RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 HFM1A2PYH4 1435 aa21.93■■□□□ 1.1
SMC1A-204ENST00000463684 ATRNO75882 1429 aa21.93■■□□□ 1.1
SMC1A-204ENST00000463684 KIF1BO60333 1816 aa21.9■■□□□ 1.1
SMC1A-204ENST00000463684 FOXO3O43524 673 aa21.89■■□□□ 1.09
SMC1A-204ENST00000463684 GJD4Q96KN9 370 aaPredicted RBP21.88■■□□□ 1.09
SMC1A-204ENST00000463684 PRAG1Q86YV5 1406 aa21.88■■□□□ 1.09
SMC1A-204ENST00000463684 LRPPRCP42704 1394 aaKnown RBP21.87■■□□□ 1.09
SMC1A-204ENST00000463684 MYOM2P54296 1465 aa21.86■■□□□ 1.09
SMC1A-204ENST00000463684 BCL9LQ86UU0 1499 aa21.86■■□□□ 1.09
SMC1A-204ENST00000463684 XPCQ01831 940 aaPredicted RBP21.86■■□□□ 1.09
SMC1A-204ENST00000463684 COL22A1Q8NFW1 1626 aaPredicted RBP21.86■■□□□ 1.09
SMC1A-204ENST00000463684 SLC4A1APQ9BWU0 796 aaKnown RBP21.84■■□□□ 1.09
SMC1A-204ENST00000463684 NAIPQ13075 1403 aa21.83■■□□□ 1.09
SMC1A-204ENST00000463684 NUTM2FA1L443 756 aa21.82■■□□□ 1.08
SMC1A-204ENST00000463684 PXDNQ92626 1479 aa21.82■■□□□ 1.08
SMC1A-204ENST00000463684 UNC5CLQ8IV45 518 aa21.81■■□□□ 1.08
SMC1A-204ENST00000463684 STK26Q9P289 416 aa21.81■■□□□ 1.08
SMC1A-204ENST00000463684 EP400Q96L91 3159 aa21.8■■□□□ 1.08
SMC1A-204ENST00000463684 CDC42BPGQ6DT37 1551 aa21.79■■□□□ 1.08
SMC1A-204ENST00000463684 WAPLQ7Z5K2 1190 aa21.79■■□□□ 1.08
SMC1A-204ENST00000463684 SF3B2Q13435 895 aaKnown RBP21.77■■□□□ 1.08
SMC1A-204ENST00000463684 BLMP54132 1417 aaPredicted RBP21.76■■□□□ 1.07
SMC1A-204ENST00000463684 SPATA31A3Q5VYP0 1347 aa21.76■■□□□ 1.07
SMC1A-204ENST00000463684 ADGRF5Q8IZF2 1346 aa21.76■■□□□ 1.07
SMC1A-204ENST00000463684 HAP1P54257 671 aaPredicted RBP21.75■■□□□ 1.07
SMC1A-204ENST00000463684 RGL3Q3MIN7 710 aa21.75■■□□□ 1.07
SMC1A-204ENST00000463684 KRT28Q7Z3Y7 464 aa21.74■■□□□ 1.07
SMC1A-204ENST00000463684 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
SMC1A-204ENST00000463684 RALGAPBQ86X10 1494 aa21.73■■□□□ 1.07
SMC1A-204ENST00000463684 PPLO60437 1756 aa21.73■■□□□ 1.07
SMC1A-204ENST00000463684 SLIT2O94813 1529 aa21.72■■□□□ 1.07
SMC1A-204ENST00000463684 TMEM132EQ6IEE7 984 aa21.72■■□□□ 1.07
SMC1A-204ENST00000463684 ABCC11Q96J66 1382 aa21.72■■□□□ 1.07
SMC1A-204ENST00000463684 MARF1Q9Y4F3 1742 aaKnown RBP21.72■■□□□ 1.07
SMC1A-204ENST00000463684 PSME1Q06323 249 aa21.71■■□□□ 1.07
SMC1A-204ENST00000463684 SEPT12Q8IYM1 358 aa21.71■■□□□ 1.07
SMC1A-204ENST00000463684 CCDC144AA2RUR9 1427 aa21.71■■□□□ 1.07
SMC1A-204ENST00000463684 TECPR2O15040 1411 aa21.71■■□□□ 1.07
SMC1A-204ENST00000463684 DEFB132Q7Z7B7 95 aa21.7■■□□□ 1.06
SMC1A-204ENST00000463684 CCDC9Q9Y3X0 531 aaKnown RBP21.7■■□□□ 1.06
SMC1A-204ENST00000463684 ANKRD30BQ9BXX2 1392 aa21.7■■□□□ 1.06
SMC1A-204ENST00000463684 VPS72Q15906 364 aa21.68■■□□□ 1.06
SMC1A-204ENST00000463684 PLEKHH1Q9ULM0 1364 aa21.68■■□□□ 1.06
SMC1A-204ENST00000463684 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.67■■□□□ 1.06
SMC1A-204ENST00000463684 GLI3P10071 1580 aa21.67■■□□□ 1.06
SMC1A-204ENST00000463684 PHF8Q9UPP1 1060 aa21.67■■□□□ 1.06
SMC1A-204ENST00000463684 PLEKHG5O94827 1062 aa21.66■■□□□ 1.06
SMC1A-204ENST00000463684 CABLES1Q8TDN4 633 aa21.66■■□□□ 1.06
SMC1A-204ENST00000463684 ONECUT3O60422 494 aaPredicted RBP21.65■■□□□ 1.06
SMC1A-204ENST00000463684 LMOD2Q6P5Q4 547 aa21.65■■□□□ 1.06
SMC1A-204ENST00000463684 KRT27Q7Z3Y8 459 aa21.65■■□□□ 1.06
SMC1A-204ENST00000463684 SIRT1Q96EB6 747 aa21.65■■□□□ 1.06
SMC1A-204ENST00000463684 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
SMC1A-204ENST00000463684 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
SMC1A-204ENST00000463684 KIF1AQ12756 1690 aa21.63■■□□□ 1.05
SMC1A-204ENST00000463684 USP32Q8NFA0 1604 aa21.62■■□□□ 1.05
SMC1A-204ENST00000463684 A0A0G2JS52 829 aa21.62■■□□□ 1.05
SMC1A-204ENST00000463684 MYT1Q01538 1121 aa21.62■■□□□ 1.05
SMC1A-204ENST00000463684 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
SMC1A-204ENST00000463684 FMN2Q9NZ56 1722 aa21.6■■□□□ 1.05
SMC1A-204ENST00000463684 BAG6P46379 1132 aa21.6■■□□□ 1.05
SMC1A-204ENST00000463684 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
SMC1A-204ENST00000463684 ARHGEF10O15013 1369 aa21.6■■□□□ 1.05
SMC1A-204ENST00000463684 PIK3C2GO75747 1445 aa21.59■■□□□ 1.05
SMC1A-204ENST00000463684 MPHOSPH9Q99550 1183 aa21.59■■□□□ 1.05
SMC1A-204ENST00000463684 FAM83GA6ND36 823 aa21.58■■□□□ 1.05
SMC1A-204ENST00000463684 C14orf93Q9H972 538 aaKnown RBP21.58■■□□□ 1.05
SMC1A-204ENST00000463684 DHX57Q6P158 1386 aaKnown RBP21.58■■□□□ 1.04
SMC1A-204ENST00000463684 KNDC1Q76NI1 1749 aa21.58■■□□□ 1.04
SMC1A-204ENST00000463684 SAFB2Q14151 953 aaKnown RBP eCLIP21.56■■□□□ 1.04
SMC1A-204ENST00000463684 BRWD3Q6RI45 1802 aa21.56■■□□□ 1.04
SMC1A-204ENST00000463684 PSDA5PKW4 1024 aaPredicted RBP21.55■■□□□ 1.04
SMC1A-204ENST00000463684 PMFBP1Q8TBY8 1022 aa21.55■■□□□ 1.04
SMC1A-204ENST00000463684 PRAM1Q96QH2 718 aa21.55■■□□□ 1.04
SMC1A-204ENST00000463684 NRXN1Q9ULB1 1477 aa21.54■■□□□ 1.04
SMC1A-204ENST00000463684 FAM98CQ17RN3 349 aaKnown RBP21.54■■□□□ 1.04
SMC1A-204ENST00000463684 CFAP70Q5T0N1 1121 aa21.53■■□□□ 1.04
SMC1A-204ENST00000463684 BTG4Q9NY30 223 aa21.53■■□□□ 1.04
SMC1A-204ENST00000463684 POGKQ9P215 609 aa21.53■■□□□ 1.04
SMC1A-204ENST00000463684 NWD2Q9ULI1 1742 aa21.52■■□□□ 1.03
SMC1A-204ENST00000463684 HRCP23327 699 aa21.51■■□□□ 1.03
SMC1A-204ENST00000463684 IFT172Q9UG01 1749 aa21.51■■□□□ 1.03
SMC1A-204ENST00000463684 PLCH1Q4KWH8 1693 aa21.5■■□□□ 1.03
SMC1A-204ENST00000463684 LRP5O75197 1615 aa21.49■■□□□ 1.03
SMC1A-204ENST00000463684 EN1Q05925 392 aaPredicted RBP21.49■■□□□ 1.03
SMC1A-204ENST00000463684 GPRASP1Q5JY77 1395 aa21.48■■□□□ 1.03
SMC1A-204ENST00000463684 ANKARQ7Z5J8 1434 aa21.47■■□□□ 1.03
SMC1A-204ENST00000463684 RGPD8O14715 1765 aaPredicted RBP21.46■■□□□ 1.03
SMC1A-204ENST00000463684 FAM182BQ5T319 152 aa21.45■■□□□ 1.02
SMC1A-204ENST00000463684 R3HDM1Q15032 1099 aaKnown RBP21.44■■□□□ 1.02
SMC1A-204ENST00000463684 ACIN1Q9UKV3 1341 aaKnown RBP21.44■■□□□ 1.02
SMC1A-204ENST00000463684 HIRIP3Q9BW71 556 aaPredicted RBP21.43■■□□□ 1.02
SMC1A-204ENST00000463684 SPATA31A5Q5VU36 1347 aa21.43■■□□□ 1.02
SMC1A-204ENST00000463684 SPATA31A7Q8IWB4 1347 aa21.43■■□□□ 1.02
SMC1A-204ENST00000463684 PAK3O75914 559 aaPredicted RBP21.42■■□□□ 1.02
SMC1A-204ENST00000463684 EIF3AQ14152 1382 aaKnown RBP21.42■■□□□ 1.02
SMC1A-204ENST00000463684 ABCA3Q99758 1704 aa21.42■■□□□ 1.02
SMC1A-204ENST00000463684 NGDNQ8NEJ9 315 aaKnown RBP21.41■■□□□ 1.02
SMC1A-204ENST00000463684 TRAK1Q9UPV9 953 aa21.41■■□□□ 1.02
SMC1A-204ENST00000463684 MINK1Q8N4C8 1332 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms