aa15.95■□□□□ 0.14
CLCNKA-204ENST00000464764 KIF3BO15066 747 aa15.94■□□□□ 0.14
CLCNKA-204ENST00000464764 WDR63Q8IWG1 891 aa15.94■□□□□ 0.14
CLCNKA-204ENST00000464764 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
CLCNKA-204ENST00000464764 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
CLCNKA-204ENST00000464764 DZIP1LQ8IYY4 767 aaKnown RBP15.94■□□□□ 0.14
CLCNKA-204ENST00000464764 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
CLCNKA-204ENST00000464764 CLTCL1P53675 1640 aa15.94■□□□□ 0.14
CLCNKA-204ENST00000464764 TMEM132EQ6IEE7 984 aa15.93■□□□□ 0.14
CLCNKA-204ENST00000464764 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
CLCNKA-204ENST00000464764 ZKSCAN2Q63HK3 967 aa15.93■□□□□ 0.14
CLCNKA-204ENST00000464764 UGGT1Q9NYU2 1555 aa15.93■□□□□ 0.14
CLCNKA-204ENST00000464764 KDM5AP29375 1690 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-204ENST00000464764 ITPRIPQ8IWB1 547 aa15.92■□□□□ 0.14
CLCNKA-204ENST00000464764 RTEL1-TNFRSF6BF6WH68 1400 aa15.92■□□□□ 0.14
CLCNKA-204ENST00000464764 SMC4Q9NTJ3 1288 aa15.92■□□□□ 0.14
CLCNKA-204ENST00000464764 PTPRTO14522 1441 aa15.92■□□□□ 0.14
CLCNKA-204ENST00000464764 TRIM27P14373 513 aa15.91■□□□□ 0.14
CLCNKA-204ENST00000464764 EXOSC9Q06265 439 aaKnown RBP15.91■□□□□ 0.14
CLCNKA-204ENST00000464764 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
CLCNKA-204ENST00000464764 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-204ENST00000464764 TRPM2O94759 1503 aa15.91■□□□□ 0.14
CLCNKA-204ENST00000464764 CEP152O94986 1710 aa15.9■□□□□ 0.14
CLCNKA-204ENST00000464764 STAC3Q96MF2 364 aa15.9■□□□□ 0.14
CLCNKA-204ENST00000464764 SPHKAPQ2M3C7 1700 aa15.9■□□□□ 0.14
CLCNKA-204ENST00000464764 CLCN1P35523 988 aa15.9■□□□□ 0.14
CLCNKA-204ENST00000464764 SSH1Q8WYL5 1049 aa15.9■□□□□ 0.14
CLCNKA-204ENST00000464764 PLCH2O75038 1416 aa15.9■□□□□ 0.14
CLCNKA-204ENST00000464764 ERBB4Q15303 1308 aa15.9■□□□□ 0.14
CLCNKA-204ENST00000464764 MYH16Q9H6N6 1097 aa15.89■□□□□ 0.13
CLCNKA-204ENST00000464764 GAS2L3Q86XJ1 694 aa15.89■□□□□ 0.13
CLCNKA-204ENST00000464764 HSCBQ8IWL3 235 aa15.89■□□□□ 0.13
CLCNKA-204ENST00000464764 GRPEL1Q9HAV7 217 aa15.89■□□□□ 0.13
CLCNKA-204ENST00000464764 AAMPQ13685 434 aa15.88■□□□□ 0.13
CLCNKA-204ENST00000464764 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
CLCNKA-204ENST00000464764 LNPKQ9C0E8 428 aa15.88■□□□□ 0.13
CLCNKA-204ENST00000464764 NOB1Q9ULX3 412 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-204ENST00000464764 MRE11P49959 708 aa15.87■□□□□ 0.13
CLCNKA-204ENST00000464764 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
CLCNKA-204ENST00000464764 TMEM57Q8N5G2 664 aa15.87■□□□□ 0.13
CLCNKA-204ENST00000464764 IQSEC2Q5JU85 1478 aa15.87■□□□□ 0.13
CLCNKA-204ENST00000464764 TNPO1Q92973 898 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-204ENST00000464764 ERCC6L2Q5T890 1561 aa15.86■□□□□ 0.13
CLCNKA-204ENST00000464764 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
CLCNKA-204ENST00000464764 SAFB2Q14151 953 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLCNKA-204ENST00000464764 CCDC27Q2M243 656 aa15.86■□□□□ 0.13
CLCNKA-204ENST00000464764 SHPRHQ149N8 1683 aa15.85■□□□□ 0.13
CLCNKA-204ENST00000464764 CD2BP2O95400 341 aaKnown RBP15.85■□□□□ 0.13
CLCNKA-204ENST00000464764 HDAC1Q13547 482 aaPredicted RBP15.84■□□□□ 0.13
CLCNKA-204ENST00000464764 SLC24A1O60721 1099 aa15.83■□□□□ 0.13
CLCNKA-204ENST00000464764 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.13
CLCNKA-204ENST00000464764 ZMYM3Q14202 1370 aa15.83■□□□□ 0.13
CLCNKA-204ENST00000464764 ESPNB1AK53 854 aa15.83■□□□□ 0.12
CLCNKA-204ENST00000464764 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
CLCNKA-204ENST00000464764 ABCA6Q8N139 1617 aa15.83■□□□□ 0.12
CLCNKA-204ENST00000464764 SMC5Q8IY18 1101 aa15.83■□□□□ 0.12
CLCNKA-204ENST00000464764 TRIM35Q9UPQ4 493 aa15.83■□□□□ 0.12
CLCNKA-204ENST00000464764 DDIT3P35638 169 aa15.82■□□□□ 0.12
CLCNKA-204ENST00000464764 VSIG10Q8N0Z9 540 aa15.82■□□□□ 0.12
CLCNKA-204ENST00000464764 KANK1Q14678 1352 aa15.82■□□□□ 0.12
CLCNKA-204ENST00000464764 ZNF518AQ6AHZ1 1483 aa15.82■□□□□ 0.12
CLCNKA-204ENST00000464764 NOS1P29475 1434 aa15.82■□□□□ 0.12
CLCNKA-204ENST00000464764 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
CLCNKA-204ENST00000464764 DDX19BQ9UMR2 479 aa15.82■□□□□ 0.12
CLCNKA-204ENST00000464764 DDX11L8A8MPP1 907 aa15.81■□□□□ 0.12
CLCNKA-204ENST00000464764 HSP90AA1P07900 732 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-204ENST00000464764 HSP90AB1P08238 724 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-204ENST00000464764 TMPOP42166 694 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-204ENST00000464764 ZBTB40Q9NUA8 1239 aa15.81■□□□□ 0.12
CLCNKA-204ENST00000464764 ABCC1P33527 1531 aa15.81■□□□□ 0.12
CLCNKA-204ENST00000464764 HSP90AA2PQ14568 343 aaPredicted RBP15.81■□□□□ 0.12
CLCNKA-204ENST00000464764 GGNBP2Q9H3C7 697 aa15.8■□□□□ 0.12
CLCNKA-204ENST00000464764 C1orf115Q9H7X2 142 aa15.8■□□□□ 0.12
CLCNKA-204ENST00000464764 KIF2CQ99661 725 aa15.79■□□□□ 0.12
CLCNKA-204ENST00000464764 MAP3K4Q9Y6R4 1608 aa15.79■□□□□ 0.12
CLCNKA-204ENST00000464764 RBM25P49756 843 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-204ENST00000464764 CD109Q6YHK3 1445 aa15.78■□□□□ 0.12
CLCNKA-204ENST00000464764 NUCB1Q02818 461 aa15.78■□□□□ 0.12
CLCNKA-204ENST00000464764 PLEKHF1Q96S99 279 aa15.78■□□□□ 0.12
CLCNKA-204ENST00000464764 RIPK4P57078 832 aa15.77■□□□□ 0.12
CLCNKA-204ENST00000464764 ANKRD45Q5TZF3 282 aa15.77■□□□□ 0.12
CLCNKA-204ENST00000464764 CHD1LQ86WJ1 897 aa15.77■□□□□ 0.12
CLCNKA-204ENST00000464764 TRIM44Q96DX7 344 aaPredicted RBP15.77■□□□□ 0.12
CLCNKA-204ENST00000464764 C14orf93Q9H972 538 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-204ENST00000464764 SSFA2P28290 1259 aa15.76■□□□□ 0.11
CLCNKA-204ENST00000464764 RAB3GAP1Q15042 981 aa15.76■□□□□ 0.11
CLCNKA-204ENST00000464764 SBNO2Q9Y2G9 1366 aa15.76■□□□□ 0.11
CLCNKA-204ENST00000464764 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
CLCNKA-204ENST00000464764 SNX21Q969T3 373 aa15.76■□□□□ 0.11
CLCNKA-204ENST00000464764 NCOA3Q9Y6Q9 1424 aa15.75■□□□□ 0.11
CLCNKA-204ENST00000464764 FBLN1P23142 703 aa15.75■□□□□ 0.11
CLCNKA-204ENST00000464764 MYOM2P54296 1465 aa15.75■□□□□ 0.11
CLCNKA-204ENST00000464764 GAS2L2Q8NHY3 880 aa15.74■□□□□ 0.11
CLCNKA-204ENST00000464764 KIAA1210Q9ULL0 1709 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms