RNA–Protein interactions for RNA: ENST00000464748.1

CDK11A-211, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-211ENST00000464748 TRAK1Q9UPV9 953 aa28.7■■■□□ 2.18
CDK11A-211ENST00000464748 PLEKHH1Q9ULM0 1364 aa28.69■■■□□ 2.18
CDK11A-211ENST00000464748 ARHGEF28Q8N1W1 1705 aaKnown RBP28.69■■■□□ 2.18
CDK11A-211ENST00000464748 ROBO1Q9Y6N7 1651 aa28.68■■■□□ 2.18
CDK11A-211ENST00000464748 PRAM1Q96QH2 718 aa28.68■■■□□ 2.18
CDK11A-211ENST00000464748 POGKQ9P215 609 aa28.68■■■□□ 2.18
CDK11A-211ENST00000464748 NBPF1Q3BBV0 1214 aa28.67■■■□□ 2.18
CDK11A-211ENST00000464748 MST1RQ04912 1400 aa28.67■■■□□ 2.18
CDK11A-211ENST00000464748 ROCK2O75116 1388 aaKnown RBP28.64■■■□□ 2.18
CDK11A-211ENST00000464748 NBPF8Q3BBV2 869 aa28.63■■■□□ 2.17
CDK11A-211ENST00000464748 ADGRB2O60241 1585 aa28.62■■■□□ 2.17
CDK11A-211ENST00000464748 RALGAPBQ86X10 1494 aa28.61■■■□□ 2.17
CDK11A-211ENST00000464748 GPRASP1Q5JY77 1395 aa28.61■■■□□ 2.17
CDK11A-211ENST00000464748 C1orf167Q5SNV9 1468 aa28.59■■■□□ 2.17
CDK11A-211ENST00000464748 FMN2Q9NZ56 1722 aa28.58■■■□□ 2.17
CDK11A-211ENST00000464748 HSPA1LP34931 641 aa28.57■■■□□ 2.16
CDK11A-211ENST00000464748 SAFB2Q14151 953 aaKnown RBP eCLIP28.57■■■□□ 2.16
CDK11A-211ENST00000464748 EIF3AQ14152 1382 aaKnown RBP28.55■■■□□ 2.16
CDK11A-211ENST00000464748 BRINP3Q76B58 766 aa28.55■■■□□ 2.16
CDK11A-211ENST00000464748 AHDC1Q5TGY3 1603 aaPredicted RBP28.54■■■□□ 2.16
CDK11A-211ENST00000464748 PHLPP1O60346 1717 aa28.52■■■□□ 2.16
CDK11A-211ENST00000464748 CENPJQ9HC77 1338 aaPredicted RBP28.51■■■□□ 2.15
CDK11A-211ENST00000464748 MINK1Q8N4C8 1332 aaPredicted RBP28.5■■■□□ 2.15
CDK11A-211ENST00000464748 CARD11Q9BXL7 1154 aa28.5■■■□□ 2.15
CDK11A-211ENST00000464748 NHSL1Q5SYE7 1610 aa28.5■■■□□ 2.15
CDK11A-211ENST00000464748 ANKARQ7Z5J8 1434 aa28.49■■■□□ 2.15
CDK11A-211ENST00000464748 QRICH2Q9H0J4 1663 aa28.48■■■□□ 2.15
CDK11A-211ENST00000464748 WASLO00401 505 aaPredicted RBP28.46■■■□□ 2.15
CDK11A-211ENST00000464748 HIRIP3Q9BW71 556 aaPredicted RBP28.46■■■□□ 2.15
CDK11A-211ENST00000464748 KIF1AQ12756 1690 aa28.45■■■□□ 2.15
CDK11A-211ENST00000464748 TULP4Q9NRJ4 1543 aa28.45■■■□□ 2.15
CDK11A-211ENST00000464748 COL16A1Q07092 1604 aaPredicted RBP28.44■■■□□ 2.14
CDK11A-211ENST00000464748 ESCO1Q5FWF5 840 aa28.44■■■□□ 2.14
CDK11A-211ENST00000464748 ORAI2Q96SN7 254 aa28.43■■■□□ 2.14
CDK11A-211ENST00000464748 NUTM2FA1L443 756 aa28.41■■■□□ 2.14
CDK11A-211ENST00000464748 RGPD8O14715 1765 aaPredicted RBP28.41■■■□□ 2.14
CDK11A-211ENST00000464748 USP32Q8NFA0 1604 aa28.4■■■□□ 2.14
CDK11A-211ENST00000464748 SBNO2Q9Y2G9 1366 aa28.39■■■□□ 2.14
CDK11A-211ENST00000464748 NPHP3Q7Z494 1330 aa28.39■■■□□ 2.13
CDK11A-211ENST00000464748 ITSN1Q15811 1721 aa28.38■■■□□ 2.13
CDK11A-211ENST00000464748 CDK19Q9BWU1 502 aa28.36■■■□□ 2.13
CDK11A-211ENST00000464748 JCADQ9P266 1359 aa28.36■■■□□ 2.13
CDK11A-211ENST00000464748 PHF8Q9UPP1 1060 aa28.35■■■□□ 2.13
CDK11A-211ENST00000464748 ATP7BP35670 1465 aa28.34■■■□□ 2.13
CDK11A-211ENST00000464748 SOS2Q07890 1332 aaPredicted RBP28.34■■■□□ 2.13
CDK11A-211ENST00000464748 EVC2Q86UK5 1308 aa28.34■■■□□ 2.13
CDK11A-211ENST00000464748 PRR36Q9H6K5 1346 aa28.33■■■□□ 2.13
CDK11A-211ENST00000464748 LRRC59Q96AG4 307 aaKnown RBP28.32■■■□□ 2.12
CDK11A-211ENST00000464748 SHPRHQ149N8 1683 aa28.32■■■□□ 2.12
CDK11A-211ENST00000464748 SLC24A1O60721 1099 aa28.31■■■□□ 2.12
CDK11A-211ENST00000464748 NUDT16Q96DE0 195 aaKnown RBP28.31■■■□□ 2.12
CDK11A-211ENST00000464748 TOPAZ1Q8N9V7 1692 aa28.3■■■□□ 2.12
CDK11A-211ENST00000464748 FOXO3O43524 673 aa28.3■■■□□ 2.12
CDK11A-211ENST00000464748 DDX17Q92841 729 aaKnown RBP28.3■■■□□ 2.12
CDK11A-211ENST00000464748 PXDNQ92626 1479 aa28.29■■■□□ 2.12
CDK11A-211ENST00000464748 SRPK2P78362 688 aaKnown RBP28.29■■■□□ 2.12
CDK11A-211ENST00000464748 USP47Q96K76 1375 aa28.28■■■□□ 2.12
CDK11A-211ENST00000464748 CCDC61Q9Y6R9 512 aa28.28■■■□□ 2.12
CDK11A-211ENST00000464748 SPATA31A6Q5VVP1 1343 aa28.25■■■□□ 2.11
CDK11A-211ENST00000464748 PSME1Q06323 249 aa28.24■■■□□ 2.11
CDK11A-211ENST00000464748 ST20-MTHFSA0A0A6YYL1 179 aa28.23■■■□□ 2.11
CDK11A-211ENST00000464748 PMFBP1Q8TBY8 1022 aa28.23■■■□□ 2.11
CDK11A-211ENST00000464748 CABP2Q9NPB3 220 aa28.23■■■□□ 2.11
CDK11A-211ENST00000464748 MED1Q15648 1581 aaPredicted RBP28.22■■■□□ 2.11
CDK11A-211ENST00000464748 KRT28Q7Z3Y7 464 aa28.22■■■□□ 2.11
CDK11A-211ENST00000464748 ATAD2Q6PL18 1390 aa28.22■■■□□ 2.11
CDK11A-211ENST00000464748 PLEKHG3A1L390 1219 aa28.21■■■□□ 2.11
CDK11A-211ENST00000464748 NGDNQ8NEJ9 315 aaKnown RBP28.21■■■□□ 2.11
CDK11A-211ENST00000464748 SBNO1A3KN83 1393 aa28.21■■■□□ 2.11
CDK11A-211ENST00000464748 PNPLA6Q8IY17 1366 aa28.21■■■□□ 2.11
CDK11A-211ENST00000464748 PPIP5K1Q6PFW1 1433 aa28.19■■■□□ 2.1
CDK11A-211ENST00000464748 PUS7Q96PZ0 661 aaKnown RBP28.19■■■□□ 2.1
CDK11A-211ENST00000464748 TESK2Q96S53 571 aa28.19■■■□□ 2.1
CDK11A-211ENST00000464748 POLR3AO14802 1390 aaPredicted RBP28.19■■■□□ 2.1
CDK11A-211ENST00000464748 XPCQ01831 940 aaPredicted RBP28.18■■■□□ 2.1
CDK11A-211ENST00000464748 COL22A1Q8NFW1 1626 aaPredicted RBP28.18■■■□□ 2.1
CDK11A-211ENST00000464748 TNS3Q68CZ2 1445 aa28.17■■■□□ 2.1
CDK11A-211ENST00000464748 SPATA31A3Q5VYP0 1347 aa28.17■■■□□ 2.1
CDK11A-211ENST00000464748 TRPM3Q9HCF6 1732 aaPredicted RBP28.15■■■□□ 2.1
CDK11A-211ENST00000464748 ACEP12821 1306 aa28.14■■■□□ 2.09
CDK11A-211ENST00000464748 ARHGEF10O15013 1369 aa28.12■■■□□ 2.09
CDK11A-211ENST00000464748 TMF1P82094 1093 aa28.12■■■□□ 2.09
CDK11A-211ENST00000464748 BRD4O60885 1362 aaPredicted RBP28.11■■■□□ 2.09
CDK11A-211ENST00000464748 EIF4G2P78344 907 aaKnown RBP eCLIP28.11■■■□□ 2.09
CDK11A-211ENST00000464748 CABP1Q9NZU7 370 aa28.1■■■□□ 2.09
CDK11A-211ENST00000464748 CDCA8Q53HL2 280 aa28.09■■■□□ 2.09
CDK11A-211ENST00000464748 ALS2Q96Q42 1657 aa28.09■■■□□ 2.09
CDK11A-211ENST00000464748 LRP6O75581 1613 aa28.08■■■□□ 2.09
CDK11A-211ENST00000464748 NINLQ9Y2I6 1382 aa28.08■■■□□ 2.09
CDK11A-211ENST00000464748 AKAP12Q02952 1782 aa28.05■■■□□ 2.08
CDK11A-211ENST00000464748 ZNF692Q9BU19 519 aaPredicted RBP28.05■■■□□ 2.08
CDK11A-211ENST00000464748 DISP3Q9P2K9 1392 aa28.05■■■□□ 2.08
CDK11A-211ENST00000464748 NUTM2BA6NNL0 878 aaPredicted RBP28.04■■■□□ 2.08
CDK11A-211ENST00000464748 NUTM2EB1AL46 878 aaPredicted RBP28.04■■■□□ 2.08
CDK11A-211ENST00000464748 NUTM2AQ8IVF1 878 aaPredicted RBP28.04■■■□□ 2.08
CDK11A-211ENST00000464748 PHF23Q9BUL5 403 aaPredicted RBP28.04■■■□□ 2.08
CDK11A-211ENST00000464748 USP6P35125 1406 aa28.03■■■□□ 2.08
CDK11A-211ENST00000464748 MEX3CQ5U5Q3 659 aaKnown RBP28.03■■■□□ 2.08
CDK11A-211ENST00000464748 PAK3O75914 559 aaPredicted RBP28.02■■■□□ 2.08
CDK11A-211ENST00000464748 LMOD2Q6P5Q4 547 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms