RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-209	ENST00000464576	MPHOSPH9	Q99550	1183 aa		14.01	□□□□□ -0.17
PTPN18-209	ENST00000464576	LRPPRC	P42704	1394 aa	Known RBP	14	□□□□□ -0.17
PTPN18-209	ENST00000464576	ANKRD30B	Q9BXX2	1392 aa		14	□□□□□ -0.17
PTPN18-209	ENST00000464576	SOS2	Q07890	1332 aa	Predicted RBP	14	□□□□□ -0.17
PTPN18-209	ENST00000464576	USP21	Q9UK80	565 aa		14	□□□□□ -0.17
PTPN18-209	ENST00000464576	ADGRF5	Q8IZF2	1346 aa		13.99	□□□□□ -0.17
PTPN18-209	ENST00000464576	NUTM2F	A1L443	756 aa		13.99	□□□□□ -0.17
PTPN18-209	ENST00000464576	LAMC1	P11047	1609 aa		13.98	□□□□□ -0.17
PTPN18-209	ENST00000464576	FOXO3	O43524	673 aa		13.98	□□□□□ -0.17
PTPN18-209	ENST00000464576	WAPL	Q7Z5K2	1190 aa		13.98	□□□□□ -0.17
PTPN18-209	ENST00000464576	TRPC5	Q9UL62	973 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN18-209	ENST00000464576	PRAG1	Q86YV5	1406 aa		13.98	□□□□□ -0.17
PTPN18-209	ENST00000464576	TMEM132E	Q6IEE7	984 aa		13.97	□□□□□ -0.17
PTPN18-209	ENST00000464576	CDC42BPG	Q6DT37	1551 aa		13.96	□□□□□ -0.17
PTPN18-209	ENST00000464576	XPC	Q01831	940 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN18-209	ENST00000464576	HAP1	P54257	671 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPN18-209	ENST00000464576	RGS12	O14924	1447 aa		13.94	□□□□□ -0.18
PTPN18-209	ENST00000464576	IFT172	Q9UG01	1749 aa		13.94	□□□□□ -0.18
PTPN18-209	ENST00000464576	ATAD2	Q6PL18	1390 aa		13.94	□□□□□ -0.18
PTPN18-209	ENST00000464576	SPATA31E1	Q6ZUB1	1445 aa		13.93	□□□□□ -0.18
PTPN18-209	ENST00000464576	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN18-209	ENST00000464576	ABCC11	Q96J66	1382 aa		13.93	□□□□□ -0.18
PTPN18-209	ENST00000464576	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN18-209	ENST00000464576	PSME1	Q06323	249 aa		13.92	□□□□□ -0.18
PTPN18-209	ENST00000464576	DHX57	Q6P158	1386 aa	Known RBP	13.92	□□□□□ -0.18
PTPN18-209	ENST00000464576	KNDC1	Q76NI1	1749 aa		13.92	□□□□□ -0.18
PTPN18-209	ENST00000464576	TECPR2	O15040	1411 aa		13.91	□□□□□ -0.18
PTPN18-209	ENST00000464576	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.91	□□□□□ -0.18
PTPN18-209	ENST00000464576	MARF1	Q9Y4F3	1742 aa	Known RBP	13.91	□□□□□ -0.18
PTPN18-209	ENST00000464576	POGK	Q9P215	609 aa		13.91	□□□□□ -0.18
PTPN18-209	ENST00000464576	PIK3C2G	O75747	1445 aa		13.9	□□□□□ -0.18
PTPN18-209	ENST00000464576	LMOD2	Q6P5Q4	547 aa		13.9	□□□□□ -0.18
PTPN18-209	ENST00000464576	KRT28	Q7Z3Y7	464 aa		13.9	□□□□□ -0.18
PTPN18-209	ENST00000464576	PXDN	Q92626	1479 aa		13.9	□□□□□ -0.18
PTPN18-209	ENST00000464576	KIF1A	Q12756	1690 aa		13.9	□□□□□ -0.18
PTPN18-209	ENST00000464576	PLEKHH1	Q9ULM0	1364 aa		13.89	□□□□□ -0.19
PTPN18-209	ENST00000464576	PLEKHG5	O94827	1062 aa		13.89	□□□□□ -0.19
PTPN18-209	ENST00000464576	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
PTPN18-209	ENST00000464576	SIRT1	Q96EB6	747 aa		13.89	□□□□□ -0.19
PTPN18-209	ENST00000464576	C14orf93	Q9H972	538 aa	Known RBP	13.89	□□□□□ -0.19
PTPN18-209	ENST00000464576	FMN2	Q9NZ56	1722 aa		13.89	□□□□□ -0.19
PTPN18-209	ENST00000464576	MYOM2	P54296	1465 aa		13.88	□□□□□ -0.19
PTPN18-209	ENST00000464576	CFAP70	Q5T0N1	1121 aa		13.88	□□□□□ -0.19
PTPN18-209	ENST00000464576	PHF8	Q9UPP1	1060 aa		13.88	□□□□□ -0.19
PTPN18-209	ENST00000464576	ATRN	O75882	1429 aa		13.88	□□□□□ -0.19
PTPN18-209	ENST00000464576	RGPD8	O14715	1765 aa	Predicted RBP	13.87	□□□□□ -0.19
PTPN18-209	ENST00000464576	GJD4	Q96KN9	370 aa	Predicted RBP	13.87	□□□□□ -0.19
PTPN18-209	ENST00000464576	PRAM1	Q96QH2	718 aa		13.87	□□□□□ -0.19
PTPN18-209	ENST00000464576	SPATA31A3	Q5VYP0	1347 aa		13.87	□□□□□ -0.19
PTPN18-209	ENST00000464576	UNC5CL	Q8IV45	518 aa		13.86	□□□□□ -0.19
PTPN18-209	ENST00000464576	CCDC9	Q9Y3X0	531 aa	Known RBP	13.86	□□□□□ -0.19
PTPN18-209	ENST00000464576	EP400	Q96L91	3159 aa		13.85	□□□□□ -0.19
PTPN18-209	ENST00000464576	CCDC125	Q86Z20	511 aa		13.85	□□□□□ -0.19
PTPN18-209	ENST00000464576	KDM2A	Q9Y2K7	1162 aa		13.85	□□□□□ -0.19
PTPN18-209	ENST00000464576	ZRANB1	Q9UGI0	708 aa		13.84	□□□□□ -0.19
PTPN18-209	ENST00000464576	BCL9L	Q86UU0	1499 aa		13.84	□□□□□ -0.19
PTPN18-209	ENST00000464576	RAB3GAP2	Q9H2M9	1393 aa		13.83	□□□□□ -0.2
PTPN18-209	ENST00000464576	TNS3	Q68CZ2	1445 aa		13.82	□□□□□ -0.2
PTPN18-209	ENST00000464576	SF3B2	Q13435	895 aa	Known RBP	13.82	□□□□□ -0.2
PTPN18-209	ENST00000464576	PMFBP1	Q8TBY8	1022 aa		13.82	□□□□□ -0.2
PTPN18-209	ENST00000464576	DCAF11	Q8TEB1	546 aa		13.82	□□□□□ -0.2
PTPN18-209	ENST00000464576	TRAK1	Q9UPV9	953 aa		13.82	□□□□□ -0.2
PTPN18-209	ENST00000464576	ARHGEF10	O15013	1369 aa		13.82	□□□□□ -0.2
PTPN18-209	ENST00000464576	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.81	□□□□□ -0.2
PTPN18-209	ENST00000464576		A0A0G2JS52	829 aa		13.81	□□□□□ -0.2
PTPN18-209	ENST00000464576	MYT1	Q01538	1121 aa		13.81	□□□□□ -0.2
PTPN18-209	ENST00000464576	CABLES1	Q8TDN4	633 aa		13.81	□□□□□ -0.2
PTPN18-209	ENST00000464576	SRCAP	Q6ZRS2	3230 aa		13.81	□□□□□ -0.2
PTPN18-209	ENST00000464576	EIF3A	Q14152	1382 aa	Known RBP	13.81	□□□□□ -0.2
PTPN18-209	ENST00000464576	NRXN1	Q9ULB1	1477 aa		13.8	□□□□□ -0.2
PTPN18-209	ENST00000464576	USP32	Q8NFA0	1604 aa		13.8	□□□□□ -0.2
PTPN18-209	ENST00000464576	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.8	□□□□□ -0.2
PTPN18-209	ENST00000464576	GPRASP1	Q5JY77	1395 aa		13.8	□□□□□ -0.2
PTPN18-209	ENST00000464576	STAC3	Q96MF2	364 aa		13.79	□□□□□ -0.2
PTPN18-209	ENST00000464576	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.79	□□□□□ -0.2
PTPN18-209	ENST00000464576	SBNO1	A3KN83	1393 aa		13.79	□□□□□ -0.2
PTPN18-209	ENST00000464576	RALGAPB	Q86X10	1494 aa		13.79	□□□□□ -0.2
PTPN18-209	ENST00000464576	PAK3	O75914	559 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN18-209	ENST00000464576	NGDN	Q8NEJ9	315 aa	Known RBP	13.78	□□□□□ -0.2
PTPN18-209	ENST00000464576	ANKAR	Q7Z5J8	1434 aa		13.78	□□□□□ -0.2
PTPN18-209	ENST00000464576	SLIT2	O94813	1529 aa		13.78	□□□□□ -0.2
PTPN18-209	ENST00000464576	DLC1	Q96QB1	1528 aa		13.78	□□□□□ -0.2
PTPN18-209	ENST00000464576	VPS72	Q15906	364 aa		13.77	□□□□□ -0.21
PTPN18-209	ENST00000464576	SEPT12	Q8IYM1	358 aa		13.77	□□□□□ -0.21
PTPN18-209	ENST00000464576	NWD2	Q9ULI1	1742 aa		13.76	□□□□□ -0.21
PTPN18-209	ENST00000464576	PLCH1	Q4KWH8	1693 aa		13.76	□□□□□ -0.21
PTPN18-209	ENST00000464576	BRWD3	Q6RI45	1802 aa		13.75	□□□□□ -0.21
PTPN18-209	ENST00000464576	GLI3	P10071	1580 aa		13.75	□□□□□ -0.21
PTPN18-209	ENST00000464576	WASL	O00401	505 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN18-209	ENST00000464576	BLM	P54132	1417 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN18-209	ENST00000464576	FAM83G	A6ND36	823 aa		13.73	□□□□□ -0.21
PTPN18-209	ENST00000464576	KRT27	Q7Z3Y8	459 aa		13.73	□□□□□ -0.21
PTPN18-209	ENST00000464576	BTG4	Q9NY30	223 aa		13.73	□□□□□ -0.21
PTPN18-209	ENST00000464576	ADGRB2	O60241	1585 aa		13.73	□□□□□ -0.21
PTPN18-209	ENST00000464576	ABCA3	Q99758	1704 aa		13.73	□□□□□ -0.21
PTPN18-209	ENST00000464576	ADGRB1	O14514	1584 aa		13.71	□□□□□ -0.21
PTPN18-209	ENST00000464576	TULP4	Q9NRJ4	1543 aa		13.71	□□□□□ -0.21
PTPN18-209	ENST00000464576	ITSN1	Q15811	1721 aa		13.71	□□□□□ -0.21
PTPN18-209	ENST00000464576	HRC	P23327	699 aa		13.71	□□□□□ -0.21
PTPN18-209	ENST00000464576	FAM98C	Q17RN3	349 aa	Known RBP	13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms