RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 SPATA31E1Q6ZUB1 1445 aa20.36■□□□□ 0.85
RPP40-203ENST00000464646 PNPLA6Q8IY17 1366 aa20.34■□□□□ 0.85
RPP40-203ENST00000464646 IFT172Q9UG01 1749 aa20.34■□□□□ 0.85
RPP40-203ENST00000464646 NGLY1Q96IV0 654 aa20.34■□□□□ 0.85
RPP40-203ENST00000464646 XPCQ01831 940 aaPredicted RBP20.33■□□□□ 0.85
RPP40-203ENST00000464646 LRPPRCP42704 1394 aaKnown RBP20.33■□□□□ 0.84
RPP40-203ENST00000464646 SAFB2Q14151 953 aaKnown RBP eCLIP20.31■□□□□ 0.84
RPP40-203ENST00000464646 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
RPP40-203ENST00000464646 FOXO3O43524 673 aa20.3■□□□□ 0.84
RPP40-203ENST00000464646 CFAP70Q5T0N1 1121 aa20.3■□□□□ 0.84
RPP40-203ENST00000464646 NPHP3Q7Z494 1330 aa20.29■□□□□ 0.84
RPP40-203ENST00000464646 PIK3C2GO75747 1445 aa20.29■□□□□ 0.84
RPP40-203ENST00000464646 QTRT2Q9H974 415 aaKnown RBP20.29■□□□□ 0.84
RPP40-203ENST00000464646 PLEKHH1Q9ULM0 1364 aa20.29■□□□□ 0.84
RPP40-203ENST00000464646 SOS2Q07890 1332 aaPredicted RBP20.28■□□□□ 0.84
RPP40-203ENST00000464646 YTHDC2Q9H6S0 1430 aaKnown RBP20.28■□□□□ 0.84
RPP40-203ENST00000464646 DHX57Q6P158 1386 aaKnown RBP20.28■□□□□ 0.84
RPP40-203ENST00000464646 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
RPP40-203ENST00000464646 CDC42BPGQ6DT37 1551 aa20.27■□□□□ 0.84
RPP40-203ENST00000464646 ABCC11Q96J66 1382 aa20.27■□□□□ 0.84
RPP40-203ENST00000464646 PLEKHG5O94827 1062 aa20.27■□□□□ 0.84
RPP40-203ENST00000464646 POGKQ9P215 609 aa20.27■□□□□ 0.84
RPP40-203ENST00000464646 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
RPP40-203ENST00000464646 KNDC1Q76NI1 1749 aa20.25■□□□□ 0.83
RPP40-203ENST00000464646 TECPR2O15040 1411 aa20.23■□□□□ 0.83
RPP40-203ENST00000464646 DCAF11Q8TEB1 546 aa20.23■□□□□ 0.83
RPP40-203ENST00000464646 PRAM1Q96QH2 718 aa20.23■□□□□ 0.83
RPP40-203ENST00000464646 USP21Q9UK80 565 aa20.23■□□□□ 0.83
RPP40-203ENST00000464646 HAP1P54257 671 aaPredicted RBP20.22■□□□□ 0.83
RPP40-203ENST00000464646 RBM6P78332 1123 aaKnown RBP20.22■□□□□ 0.83
RPP40-203ENST00000464646 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
RPP40-203ENST00000464646 LAMC1P11047 1609 aa20.2■□□□□ 0.82
RPP40-203ENST00000464646 MYOM2P54296 1465 aa20.2■□□□□ 0.82
RPP40-203ENST00000464646 TRAK1Q9UPV9 953 aa20.2■□□□□ 0.82
RPP40-203ENST00000464646 FMN2Q9NZ56 1722 aa20.19■□□□□ 0.82
RPP40-203ENST00000464646 KRT28Q7Z3Y7 464 aa20.19■□□□□ 0.82
RPP40-203ENST00000464646 UPF1Q92900 1129 aaKnown RBP eCLIP20.18■□□□□ 0.82
RPP40-203ENST00000464646 RGPD8O14715 1765 aaPredicted RBP20.18■□□□□ 0.82
RPP40-203ENST00000464646 SIRT1Q96EB6 747 aa20.17■□□□□ 0.82
RPP40-203ENST00000464646 TRPC5Q9UL62 973 aaPredicted RBP20.17■□□□□ 0.82
RPP40-203ENST00000464646 PHF8Q9UPP1 1060 aa20.17■□□□□ 0.82
RPP40-203ENST00000464646 PSME1Q06323 249 aa20.16■□□□□ 0.82
RPP40-203ENST00000464646 HIRIP3Q9BW71 556 aaPredicted RBP20.16■□□□□ 0.82
RPP40-203ENST00000464646 PXDNQ92626 1479 aa20.16■□□□□ 0.82
RPP40-203ENST00000464646 PMFBP1Q8TBY8 1022 aa20.15■□□□□ 0.82
RPP40-203ENST00000464646 MINK1Q8N4C8 1332 aaPredicted RBP20.15■□□□□ 0.82
RPP40-203ENST00000464646 NRXN1Q9ULB1 1477 aa20.15■□□□□ 0.82
RPP40-203ENST00000464646 KIF1AQ12756 1690 aa20.14■□□□□ 0.81
RPP40-203ENST00000464646 CDK12Q9NYV4 1490 aaPredicted RBP20.13■□□□□ 0.81
RPP40-203ENST00000464646 RGS12O14924 1447 aa20.13■□□□□ 0.81
RPP40-203ENST00000464646 COL22A1Q8NFW1 1626 aaPredicted RBP20.13■□□□□ 0.81
RPP40-203ENST00000464646 SPATA31A3Q5VYP0 1347 aa20.11■□□□□ 0.81
RPP40-203ENST00000464646 HRCP23327 699 aa20.1■□□□□ 0.81
RPP40-203ENST00000464646 FNBP4Q8N3X1 1017 aaPredicted RBP20.1■□□□□ 0.81
RPP40-203ENST00000464646 CABLES1Q8TDN4 633 aa20.09■□□□□ 0.81
RPP40-203ENST00000464646 MARF1Q9Y4F3 1742 aaKnown RBP20.09■□□□□ 0.81
RPP40-203ENST00000464646 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
RPP40-203ENST00000464646 CCDC9Q9Y3X0 531 aaKnown RBP20.07■□□□□ 0.8
RPP40-203ENST00000464646 STAC3Q96MF2 364 aa20.06■□□□□ 0.8
RPP40-203ENST00000464646 TNS3Q68CZ2 1445 aa20.05■□□□□ 0.8
RPP40-203ENST00000464646 NGDNQ8NEJ9 315 aaKnown RBP20.05■□□□□ 0.8
RPP40-203ENST00000464646 ADGRB1O14514 1584 aa20.04■□□□□ 0.8
RPP40-203ENST00000464646 ATRNO75882 1429 aa20.04■□□□□ 0.8
RPP40-203ENST00000464646 PAK3O75914 559 aaPredicted RBP20.04■□□□□ 0.8
RPP40-203ENST00000464646 GPRASP1Q5JY77 1395 aa20.04■□□□□ 0.8
RPP40-203ENST00000464646 WASLO00401 505 aaPredicted RBP20.03■□□□□ 0.8
RPP40-203ENST00000464646 UNC5CLQ8IV45 518 aa20.03■□□□□ 0.8
RPP40-203ENST00000464646 GJD4Q96KN9 370 aaPredicted RBP20.03■□□□□ 0.8
RPP40-203ENST00000464646 EIF3AQ14152 1382 aaKnown RBP20.03■□□□□ 0.8
RPP40-203ENST00000464646 ATAD2Q6PL18 1390 aa20.03■□□□□ 0.8
RPP40-203ENST00000464646 ANKARQ7Z5J8 1434 aa20.02■□□□□ 0.8
RPP40-203ENST00000464646 BCL9LQ86UU0 1499 aa20.01■□□□□ 0.79
RPP40-203ENST00000464646 ARHGEF10O15013 1369 aa20.01■□□□□ 0.79
RPP40-203ENST00000464646 A0A0G2JS52 829 aa20.01■□□□□ 0.79
RPP40-203ENST00000464646 MYT1Q01538 1121 aa20.01■□□□□ 0.79
RPP40-203ENST00000464646 SBNO1A3KN83 1393 aa20■□□□□ 0.79
RPP40-203ENST00000464646 USP32Q8NFA0 1604 aa20■□□□□ 0.79
RPP40-203ENST00000464646 ADGRB2O60241 1585 aa19.99■□□□□ 0.79
RPP40-203ENST00000464646 PRR36Q9H6K5 1346 aa19.98■□□□□ 0.79
RPP40-203ENST00000464646 TULP4Q9NRJ4 1543 aa19.97■□□□□ 0.79
RPP40-203ENST00000464646 ARHGEF28Q8N1W1 1705 aaKnown RBP19.96■□□□□ 0.79
RPP40-203ENST00000464646 NUDT16Q96DE0 195 aaKnown RBP19.96■□□□□ 0.79
RPP40-203ENST00000464646 CDK19Q9BWU1 502 aa19.95■□□□□ 0.78
RPP40-203ENST00000464646 SLIT2O94813 1529 aa19.94■□□□□ 0.78
RPP40-203ENST00000464646 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.93■□□□□ 0.78
RPP40-203ENST00000464646 RALGAPBQ86X10 1494 aa19.93■□□□□ 0.78
RPP40-203ENST00000464646 NEUROD1Q13562 356 aa19.93■□□□□ 0.78
RPP40-203ENST00000464646 NBPF1Q3BBV0 1214 aa19.93■□□□□ 0.78
RPP40-203ENST00000464646 PLCH1Q4KWH8 1693 aa19.93■□□□□ 0.78
RPP40-203ENST00000464646 FAM83GA6ND36 823 aa19.92■□□□□ 0.78
RPP40-203ENST00000464646 NUTM2GQ5VZR2 741 aa19.92■□□□□ 0.78
RPP40-203ENST00000464646 ITSN1Q15811 1721 aa19.91■□□□□ 0.78
RPP40-203ENST00000464646 ABCA3Q99758 1704 aa19.91■□□□□ 0.78
RPP40-203ENST00000464646 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
RPP40-203ENST00000464646 VPS72Q15906 364 aa19.91■□□□□ 0.78
RPP40-203ENST00000464646 SEPT12Q8IYM1 358 aa19.91■□□□□ 0.78
RPP40-203ENST00000464646 BTG4Q9NY30 223 aa19.91■□□□□ 0.78
RPP40-203ENST00000464646 TRPM3Q9HCF6 1732 aaPredicted RBP19.9■□□□□ 0.78
RPP40-203ENST00000464646 GLI3P10071 1580 aa19.89■□□□□ 0.77
RPP40-203ENST00000464646 SF3B2Q13435 895 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms