RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 RSPH4AQ5TD94 716 aa9.66□□□□□ -0.86
PTPN12-210ENST00000464313 RDH13Q8NBN7 331 aa9.66□□□□□ -0.86
PTPN12-210ENST00000464313 MORN1Q5T089 497 aa9.64□□□□□ -0.87
PTPN12-210ENST00000464313 GMPRP36959 345 aa9.63□□□□□ -0.87
PTPN12-210ENST00000464313 FUT2Q10981 343 aa9.63□□□□□ -0.87
PTPN12-210ENST00000464313 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
PTPN12-210ENST00000464313 FCF1Q9Y324 198 aaKnown RBP9.63□□□□□ -0.87
PTPN12-210ENST00000464313 DDX11L8A8MPP1 907 aa9.62□□□□□ -0.87
PTPN12-210ENST00000464313 SMPD1P17405 629 aa9.62□□□□□ -0.87
PTPN12-210ENST00000464313 FAM160A2Q8N612 972 aaPredicted RBP9.62□□□□□ -0.87
PTPN12-210ENST00000464313 THAP11Q96EK4 314 aa9.62□□□□□ -0.87
PTPN12-210ENST00000464313 DAXXQ9UER7 740 aaPredicted RBP9.62□□□□□ -0.87
PTPN12-210ENST00000464313 PRDM9Q9NQV7 894 aa9.61□□□□□ -0.87
PTPN12-210ENST00000464313 TESPA1A2RU30 521 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-210ENST00000464313 GNPATO15228 680 aa9.6□□□□□ -0.87
PTPN12-210ENST00000464313 GPR37O15354 613 aa9.6□□□□□ -0.87
PTPN12-210ENST00000464313 SLC27A5Q9Y2P5 690 aa9.6□□□□□ -0.87
PTPN12-210ENST00000464313 SNIP1Q8TAD8 396 aaKnown RBP9.59□□□□□ -0.87
PTPN12-210ENST00000464313 NXF1Q9UBU9 619 aaKnown RBP9.59□□□□□ -0.87
PTPN12-210ENST00000464313 FMNL1O95466 1100 aaPredicted RBP9.58□□□□□ -0.88
PTPN12-210ENST00000464313 ATP6V1AP38606 617 aa9.58□□□□□ -0.88
PTPN12-210ENST00000464313 PHOX2BQ99453 314 aa9.58□□□□□ -0.88
PTPN12-210ENST00000464313 GCGRP47871 477 aa9.57□□□□□ -0.88
PTPN12-210ENST00000464313 IRF7Q92985 503 aa9.57□□□□□ -0.88
PTPN12-210ENST00000464313 WNT7AO00755 349 aa9.55□□□□□ -0.88
PTPN12-210ENST00000464313 ZBTB24O43167 697 aaPredicted RBP9.55□□□□□ -0.88
PTPN12-210ENST00000464313 BRICD5Q6PL45 260 aa9.55□□□□□ -0.88
PTPN12-210ENST00000464313 RNF19BQ6ZMZ0 732 aa9.55□□□□□ -0.88
PTPN12-210ENST00000464313 J3QL48 77 aa9.54□□□□□ -0.88
PTPN12-210ENST00000464313 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
PTPN12-210ENST00000464313 SMYD5Q6GMV2 418 aa9.53□□□□□ -0.88
PTPN12-210ENST00000464313 NPAS3Q8IXF0 933 aa9.53□□□□□ -0.88
PTPN12-210ENST00000464313 HPS1Q92902 700 aa9.53□□□□□ -0.88
PTPN12-210ENST00000464313 SULF1Q8IWU6 871 aa9.52□□□□□ -0.89
PTPN12-210ENST00000464313 TPRNQ4KMQ1 711 aa9.5□□□□□ -0.89
PTPN12-210ENST00000464313 MRGPRX2Q96LB1 330 aa9.5□□□□□ -0.89
PTPN12-210ENST00000464313 SALL2Q9Y467 1007 aaPredicted RBP9.5□□□□□ -0.89
PTPN12-210ENST00000464313 VEGFBP49765 207 aa9.49□□□□□ -0.89
PTPN12-210ENST00000464313 MSS51Q4VC12 460 aa9.49□□□□□ -0.89
PTPN12-210ENST00000464313 KCTD17Q8N5Z5 321 aa9.49□□□□□ -0.89
PTPN12-210ENST00000464313 H3BM21 787 aa9.47□□□□□ -0.89
PTPN12-210ENST00000464313 GPIHBP1Q8IV16 184 aa9.46□□□□□ -0.9
PTPN12-210ENST00000464313 ERBB4Q15303 1308 aa9.46□□□□□ -0.9
PTPN12-210ENST00000464313 KCNMA1Q12791 1236 aa9.45□□□□□ -0.9
PTPN12-210ENST00000464313 TRIM32Q13049 653 aa9.45□□□□□ -0.9
PTPN12-210ENST00000464313 GRIPAP1Q4V328 841 aa9.44□□□□□ -0.9
PTPN12-210ENST00000464313 MMP16P51512 607 aa9.43□□□□□ -0.9
PTPN12-210ENST00000464313 HLA-CQ95604 372 aa9.43□□□□□ -0.9
PTPN12-210ENST00000464313 CD46P15529 392 aa9.42□□□□□ -0.9
PTPN12-210ENST00000464313 Q3C1V9 767 aa9.42□□□□□ -0.9
PTPN12-210ENST00000464313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPN12-210ENST00000464313 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
PTPN12-210ENST00000464313 GSK3AP49840 483 aa9.41□□□□□ -0.9
PTPN12-210ENST00000464313 DXOO77932 396 aaKnown RBP9.4□□□□□ -0.9
PTPN12-210ENST00000464313 CCDC24Q8N4L8 307 aa9.4□□□□□ -0.9
PTPN12-210ENST00000464313 USB1Q9BQ65 265 aaKnown RBP9.4□□□□□ -0.9
PTPN12-210ENST00000464313 KDM4AO75164 1064 aa9.39□□□□□ -0.91
PTPN12-210ENST00000464313 TRIM46Q7Z4K8 759 aa9.38□□□□□ -0.91
PTPN12-210ENST00000464313 TULP1O00294 542 aaPredicted RBP9.37□□□□□ -0.91
PTPN12-210ENST00000464313 BMP1P13497 986 aa9.37□□□□□ -0.91
PTPN12-210ENST00000464313 SKOR1P84550 965 aa9.37□□□□□ -0.91
PTPN12-210ENST00000464313 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
PTPN12-210ENST00000464313 GUCA2AQ02747 115 aa9.36□□□□□ -0.91
PTPN12-210ENST00000464313 RC3H1Q5TC82 1133 aaKnown RBP9.36□□□□□ -0.91
PTPN12-210ENST00000464313 TMEM151AQ8N4L1 468 aa9.36□□□□□ -0.91
PTPN12-210ENST00000464313 MAP2K5Q13163 448 aa9.35□□□□□ -0.91
PTPN12-210ENST00000464313 HOXA2O43364 376 aa9.33□□□□□ -0.92
PTPN12-210ENST00000464313 ALDH1A1P00352 501 aa9.33□□□□□ -0.92
PTPN12-210ENST00000464313 SYMPKQ92797 1274 aaKnown RBP9.33□□□□□ -0.92
PTPN12-210ENST00000464313 IRF6O14896 467 aa9.32□□□□□ -0.92
PTPN12-210ENST00000464313 CAPN5O15484 640 aaPredicted RBP9.32□□□□□ -0.92
PTPN12-210ENST00000464313 GDF11O95390 407 aa9.32□□□□□ -0.92
PTPN12-210ENST00000464313 USP46P62068 366 aa9.31□□□□□ -0.92
PTPN12-210ENST00000464313 WNT7BP56706 349 aa9.3□□□□□ -0.92
PTPN12-210ENST00000464313 RASSF7Q02833 373 aa9.3□□□□□ -0.92
PTPN12-210ENST00000464313 JUNDP17535 347 aa9.29□□□□□ -0.92
PTPN12-210ENST00000464313 PTCRAQ6ISU1 281 aaPredicted RBP9.29□□□□□ -0.92
PTPN12-210ENST00000464313 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
PTPN12-210ENST00000464313 VSIG8P0DPA2 414 aa9.28□□□□□ -0.92
PTPN12-210ENST00000464313 ZFP42Q96MM3 310 aa9.28□□□□□ -0.92
PTPN12-210ENST00000464313 CCDC102AQ96A19 550 aa9.27□□□□□ -0.93
PTPN12-210ENST00000464313 MINK1Q8N4C8 1332 aaPredicted RBP9.26□□□□□ -0.93
PTPN12-210ENST00000464313 NUDT12Q9BQG2 462 aa9.25□□□□□ -0.93
PTPN12-210ENST00000464313 FAM217BQ9NTX9 383 aaPredicted RBP9.25□□□□□ -0.93
PTPN12-210ENST00000464313 SIAH2O43255 324 aa9.24□□□□□ -0.93
PTPN12-210ENST00000464313 EHBP1Q8NDI1 1231 aa9.24□□□□□ -0.93
PTPN12-210ENST00000464313 GPCPD1Q9NPB8 672 aa9.24□□□□□ -0.93
PTPN12-210ENST00000464313 XP32Q5T750 250 aa9.23□□□□□ -0.93
PTPN12-210ENST00000464313 RETREG3Q86VR2 466 aa9.23□□□□□ -0.93
PTPN12-210ENST00000464313 NUTM1Q86Y26 1132 aa9.23□□□□□ -0.93
PTPN12-210ENST00000464313 WASF2Q9Y6W5 498 aa9.23□□□□□ -0.93
PTPN12-210ENST00000464313 RNF225M0QZC1 329 aaPredicted RBP9.22□□□□□ -0.93
PTPN12-210ENST00000464313 PCDHGC3Q9UN70 934 aa9.22□□□□□ -0.93
PTPN12-210ENST00000464313 CLCN1P35523 988 aa9.21□□□□□ -0.94
PTPN12-210ENST00000464313 C6orf229H3BNL8 230 aa9.2□□□□□ -0.94
PTPN12-210ENST00000464313 FDX1P10109 184 aa9.2□□□□□ -0.94
PTPN12-210ENST00000464313 SH3BP2P78314 561 aa9.2□□□□□ -0.94
PTPN12-210ENST00000464313 ZMYND10O75800 440 aa9.19□□□□□ -0.94
PTPN12-210ENST00000464313 MS4A1P11836 297 aa9.18□□□□□ -0.94
PTPN12-210ENST00000464313 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms